15
Part 1 In The India significan enormou degradat mangrov importan FAU Har to measu River La knowledg managem humans for curre effects of asset tha Harbor B disciplina assets. Three ke L A C To be on IRLO ne innovativ by our Branch s from any network not only areas in can do individua Observat point, bu need to improve The LOB from the (MBARI) National LOBO fo FAU H M. D ntroduction an River La nce stretchin us (more th tion of wa ves), decline t issues in th rbor Branch ure importan goon Obser ge on comp ment. In sho impact its na nt and futur f human act at also serve Branch rese ary, ecosyste ey ingredient ong-term, m A network of Collaboration n the cuttin eeds to inte ve technolog LOBOs wil scientists (a y organizatio of observing in the IRL, b general. Th alone; indee als and o tory a realit ut a beginnin do to bette the manage BO was de Monterey B with comp Science F or use in th Harbor Bra Dennis Han agoon (IRL) ng along 40 an $3.7 bil ter quality, e of fisheries he IRL, as th is using Lan nt environme rvatory (IRL ponents of ort, we wish atural functio re generation tivities on its es as an ess earch in the em-based a ts of IRLO ar multi-disciplin advanced o n among orga g edge of s egrate scien gy developm l be directl nd we hope on) as part o g stations th but also in e his network i ed, collabor organizations ty. Our LOB ng and only er understan ement of the eveloped by Bay Aquarium etitive fundi Foundation. he IRL as t anch Indian nisak, FAU is a unique 0% of Florid llion per ye contamina s, and emer hey are throu nd/Ocean B ental or wate O). The goa the IRL cri h to better u ons, and how ns. The mor s ecosystem sential engin e IRL, we pproach to s re: nary, ecosyst bserving sta anizations scientific inn ntific resear ment. Data c ly used by e by other s of what we s hat is in its stuaries and s not somet ration amon s will ma BOs are not y a part of w nd the scien Lagoon. y leading s m Research ng provided We selec this technolo 1 L n River Lag U Harbor B e, highly div da’s east co ear). Urbani ant loading ging diseas ughout the w iogeochemic er quality pa al of IRLO i tical to its understand h w we can m re we know , the better e for Florida are well-po study and co tem-based a ations novation, rch with collected Harbor scientists see as a infancy, d coastal thing we ng many ake the t an end what we nce and scientists Institute d by the cted the ogy has LOBO frame data log (http://fau goon LOBO Branch, Oct verse, shallo oast. IRL’s e zation, exce , loss of es in marine world’s estua cal Observa rameters in is to acquire ecological f how this un make the Lag about the d we can prot a’s economy ositioned to onserve one approach with represe gger, and ba u-hboi.lobovi Os: A Prim tober 2013 ow-water es economic va essive fresh habitat (e. e mammals aries and co atory (LOBO the IRL as e and disse function and ique system goon and its dynamics of tect this irrep y. With more create a e of Florida’s entative sens attery pack. z.com/about mer 3 stuary of nat alue to Flori hwater relea .g., seagra are increas oastal waters ) instrument part of the In eminate data d its sustain m works, how resources b f the IRL an placeable na than 40 yea long-term, m s most signif sors, t/) tional ida is ases, sses, singly s. tation ndian a and nable w we better d the atural ars of multi- ficant

FAU Harbor Branch Indian River Lagoon LOBO · The Link Port LOBO site also has a weather station which allows direct linkage of local weather with water quality data. Harbor Branch’s

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Page 1: FAU Harbor Branch Indian River Lagoon LOBO · The Link Port LOBO site also has a weather station which allows direct linkage of local weather with water quality data. Harbor Branch’s

Part 1 In

The Indiasignificanenormoudegradatmangrovimportan

FAU Harto measuRiver Laknowledgmanagemhumans for curreeffects ofasset thaHarbor Bdisciplinaassets.

Three ke

L

A

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rbor Branch ure importangoon Obserge on compment. In shoimpact its nant and futurf human act

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ong-term, m

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agoon (IRL) ng along 40an $3.7 bilter quality,

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ow-water eseconomic vaessive freshhabitat (e.

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Page 2: FAU Harbor Branch Indian River Lagoon LOBO · The Link Port LOBO site also has a weather station which allows direct linkage of local weather with water quality data. Harbor Branch’s

2

The Link Port LOBO site also has a weather station which allows direct linkage of local

weather with water quality data.

