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RNA metabolism in uremic patients: Accumulation of modified ribonucleosides in uremic serum Technical Note TOSHIMITSU NIWA,NAOHITO TAKEDA, and HIDEO YOSHIZUMI Nagoya University Daiko Medical Center, and Meijo University Faculty of Pharmacy, Nagoya, Japan RNA metabolism in uremic patients: Accumulation of modified ribo- nucleosides in uremic serum. To determine the metabolism of ribonucleic acid (RNA) in uremia, serum and urine levels of ribonucleosides in uremic patients were analyzed using reversed-phase high-performance liquid chromatography. The serum levels of xanthosine and all modified ribo- nucleosides were increased in undialyzed patients with chronic renal failure (CRF), and patients undergoing hemodialysis (HD) and continu- ous ambulatory peritoneal dialysis (CAPD). The serum level of pseudouri- dine was markedly increased in all the uremic patients especially CAPD patients (32 times higher than normal). By contrast, the serum level of adenosine did not show any significant change in the uremic patients. Interestingly, the serum and urine levels of inosine were significantly decreased in all the uremic patients, suggesting that the production of inosine is decreased in uremic patients. The serum level of uridine was significantly elevated only in the HD patients. The serum levels of all ribonucleosides except inosine and uridine decreased significantly after HD. The urinary excretion of inosine, 1-methyladenosine, 1-methyl- guanosine, N 2 ,N 2 -dimethylguanosine and N 4 -acetylcytidine was signifi- cantly decreased in the CRF patients, leading to the accumulation of these modified ribonucleosides in the uremic serum. CAPD patients showed markedly increased serum levels of modified ribonucleosides such as pseudouridine, 1-methylinosine, and N 2 ,N 2 -dimethylguanosine and N 4 - acetylcytidine as compared with the HD patients. These results demon- strate that there was an altered metabolism of RNA in uremic patients with marked accumulation of modified ribonucleosides. Uremia is an end-stage renal disorder characterized by various uremic symptoms, which are thought to be caused by accumula- tion of uremic toxins circulating in the blood. Uremic toxins include low- to high-molecular-weight substances that accumulate in blood because of renal insufficiency. With the advances in analytical techniques, a number of substances that accumulate in uremic blood have been identified and proposed as uremic toxins. However, nucleic acid metabolism in uremic patients has not been studied in detail, because of difficulties in their analysis. Ribonucleic acid (RNA) is an important biological component. Methylated purines and pyrimidines and the other modified ribonucleosides are derived from RNA, especially from transfer ribonucleic acid (tRNA). Since methylation occurs only after synthesis of the intact molecule, and no kinases have been found that will re-incorporate the monomer units into tRNA, the modified bases and ribonucleosides are excreted into urine fol- lowing metabolic degradation of tRNA molecules. Modified ribonucleosides have been shown to be excreted in abnormal amounts in the urine of patients with a variety of neoplastic diseases [1, 2]. Furthermore, urinary levels of the modified ribonucleosides have been suggested as useful markers for mon- itoring progress of disease and response to therapy. However, little is known about the changes in the concentration of modified ribonucleosides in the blood and urine of uremic patients except pseudouridine (5-ribosyluracil). Pseudouridine derived predomi- nantly from tRNA is not catabolized but excreted in urine as the intact molecule. The serum level of pseudouridine has been reported to be increased in uremic patients [3– 6], especially when they are undergoing continuous ambulatory peritoneal dialysis (CAPD) [4]. Further analytical study on the metabolism of modified ribonucleosides in uremic patients is required to shed light on their possible roles as uremic toxins. To determine RNA metabolism in uremic patients and the effects of hemodialysis (HD) and CAPD on the metabolism, we developed a simple high-performance liquid chromatography (HPLC) method to measure the serum and urine levels of ribonucleosides in uremic undialyzed patients, HD patients and CAPD patients. METHODS Chemicals Pseudouridine (C), 1-methyladenosine (m 1 A), 1-methylinosine (m 1 I), 1-methylguanosine (m 1 G), N 4 -acetylcytidine (ac 4 C), N 2 - methylguanosine (m 2 G), adenosine (A), N 6 -methyladenosine (m 6 A), allopurinol ribonucleoside (APR), 3-methyluridine (m 3 U) and 5-bromouridine (br 5 U) were obtained from Sigma Chemical Co. (St. Louis, MO, USA). Uridine (U), guanosine (G) and cytidine (C) were obtained from Kohjin Co. (Tokyo, Japan), and xanthosine (X) from Nakarai Chemical Co. (Kyoto, Japan). Inosine (I) was obtained from Wako Pure Chemical Co. (Osaka, Japan). N 2 ,N 2 -Dimethylguanosine (m 2 2 G) was a gift from Dr. Yamazaki (Ajinomoto Co., Kanagawa, Japan). N 6 -Threonylcar- bamoyladenosine (t 6 A) was synthesized according to the method of Chheda and Hong [7]. Key words: RNA, ribonucleoside, uremia, hemodialysis, peritoneal dialy- sis, pseudouridine. Received for publication October 24, 1997 and in revised form January 5, 1998 Accepted for publication January 5, 1998 © 1998 by the International Society of Nephrology Kidney International, Vol. 53 (1998), pp. 1801–1806 1801

