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1. Field sampling
2. Common garden acclimation 3. Physiology studies
Desert Cool montane Cold montane
Common garden 1
(optimum, N=315)
Animal performance
• Thermal tolerance
• Thermal preference
• Swimming
• Growth
• Behavior
3 ecotypes × 3 water temperatures (in triplicate)
Trout mechanisms: common garden research
Zhongqi Chen1,*, Brian Small1, Christopher Caudill1, Jon Masingale1, Shawn Narum2, Ronald Hardy1
1 University of Idaho; 2 Columbia River Inter-Tribal Fish Commission * [email protected]
Growth study (12-16 weeks)
• Growth performance & efficiency
Maturation and Fecundity
• Egg size & number
• Reproductive physiology
Desert Cool montane Cold montane
This project was supported by NSF award number OIA-1757324 from the NSF Idaho EPSCoR Program and by National Science Foundation. The authors thank Jeongwhui Hong, Tim Boyle, Seunghan Lee, Hossain Sakhawat and Yang Gang for their help in the field.
4. Genomic studies
Energetics
• Survival
• Swimming
• Feeding and digestion
Functional limitation
• Heart rate
• Gill surface area
• muscle
Cellular & molecular
• Mitochondria
• Enzyme activity
• Transcriptome
Whole genome resequencing
Discover candidate genes
• Population differentiation
• Trait association
• Thermal plasticity
Background
The goal of mechanism section is to identify genetic,
environmental, and phenotypic mechanisms that
translate to adaptive capacity of redband trout
(Oncorhynchus mykiss gairdneri) populations.
YEAR-1 & -2 Objectives include:
1. Collect fish from field for common garden acclimation
2. Quantify physiological responses to temperature
3. Conduct genome scan for candidate genes
Common garden 2
(sub-optimum, N=315)
Common garden 3
(stress, N=315)
15°C 19°C 23°C
Age-0 fish collected from natural streams
Cool Montane:(4) Keithley Creek(5) Whiskey Jack Creek(6) Trail Creek
Heart
Summary
Data generated from common
gardens will be used to compare
intraspecific differences in life
history traits and genotypes. It
can also be incorporated into
agent-based models to predict
adaptive capacity and
population densities under
climate change scenarios.
Desert:(1) Little Jacks Creek(2) Duncan Creek(3) William Creek
Cold Montane:(7) Upper Mann Creek(8) Fawn Creek (9) Callahan Creek
12
3
4
5
6
78
9