Harbor Branch’s first LOBO site is in the Indian River Lagoon, just outside the Harbor

Branch Channel.

been scientifically proven over time by oceanographers and estuarine researchers to produce the highest caliber needed for oceanographic and coastal data. LOBOs have a national and international presence (in California, Oregon, Delaware, Maine, the west coast of Florida, and Canada) the LOBO units are ideal multi-sensor packages that increase the efficiency of environmental monitoring. LOBOs have the flexibility to substitute or add different sensor instruments as new scientific needs are identified.

Currently we are measuring temperature, salinity, dissolved oxygen, turbidity, CDOM (colored dissolved organic matter, or more simply, water color), chlorophyll (indicative of algae in the water column), nutrients (phosphate, nitrate), and current speed and direction. LOBOs are designed to reduce fouling that rapidly occurs in anything deployed into an estuary, minimize operational and maintenance expenses, and provide real-time and retrospective high-accuracy and high-resolution data via a dedicated interactive website. LOBOs can collect data 24/7 and allow real-time observation of significant events, such as water discharge, algal blooms, and storm events so that researchers can determine how these events are related to ecosystem change. Data from our LOBO units in the IRL will integrate into the nationwide Integrated Ocean Observing System (IOOS) through Southeast Coastal Ocean Observing Regional Association (SECOORA), allowing comparative studies both within Florida and in the nation.

Harbor Branch’s first LOBO went live to the public on June 11, 2013. We chose to put this first unit in the IRL just outside Harbor Branch’s Channel, near what has historically been called the “Link Port Station” and near some other long-term research sites we are working at. The Link Port site is important in scientific studies of the IRL as its proximity next to Harbor Branch has facilitated long-term research at that site since the 1970’s by researchers from many different institutions.

The installation and maintenance of the LOBO network is being done by a group of Harbor Branch scientists, engineers, and support staff. The data being collected will be directly used by Harbor Branch researchers and be freely available, at any time, from any computer or mobile device to all who wish to view or use the data – scientists from other institutions, managers of the IRL, educators, students, and the interested public – simply by going to the following website: http://fau-hboi.loboviz.com. With four months of hourly data now available, we invite you to click to that website and begin your explorations of water quality of the Indian River Lagoon!

Page 3: FAU Harbor Branch Indian River Lagoon LOBO · The Link Port LOBO site also has a weather station which allows direct linkage of local weather with water quality data. Harbor Branch’s

3

Part 2 HBOI LOBOviz Home Page: Current Data and Portal for More Information

When you go to http://fau-hboi.loboviz.com (see example below), along the left hand side of the home page you will see all of the most recent readings from our weather station and our sensors below the water:

We report some parameters in two sets of units; one that scientists are more likely to use, while the other is more likely to be used by the public. So, for example, the temperature above on October 9, 2013, at 15:00 Eastern Standard Time was 26.4°C (Celsius) or 79.6°F (Fahrenheit). We use a 24-hour clock, which is the most commonly used time notation in the world: the day runs from midnight to midnight, divided into 24 hours, and indicated by the hours passed since midnight, from 0 to 23. In the U.S., this convention is commonly called “military time”, while most of us use the 12-hour clock (with a.m. and p.m.). Scientists, like the military, prefer to use the 24-hour clock in our work to prevent any ambiguity in time. We also often use Standard Time year-round for consistency and to facilitate use of our data by colleagues in other time zones.

Page 4: FAU Harbor Branch Indian River Lagoon LOBO · The Link Port LOBO site also has a weather station which allows direct linkage of local weather with water quality data. Harbor Branch’s

4

Note that you can click on any of the envirnomental parameters and go to a page outside the website which provides information on what that parameter means. For example, click on “Salinity”, and you will go to the Wikipedia entry for salinity, and you can read a brief tutorial on salinity: what it is, how we use salinity to classify water bodies, environmental considerations, references, and further reading. More than you might want to know at one time, but this is an opportunity to fine tune your understanding of what these different parameters are and why they are important.

Other important information on the home page is location information, including a short site description, and an aerial photo and map of the site. If you prefer to see a satellite image of the site, click “Satellite”. If you can’t decide, or if you want the best of both worlds, click “Hybrid”! And don’t forget you can zoom in or out or move in any direction to get a better idea of where this site is relative to your local knowledge. Lastly, another cool feature of our LOBO site is its interface with Google Earth. This is free software and you can easily install by following the details under the “GE” tab. Then click http://fau.loboviz.com/0035.kml and you will be whisked away to the image below. Click our icon and you can get our most current data there rather than going back to the HBOI LOBOviz site.

But that is just the start of what you can do with our data. Our home page provides you with current data, but most of us are also interested in patterns and relationships among the different types of data over time. When you are ready, click the next tab at the top (LOBOVIZ) of the home page. Now the fun really begins!