RNA metabolism in uremic patients: Accumulation of modified ribonucleosides in uremic serum Technical Note

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Page 1: RNA metabolism in uremic patients: Accumulation of modified ribonucleosides in uremic serum Technical Note

RNA metabolism in uremic patients: Accumulation of modifiedribonucleosides in uremic serumTechnical Note

TOSHIMITSU NIWA, NAOHITO TAKEDA, and HIDEO YOSHIZUMI

Nagoya University Daiko Medical Center, and Meijo University Faculty of Pharmacy, Nagoya, Japan

RNA metabolism in uremic patients: Accumulation of modified ribo-nucleosides in uremic serum. To determine the metabolism of ribonucleicacid (RNA) in uremia, serum and urine levels of ribonucleosides in uremicpatients were analyzed using reversed-phase high-performance liquidchromatography. The serum levels of xanthosine and all modified ribo-nucleosides were increased in undialyzed patients with chronic renalfailure (CRF), and patients undergoing hemodialysis (HD) and continu-ous ambulatory peritoneal dialysis (CAPD). The serum level of pseudouri-dine was markedly increased in all the uremic patients especially CAPDpatients (32 times higher than normal). By contrast, the serum level ofadenosine did not show any significant change in the uremic patients.Interestingly, the serum and urine levels of inosine were significantlydecreased in all the uremic patients, suggesting that the production ofinosine is decreased in uremic patients. The serum level of uridine wassignificantly elevated only in the HD patients. The serum levels of allribonucleosides except inosine and uridine decreased significantly afterHD. The urinary excretion of inosine, 1-methyladenosine, 1-methyl-guanosine, N2,N2-dimethylguanosine and N4-acetylcytidine was signifi-cantly decreased in the CRF patients, leading to the accumulation of thesemodified ribonucleosides in the uremic serum. CAPD patients showedmarkedly increased serum levels of modified ribonucleosides such aspseudouridine, 1-methylinosine, and N2,N2-dimethylguanosine and N4-acetylcytidine as compared with the HD patients. These results demon-strate that there was an altered metabolism of RNA in uremic patientswith marked accumulation of modified ribonucleosides.

Uremia is an end-stage renal disorder characterized by variousuremic symptoms, which are thought to be caused by accumula-tion of uremic toxins circulating in the blood. Uremic toxinsinclude low- to high-molecular-weight substances that accumulatein blood because of renal insufficiency. With the advances inanalytical techniques, a number of substances that accumulate inuremic blood have been identified and proposed as uremic toxins.However, nucleic acid metabolism in uremic patients has not beenstudied in detail, because of difficulties in their analysis.

Ribonucleic acid (RNA) is an important biological component.Methylated purines and pyrimidines and the other modified

ribonucleosides are derived from RNA, especially from transferribonucleic acid (tRNA). Since methylation occurs only aftersynthesis of the intact molecule, and no kinases have been foundthat will re-incorporate the monomer units into tRNA, themodified bases and ribonucleosides are excreted into urine fol-lowing metabolic degradation of tRNA molecules. Modifiedribonucleosides have been shown to be excreted in abnormalamounts in the urine of patients with a variety of neoplasticdiseases [1, 2]. Furthermore, urinary levels of the modifiedribonucleosides have been suggested as useful markers for mon-itoring progress of disease and response to therapy. However,little is known about the changes in the concentration of modifiedribonucleosides in the blood and urine of uremic patients exceptpseudouridine (5-ribosyluracil). Pseudouridine derived predomi-nantly from tRNA is not catabolized but excreted in urine as theintact molecule. The serum level of pseudouridine has beenreported to be increased in uremic patients [3–6], especially whenthey are undergoing continuous ambulatory peritoneal dialysis(CAPD) [4]. Further analytical study on the metabolism ofmodified ribonucleosides in uremic patients is required to shedlight on their possible roles as uremic toxins.

To determine RNA metabolism in uremic patients and theeffects of hemodialysis (HD) and CAPD on the metabolism, wedeveloped a simple high-performance liquid chromatography(HPLC) method to measure the serum and urine levels ofribonucleosides in uremic undialyzed patients, HD patients andCAPD patients.

METHODS

Chemicals

Pseudouridine (C), 1-methyladenosine (m1A), 1-methylinosine(m1I), 1-methylguanosine (m1G), N4-acetylcytidine (ac4C), N2-methylguanosine (m2G), adenosine (A), N6-methyladenosine(m6A), allopurinol ribonucleoside (APR), 3-methyluridine (m3U)and 5-bromouridine (br5U) were obtained from Sigma ChemicalCo. (St. Louis, MO, USA). Uridine (U), guanosine (G) andcytidine (C) were obtained from Kohjin Co. (Tokyo, Japan), andxanthosine (X) from Nakarai Chemical Co. (Kyoto, Japan).Inosine (I) was obtained from Wako Pure Chemical Co. (Osaka,Japan). N2,N2-Dimethylguanosine (m2

2G) was a gift from Dr.Yamazaki (Ajinomoto Co., Kanagawa, Japan). N6-Threonylcar-bamoyladenosine (t6A) was synthesized according to the methodof Chheda and Hong [7].

Key words: RNA, ribonucleoside, uremia, hemodialysis, peritoneal dialy-sis, pseudouridine.

Received for publication October 24, 1997and in revised form January 5, 1998Accepted for publication January 5, 1998

© 1998 by the International Society of Nephrology

Kidney International, Vol. 53 (1998), pp. 1801–1806

1801

Page 2: RNA metabolism in uremic patients: Accumulation of modified ribonucleosides in uremic serum Technical Note

Patients

Serum samples were obtained from 10 healthy subjects (5 malesand 5 females), 11 undialyzed patients with chronic renal failure(CRF; 6 males and 5 females), 17 uremic patients on HD (9 malesand 8 females), and 14 uremic patients on CAPD (5 males and 9females). Serum levels of creatinine in the healthy subjects andthe patients are listed in Table 1. Nutritional status of all thepatients was good from the viewpoint of serum albumin (3.9 6 0.3g/dl, mean 6 SD; range 3.5 to 4.5 g/dl). Four patients on HD werecomplicated with diabetes mellitus. Hemodialysis was performedusing cellulose triacetate (FB-130U; Nipro, Osaka, Japan) dialyz-ers for four hours three times a week. CAPD was performed byexchanging 2 liters of dialysate (Dianeal 1.36; Baxter, RoundLake, IL, USA) four times a day.

Analysis of ribonucleosides

The serum sample (1 ml) in a microsample tube (1.5 ml volume;Eppendolf) was mixed with m3U (20 nmol) as an internalstandard, and subsequently deproteinized using ultrafiltrationwith a membrane filter (Centricut mini V-20, cut-off molecularweight, 20 kDa; Kurashiki-boseki Co., Okayama, Japan) for 3 to 4hours by centrifugation at 2000 3 g. The ultrafiltrate was trans-ferred into another microsample tube, and then mixed with 250 mlof 2.5 M ammonium acetate (pH 9.0). The mixed solution wasapplied into a pretreated boronate gel (Affi-Gel 601; Bio-Rad,Richmond, CA, USA) column (55 mm 3 5 mm i.d.). Afterwashing the microsample tube with 500 ml of 0.25 M ammoniumacetate (pH 8.8), the washing solution was also applied to the gelcolumn. The column was washed with 3 ml of 0.25 M ammoniumacetate (pH 8.8) followed by 0.3 ml of methanol/water (1:1,vol/vol). Ribonucleosides were eluted from the column with 5 ml

of 0.04 M formic acid in methanol/water (1:1, vol/vol). The eluatewas lyophilized to dryness. The residue was dissolved in 100 ml of0.1 M ammonium acetate (pH 6.0), and ultrafiltrated with amembrane filter (Centricut super-mini W-MO, pore size0.45 mm). The ultrafiltrate (20 ml) was analyzed by HPLC.

Urine sample (250 ml) in a microsample tube (1.5 ml volume;Eppendolf) was mixed with br5U (10 nmol) as an internalstandard and 100 ml of 2.5 M ammonium acetate (pH 9.0). Themixed solution was applied into the pretreated boronate gelcolumn. After washing the microsample tube with 500 ml of 0.25M ammonium acetate (pH 8.8), the washing solution was alsoapplied to the gel column. The following procedures were thesame as for the serum samples.