Page 5: FAU Harbor Branch Indian River Lagoon LOBO · The Link Port LOBO site also has a weather station which allows direct linkage of local weather with water quality data. Harbor Branch’s

Part 3 Ex

A signifipackage view reasimultaneto the mo

On our Hhand sidenvironmyou wouselect an

Our first largest ois one owaters adynamic water exfirst questhe tidal selectingVariable(and “davisualize period yoselected 22 to Aumoon tolinked toclicked “P

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Page 6: FAU Harbor Branch Indian River Lagoon LOBO · The Link Port LOBO site also has a weather station which allows direct linkage of local weather with water quality data. Harbor Branch’s

Notice hlevel chaamplitudethe two ttaking jusending o

At this silow tide, which haexpect tothe relatiby checkexpected

ow quickly Langes at thise (differencetides on a pst the last wn End Date”

ite, at high twe would e

as three mao see changonship of saking “salinityd pattern:

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week of data ” and set “En

tide, we wouexpect to seeajor freshwates in salinity

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igh and low y not being (so go back

nd” as “2013

uld expect te more flow ter dischargy (the saltinede height, oas “depth of

6

ch request!g twice-a-day

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o see more from furthere canals thess of the wne can add f instrument

This plot sy high- and full moon anal. This lastBranch LOB

water flowir up the lagoat drain Ind

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ly how the woints, the hign (August 6)tter visualizeand select “

rt Pierce Inlecally Vero BeCounty. Thus

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et. At each, s, we o see ation, e the

Page 7: FAU Harbor Branch Indian River Lagoon LOBO · The Link Port LOBO site also has a weather station which allows direct linkage of local weather with water quality data. Harbor Branch’s

Part 4 Ex

Salinity isas parts recently units of swithout Freshwa

In the IRhighly determ aveliving in range fotolerate impacts like:

This visuhigh of 3salinity aAugust, sdecreasivaries qu

How migLOBO stduring thVariables

xploring LO

s the conceper thousa

scientists hasalinity, or nunits. Oceater contains

RL, salinity vependent onerage salinity

the IRL. Ear optimal cosmall variaton organism

ualization sh33. The salinat Link Portsalinities recng sharply i

uite a lot, at j

ght we get atation has a his period of s” on the LO

OBOviz: Sal

ntration of sand or gramave replacednot even usean water, ofew salts an

varies widely rainfall, eva

y at Link Porach species onditions. Stions. Annuams. Using LO

ows that sanity record s. Salinity incover, but din the first pjust one loca

a handle on weather statime. Rain d

OBOviz page

inity

salt dissolvedms of salt pe

d parts per ed units, as or full-strennd thus has

y dependingaporation, anrt is about 30has a diffeome specieal and seasOBOviz, her

linity variedstarted at 30creased thr

declined for part of Octoation in the L

what causeation, an immdata can be e and then cl

7

d in water. Ser 1000 grathousand wthe definitiogth seawatlow salinity (

g on locationnd run-off fro0. Salinity is rent range o

es tolerate wsonal patternre is what o

quite a lot a0, which is aough June, most of Sepber. Salinity

Lagoon!

es these chmediate appfound by cliicking “rain”

Salinity tradiams of wate

with PSU (Pron of the sater, typically(less that 0.5

n, time of yeom the landa very impo

of salinities wide fluctuans are very

our first four

at this site, rapproximatebut then ra

ptember, bey clearly is a

anges in saproach is to icking “[wea”:

itionally haser sample (ractical Salinalinity is actuy has a sa5).

ear, and yead in the wateortant factor

for survivaltions in sali important months of s

ranging fromely the histoapidly decre

efore rapidly an environm

alinity at thislook at the ther]” at the

been expre(ppt, o/oo).nity Units) aually a ratio,alinity of 3

ar to year, bershed. The

for all organl and a narrinity; othersin understansalinity data

m a low of 23orical averageased in Ju

increasing,mental factor

s site? Sincepattern of ra bottom of th

essed More

as the thus

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3 to a ge for ly. In then r that

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Page 8: FAU Harbor Branch Indian River Lagoon LOBO · The Link Port LOBO site also has a weather station which allows direct linkage of local weather with water quality data. Harbor Branch’s

This visuextensionthe lower

Many enrunoff froaquatic ainverse r

ualization clen, runoff fror the salinity

nvironmentalom land). Wand terrestriaelationship:

early shows m the IRL’s. Salinity inc

l factors in Water color (al vegetation

that the dro watershed.

creases whe

the IRL are(CDOM) is n. A plot of w

8

ops in salinit. The more

en conditions

e directly tieprimarily duwater color a

ty are relaterain and dis

s are drier.