For pretreatment of the boronate gel column, boronate gel (1 g;Affi-Gel 601) was washed 10 times alternatively with methanoland water, and then packed into a minicolumn (55 mm 3 5 mmi.d., miniature champagne columns 4 ml reservoir; Supelco Co.,Bellefonte, PA, USA) with a glass wool in the bottom. Afterwashing with 15 ml of 0.25 M ammonium acetate (pH 8.8), thecolumn was used for the isolation of ribonucleosides.

The chromatograph apparatus (Toyo Soda, Tokyo, Japan)consisted of a Model CCP controller PX-8010, a Model CCPDdual pump, a Model GE-8000 gradienter, a Model MX-8010mixer, a Model ERC-3415 degasser, a Model UV-8000 ultraviolet

Table 1. Serum levels of ribonucleosides in healthy subjects and uremic patients

NNormal

10CRF

11

HD

CAPD14

ANOVAP value

Before17

After17

Major ribonucleosides andtheir metabolitesnmol/literA 130 6 20 140 6 40 220 6 50 110 6 20e 130 6 10 NSI 5000 6 800 1600 6 400b 3300 6 500a 2900 6 600a 3000 6 500a ,0.01X 84 6 15 340 6 70b 250 6 40b 150 6 20f 240 6 30b ,0.01U 5000 6 400 6200 6 800 7000 6 600a 7300 6 600a 5100 6 500c ,0.05

Modified ribonucleosidesnmol/literC 1700 6 100 29000 6 5000b 28000 6 2000b 12000 6 1000af 55000 6 6000bd ,0.01m1A 61 6 6 220 6 430b 370 6 50b 150 6 10f 310 6 10b ,0.01m6A 66 6 10 250 6 60b 250 6 40b 130 6 20f 180 6 30 ,0.01t6A 94 6 24 590 6 130b 1000 6 100b 280 6 30f 700 6 50bd ,0.01m1I 48 6 14 880 6 130b 1200 6 100b 570 6 40bf 2200 6 200bd ,0.01m1G 46 6 19 99 6 21 140 6 20b 78 6 10f 120 6 20b ,0.01m2

2G 29 6 5 440 6 90b 570 6 50b 270 6 30af 760 6 80bc ,0.01ac4C 200 6 20 250 6 30 350 6 40b 150 6 10f 560 6 30bd ,0.01

Serum creatininemmol/liter

78 6 3 840 6 150 1010 6 50b 430 6 20f 860 6 60 ,0.01

Abbreviations are: A, adenosine; ac4C, N4-acetylcytidine; I, inosine; m1A, 1-methyladenosine; m1G, 1-methylguanosine; m1I, 1-methylinosine; m22G,

N2,N2-dimethylguanosine; m6A, N6-methyladenosine; t6A, N6-threonylcarbamoyladenosine; U, uridine; X, xanthosine; C, pseudouridine.a P , 0.05, b P , 0.01 vs. normal by Fisher’s PLSD testc P , 0.05, d P , 0.01 vs. before HD by Fisher’s PLSD test for comparison between before HD and CAPDe P , 0.05, f P , 0.01 as compared with before HD by paired t-test

Table 2. The mobile phase consisting of solution (A) (0.1 Mammonium acetate, pH 6.0) and solution (B) (methanol/water, 40:60,

vol/vol)

Time min 0 3 5 25 30 34 37 45 48 53%B 0 0 10 25 50 75 75 100 100 0

Niwa et al: Ribonucleosides in uremia1802

Page 3: RNA metabolism in uremic patients: Accumulation of modified ribonucleosides in uremic serum Technical Note

detector, a Model Chromatopack C-R64 (Shimadzu, Kyoto, Ja-pan), and a reverse phase column (Develosil ODS-UG-5, 250mm 3 4.6 mm I.D.; Nomura Chemical Co., Aichi, Japan) with aguard column (Develosil ODS-UG-5, 30 mm 3 4.6 mm I.D.). Themobile phase, consisting of solution (A) (0.1 M ammoniumacetate, pH 6.0) and solution (B) (methanol/water, 40:60, vol/vol),was delivered at a flow rate of 1 ml/min at ambient temperature.The mobile phase was programmed (Table 2), and the eluate wasmonitored by detecting ultraviolet at 254 nm.

Calibration was done using standard solutions containing ribo-nucleosides in distilled water at five different concentrations foreach ribonucleoside. The calibration lines showed strong correla-tions (r ^ 0.999).

Identification of ribonucleosides was confirmed by liquid chro-

matography/mass spectrometry (LC/MS) with frit-fast atom bom-bardment (FAB) [8, 9].

Statistical analysis

Results are expressed as the mean 6 SE. Statistical analysis wasdone using analysis of variance (ANOVA) for multiple compari-son, unpaired t-test for two groups between normal subjects andCRF patients, and paired t-test for two groups between beforeand after HD. Differences were considered statistically significantwhen the P value was less than 0.05.

RESULTS

Serum levels of ribonucleosides

Figure 1 shows the HPLC chromatograms of serum ribonucleo-

Fig. 1. High-performance liquid chromatography (HPLC) of serum ribonucleosides in a healthy subject (A), a chronic renal failure (CRF) patient (B),a hemodialysis (HD) patient, (C) and a continuous ambulatory peritoneal dialysis (CAPD) patient (D). The peaks were identified as follows: (1.)5,6-dihydrouridine (D); (2.) pseudouridine (C); (3.) cytidine (C); (4.) 3-(3-amino-3-carboxypropyl)uridine (acp3U); (5.) uridine (U); (6.) 1-methylad-enosine (m1A); (7.) xanthosine (X); (9.) inosine (I); (11.) 4-pyridone-3-carboxamide-N1-ribofuranoside (PCNR); (14.) 1-methylinosine (m1I); (15.)1-methylguanosine (m1G); (16.) N4-acetylcytidine (ac4C); (17.) N2-methylguanosine (m2G:); (18.) adenosine (A); (19.) N2,N2-dimethylguanosine (m2

2G);(20.) 5-methoxycarbonylmethyl-2-thiouridine (mcm5s2U); (21.) N6-threonylcarbamoyladenosine (t6A); (22.) N6-methyladenosine (m6A); (23.) N6-methyl-N6-threonylcarbamoyladenosine (mt6A). The abbreviation IS is the internal standard (3-methyluridine: m3U).

Niwa et al: Ribonucleosides in uremia 1803

Page 4: RNA metabolism in uremic patients: Accumulation of modified ribonucleosides in uremic serum Technical Note

sides in a healthy subject (a), a CRF patient (b), an HD patient (c)and a CAPD patient (D). The concentration of guanosine andcytidine in the serum and urine could not be determined usingHPLC because of their trace levels. Table 1 summarizes the serumlevels of ribonucleosides in healthy subjects and uremic patients.The serum levels of xanthosine and all modified ribonucleosideswere increased in CRF, HD and CAPD patients as compared withhealthy subjects. The serum levels of pseudouridine were mark-edly increased in all the uremic patients especially undergoingCAPD. However, the serum levels of adenosine did not show anysignificant change in the uremic patients compared with those inhealthy subjects. Interestingly, the serum level of inosine wassignificantly decreased in the uremic patients, especially CRFpatients. The serum level of uridine was significantly elevated onlyin HD patients. The serum levels of all ribonucleosides exceptinosine and uridine decreased significantly after HD.

CAPD patients showed significantly increased serum levels ofpseudouridine, m1I, m2

2G and ac4C, and decreased serum levels ofuridine and t6A as compared with HD patients. The molar ratio ofserum pseudouridine (mmol/liter) to serum creatinine (mmol/liter) in CAPD patients (0.068 6 0.01) was significantly (P , 0.01by Fisher’s PLSD test) increased as compared with those in HDpatients (pre-HD 0.028 6 0.002; post-HD 0.029 6 0.002), CRFpatients (0.037 6 0.002) and normal subjects (0.022 6 0.001;ANOVA, P , 0.01). There was no significant difference in theserum levels of pseudouridine between high and low transportersamong CAPD patients.

Table 3 shows the correlation coefficients between serum levelsof creatinine and ribonucleosides in CRF and all the dialysispatients. In CRF patients the serum levels of creatinine showedsignificantly positive correlation with pseudouridine (r 5 0.951),m1I, t6A and m2

2G, and also showed a tendency of positive

correlation with xanthosine and ac4C. In all the dialysis patients,pseudouridine was positively, but not equally well, correlated (r 50.446) with serum creatinine.

Urinary excretion of ribonucleosides

Figure 2 shows the HPLC chromatograms of urine ribonucleo-sides in a healthy subject (Fig. 2A) and a CRF patient (Fig. 2B).Table 4 summarizes urinary excretion of the ribonucleosides inhealthy subjects and CRF patients. Urinary excretion of inosine,m1A, m1G, m2

2G and ac4C was significantly decreased in the CRFpatients. Both urine and serum levels of inosine were decreased in

Fig. 2. HPLC chromatograms of urine ribonucleosides in a healthysubject (A) and a chronic renal failure patient (B). The peaks areidentified as follows: (1.) 5,6-dihydrouridine (D); (2.) pseudouridine (c);(3.) cytidine (C); (4.) 3-(3-amino-3-carboxypropyl)uridine (acp3U); (5.)uridine (U); (6.) 1-methyladenosine (m1A); (7.) xanthosine (X); (8.)7-methylguanine (m7Gua), (9.) inosine (I); (10.) 7-methylguanosine(m7G); (11.) 4-pyridone-3-carboxamide-N1-ribofuranoside (PCNR); (12.)guanosine (G); (13.) 3-methyluridine (m3U); (14.) 1-methylinosine (m1I);(15.) 1-methylguanosine (m1G); (16.) N4-acetylcytidine (ac4C); (17.) N2-methylguanosine (m2G:); (18.) adenosine (A); (19.) N2,N2-dimethyl-guanosine (m2

2G); (20.) 5-methoxycarbonylmethyl-2-thiouridine (mcm5

s2U); (21.) N6-threonylcarbamoyladenosine (t6A); (22.) N6-methylad-enosine (m6A); (23.) N6-methyl-N6-threonylcarbamoyladenosine (mt6A);(24.) N6-threonylcarbamoyl-2-methylthioadenosine (ms2t6A). Abbrevia-tion IS is the internal standard (5-bromouridine: br5U).

Table 3. Correlation between serum creatinine and serumribonucleosides in chronic renal failure (CRF) and dialysis patients

CRF(N 5 11)

Dialysis patients(before and after

HD, CAPD)(N 5 48)

r P r P

Major ribonucleosidesand theirmetabolitesA 20.05 NS 0.348 ,0.05I 0.131 NS 0.073 NSX 0.597 ,0.1 0.383 ,0.01U 0.352 NS 20.16 NS

ModifiedribonucleosidesC 0.951 ,0.01 0.446 ,0.01m1A 0.423 NS 0.46 ,0.01m6A 0.556 ,0.1 0.295 ,0.05t6A 0.92 ,0.01 0.726 ,0.01m1I 0.927 ,0.01 0.466 ,0.01m1G 0.615 ,0.1 0.314 ,0.05m2

2G 0.744 ,0.01 0.439 ,0.01ac4C 0.541 ,0.1 0.49 ,0.01

Abbreviations are: A, adenosine; ac4C, N4-acetylcytidine; I, inosine;m1A, 1-methyladenosine; m1G, 1-methylguanosine; m1I, 1-methylinosine;m2

2G, N2,N2-dimethylguanosine; N6A, N6-methyladenosine; t6A, N6-threo-nylcarbamoyladenosine; U, uridine; X, xanthosine; C, pseudouridine; NS,not significant.

Niwa et al: Ribonucleosides in uremia1804

Page 5: RNA metabolism in uremic patients: Accumulation of modified ribonucleosides in uremic serum Technical Note

the CRF patients, suggesting that the production of inosine inuremic patients is decreased. The decreased urinary excretion ofm1A, m1G, m2

2G and ac4C led to the accumulation of thesemodified ribonucleosides in the uremic serum.

DISCUSSION

We developed an HPLC method for quantification of serumand urine ribonucleosides, and demonstrated that the serumlevels of xanthosine and all modified ribonucleosides, especiallypseudouridine, were increased in uremic patients. Hemodialysisdecreased the serum levels of all the ribonucleosides exceptinosine and uridine. The serum levels of most modified ribo-nucleosides were significantly higher in CAPD patients than inHD patients. By contrast, there was no significant change in theserum levels of adenosine in the uremic patients. Interestingly, theserum and urine levels of inosine were rather low in uremicpatients.

The serum levels of pseudouridine were markedly elevated inuremic patients, especially CAPD patients (32 times higher thannormal), as reported previously [4]. The lower weekly creatinineclearance in CAPD patients than in HD patients cannot explainthe markedly increased serum levels of pseudouridine in CAPDpatients, because the molar ratio of serum pseudouridine tocreatinine was 2.4 times higher in CAPD patients as comparedwith HD patients. The marked increase in pseudouridine levels inCAPD patients can be explained by lower transport rate ofpseudouridine when compared with that of HD probably due toglucose-induced molecular self-association of pseudouridine inthe peritoneal membrane [10].

Pseudouridine is reported to inhibit basal and insulin-stimu-lated glucose utilization in isolated rat soleus muscle in vitro, andis considered to be responsible for insulin resistance in uremia[11–13]. Pseudouridine is a modified ribonucleoside originatingalmost exclusively from the catabolism of tRNA. Once releasedfrom tRNA, it is not reincorporated into the other molecules of

tRNA, and excreted into urine as an end product. Consequently,pseudouridine accumulates in uremic serum due to the impair-ment of its renal excretion and increased tubular reabsorption [5],but not due to the increased synthesis. We confirmed their results[5] that the serum level of pseudouridine was markedly increasedand its urinary excretion was slightly decreased in uremic patients.A marked increase of pseudouridine in cerebrospinal fluid wasalso observed in young uremic children [14], and was consideredto have some relationship with delayed cognitive development inthe patients. Further study is required to establish the role ofpseudouridine as a uremic toxin.

The serum levels of the other modified ribonucleosides werealso increased in uremic patients especially undergoing CAPD,and showed positive correlation with serum creatinine in CRFpatients. Since these modified nucleosides like pseudouridine arethe end products of RNA especially of tRNA and are notre-incorporated into newly synthesized RNA molecules, they arenormally excreted into urine. However, in uremia they accumulatein the blood due to their reduced renal clearance. By contrast, theserum levels of adenosine, uridine and inosine were not elevatedin uremic patients except uridine in HD patients, presumablybecause these major ribonucleoside can be re-utilized for thesynthesis of their phosphates. Xanthosine, a product from xanth-ylic acid, is metabolized into xanthine, followed by its conversioninto uric acid. Uric acid is normally excreted into urine, andaccumulates in uremic serum. The accumulation of uric acid inuremic serum may lead to elevation of serum xanthosine level.The serum level of uridine was elevated in HD patients, althoughthe mechanism is not clear. It is of note that uridine is demon-strated to act as a sleep-promoting substance by its intraventric-ular infusion or even by intraperitoneal infusion [15–17], and toinduce hyperthermia [18]. Thus, the increase of uridine levelcaused by HD may be related to sleep disorder and hyperthermiain HD patients.

In conclusion, our study demonstrates that there are extensivelyaltered metabolism of RNA-derived products with marked accu-mulation of modified ribonucleosides in uremic patients. How-ever, further studies are required to elucidate their role in thedevelopment of specific uremic symptoms.

ACKNOWLEDGMENTS

The authors are grateful to Ms. Mariko Usami and Ms. HisakoSugiyama for their skillful technical assistance.

Reprint requests to Toshimitsu Niwa, M.D., Nagoya University DaikoMedical Center, 1-1-20 Daiko-minami, Higashi-ku, Nagoya 461, Japan.E-mail: [email protected]

APPENDIX

Abbreviations used in this paper are: A, adenosine; ac4C, N4-acetylcy-tidine; acp3U, 3-(3-amino-3-carboxypropyl)uridine; br5U, 5-bromouri-dine; C, cytidine; CAPD, continuous ambulatory peritoneal dialysis; CRF,chronic renal failure; D, 5,6-dihydrouridine; FAB, fast atom bombard-ment; G, guanosine; HD, hemodialysis; HPLC, high-pressure liquidchromatography; I, inosine; LC/MS, liquid chromatography/mass specto-metry; m1A, 1-methyladenosine; m1G, 1-methylguanosine; m1I, 1-methyl-inosine; m2G, N2-methylguanosine; m2

2G, N2,N2-dimethylguanosine; m3U,3-methyluridine; m6A, N6-methyladenosine; m7G, 7-methylguanosine;

Table 4. Urine levels of ribonucleosides in healthy subjects and uremicpatients

N

mmol/day

Normal10

CRF11

Major ribonucleosides and their metabolitesA 2.4 6 0.5 2.1 6 0.5I 5.4 6 0.6 2.0 6 0.6b

X 4.6 6 0.4 9.4 6 4.0U 3.1 6 0.3 7.3 6 2.3

Modified ribonucleosidesC 200 6 10 180 6 30m1A 18 6 1 4.7 6 1.3b

m6A 0.85 6 0.09 1.2 6 0.3t6A 5.5 6 0.4 4.6 6 1.0m1I 15 6 1 17 6 4m1G 9.5 6 0.8 2.4 6 0.7b

m22G 12 6 1 6.9 6 1.4b

ac4C 9.2 6 1.0 5.0 6 1.2a

Abbreviations are: A, adenosine; ac4C, N4-acetylcytidine; I, inosine;m1A, 1-methyladenosine; m1G, 1-methylguanosine; m1I, 1-methylinosine;m2

2G, N2,N2-dimethylguanosine; m6A, N6-methyladenosine; t6A, N6-threonylcarbamoyladenosine; U, uridine; X, xanthosine, C, pseudouri-dine.

a P , 0.05 vs. normal by unpaired t-testb P , 0.01 vs. normal by unpaired t-test

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m7Gua, 7-methylguanine; ms2t6A, N6-threonylcarbamoyl-2-methylthio-adenosine; mcm5 s2U, 5-methoxycarbonylmethyl-2-thiouridine; mt6A, N6-methyl-N6-threonylcarbamoyladenosine; PCNR, 4-pyridone-3-carbox-amide-N1-ribofuranoside; t6A, N6-threonylcarbamoyladenosine; U,uridine; X, xanthosine; C, pseudouridine.

REFERENCES1. GEHRKE CW, KUO KCT: Chromatography and modification of

nucleosides. Part C: Modified nucleosides in cancer and normalmetabolism. J Chromatogr Library 45C, Amsterdam, Elsevier, 1990

2. MITCHELL EP, EVANS L, SCHULZ P, MADSEN R, YARBRO JW, GEHRKECW, KUO K: Modified nucleosides in human serum. J Chromatogr581:31–40, 1992

3. ASATOOR AM: Retention of pseudouridine and 4-amino-5-imidazolecarboxamide in uraemia. Clin Chim Acta 20:407–411, 1968

4. SCHOOTS AC, GERLAG PGG, MULDER AW, PEETERS JAG, CRAMERSCAMG: Liquid-chromatographic profiling of solutes in serum ofuremic patients undergoing hemodialysis and chronic ambulatoryperitoneal dialysis (CAPD); high concentrations of pseudouridine inCAPD patients. Clin Chem 34:91–97, 1988

5. DZURIK R, LAJDOVA I, SPUSTOVA V, OPATRNY K JR: Pseudouridineexcretion in healthy subjects and its accumulation in renal failure.Nephron 61:64–67, 1992

6. DANIEWSKA-MICHALSKA D, MOTYL T, GELLERT R, KUKULSKA W,PODGURNIAK M, OPECHOWSKA-PACOCHA E, OSTROWSKI K: Efficiencyof hemodialysis of pyrimidine compounds in patients with chronicrenal failure. Nephron 64:193–197, 1993

7. CHHEDA GB, HONG CI: Synthesis of naturally occurring 6-ureidopu-rines and their nucleosides. J Med Chem 14:748–753, 1971

8. TAKEDA N, NAKAMURA M, YOSHIZUMI H, TATEMATSU A: Detectionof ribose-methylated nucleotides in Pyrodictium occultum tRNA byliquid chromatography-frit-fast atom bombardment mass spectrome-try. J Chromatogr 660:223–233, 1994

9. TAKEDA N, NAKAMURA M, YOSHIZUMI H, TATEMATSU A: Structural

characterization of modified nucleosides in tRNA hydrolysates byfrit-fast atom bombardment liquid chromatography/mass spectrome-try. Biol Mass Spectrom 23:465–474, 1994

10. STRUIJK DG, SCHOOTS AC, KOOLE LH, REIJDEN HJ, KOOMEN GCM,KREDIET RT, ARISZ L: Transport kinetics of pseudouridine duringhemodialysis and continuous ambulatory peritoneal dialysis. J LabClin Med 118:74–80, 1991

11. DZURIK R, SPUSTOVA V, LAJDOVA I: Inhibition of glucose utilizationin isolated rat soleus muscle by pseudouridine: Implications for renalfailure. Nephron 65:108–110, 1993

12. DZURIK R, SPUSTOVA V: Accumulated end products participate inglucose intolerance and insulin resistance in uremia. Nephron 65:481,1993

13. DZURIK R, SPUSTOVA V, JANEKOVA K: The prevalence of insulinresistance in kidney disease patients before the development of renalfailure. Nephron 69:281–285, 1995

14. GERRITS GP, MONNENS LA, DE ABREU RA, SCHRODER CH, TRIJBELSJM, GABREELS FJ: Disturbances of cerebral purine and pyrimidinemetabolism in young children with chronic renal failure. Nephron58:310–314, 1991

15. HONDA K, KOMODA Y, NISHIDA S, NAGASAKI H, HIGASHI A, UCHI-ZONO K, INOUE S: Uridine as an active component of sleep-promotingsubstance: Its effects on nocturnal sleep in rats. Neurosci Res 1:243–252, 1984

16. HONDA K, OKANO Y, KOMODA Y INOUE S: Sleep-promoting effects ofintraperitoneally administered uridine in unrestrained rats. NeurosciLett 62:137–141, 1985

17. INOUE S, HONDA K, KOMODA Y, UCHIZONO K, UENO R, HAYAISHI O:Differential sleep-promoting effects of five sleep substances noctur-nally infused in unrestrained rats. Proc Natl Acad Sci USA 81:6240–6244, 1984

18. CRADOCK JC, VISHNUVAJJALA BR, CHIN TF, HOCHSTEIN HD, ACK-ERMAN SK: Uridine-induced hyperthermia in the rabbit. J PharmPharmacol 38:226–229, 1986

Niwa et al: Ribonucleosides in uremia1806