ed to salinityue to tanninand salinity v

ed to rainfall scharge from

y (and hencs from the vs. time sho

patterns anm the waters

ce to rainfalnatural dec

ows a very s

nd, by shed,

l and cay of strong

Page 9: FAU Harbor Branch Indian River Lagoon LOBO · The Link Port LOBO site also has a weather station which allows direct linkage of local weather with water quality data. Harbor Branch’s

Part 5 Li

Seagrassbeds leaproductivsince 20study 20attenuatimostly opigment phosphocolor vs.

ight Attenua

s is critical toad to a heave. Significa11 with mas

0 years agoon to IRL sriginate fromin the wa

rus. How arsalinity. Her

ators: Turb

o the producalthy IRL! Snt reductionssive losses, I demonsteagrass we

m poor land ater). Chlorore these attere are LOBO

idity, Water

ctivity and bSeagrasses

s in light nes of seagrastrated that tre (in orderuse), water

ophyll is linenuators relaOviz visualiza

9

r Color, and

iodiversity ohave a hig

egatively impss in the northe water quof importan

r color (prevnked to nuated to freshations for sa

d Chlorophy

of the Lagoogh light requpact seagrasrthern half ouality factornce): turbiditviously descrutrient levelh water inpualinity with tu

yll

on. In short, uirement to sses, such aof the IRL. Inrs most respty (suspendribed), and cls, especial

uts? We havurbidity and c

healthy seagbe healthy

as we have n a Lagoon-ponsible fored particleschlorophyll (lly nitrogen

ve already plchlorophyll:

grass y and seen -wide r light , that (algal

and lotted

Page 10: FAU Harbor Branch Indian River Lagoon LOBO · The Link Port LOBO site also has a weather station which allows direct linkage of local weather with water quality data. Harbor Branch’s

So, for thsaw for wattenuati

Another directly r(“date”) othe same

his period of water color)ng light avai

use of LOBelated to theout of conside for chlorop

time at this , but not forilability by w

BOviz is to ve other? Forderation andphyll:

site, there isr turbidity. T

water color an

visualize ther example, fo plot CDOM

10

s a nice inveThis suggestnd algae in t

e relationshior these dat

M (“Y variable

erse relationts that currethe water co

p between tta on light ae”) vs. salinit

nship with chently fresh wolumn, but no

two paramettenuators, wty (“X variab

hlorophyll (likwater impactot by turbidit

eters, how iswe can takeble”), and the

ke we ts are ty.

s one e time en do

Page 11: FAU Harbor Branch Indian River Lagoon LOBO · The Link Port LOBO site also has a weather station which allows direct linkage of local weather with water quality data. Harbor Branch’s

Part 6 N

All organplants, slevels ofnorthern excessivfertilizer other bypdischargemonths:

utrients: Ni

nisms need such as seaf nutrients, tIRL in 2011e nutrients, (both by hoproducts of es. Here ar

trate and P

nitrogen angrasses andthey can ca1 and 2012.

a result of me owners our society.

re LOBOviz

hosphate

nd phosphod algae. At ause excessEstuaries thhuman activand agricultIn the IRL, visualizatio

11

orus. In estulow levels,

sive algal bhroughout thvities in the ture), humana major souns of nitrate

uaries thesenutrients in

looms, suchhe world are

watershedsn waste (sewurce of nutrie and phosp

e nutrients ancrease prodh as we exe experiencins. Sources iwage and sent enrichmphate with s

are taken uductivity. At

xperienced inng problemsnclude too m

septic tanks)ment is freshw

salinity over

up by t high n the s with much ), and water r four

Page 12: FAU Harbor Branch Indian River Lagoon LOBO · The Link Port LOBO site also has a weather station which allows direct linkage of local weather with water quality data. Harbor Branch’s

Here arevs. salini

Both nucommunusing LOimprovemrecognize

e LOBOviz vty:

trients showities in redu

OBO technoloments in esed as the mo

visualizations

w elevated ucing nutrienogy will provstuarine heaost significa

s that show

levels at nt loads intovide a strongalth followinnt human im

12

the relations

lower salinio the IRL. Tg water qualng the redumpacts on th

ship of nitrat

ities. ThereThis real-timity baseline

uction of free IRL.

te vs. salinit

e is much me water quto quantify eeshwater in

ty and phosp

interest in uality time sexpected ponputs, which

phate

local series ositive h are

Page 13: FAU Harbor Branch Indian River Lagoon LOBO · The Link Port LOBO site also has a weather station which allows direct linkage of local weather with water quality data. Harbor Branch’s

Part 7 D

All animaamount ohigh leveorganismphotosynThe lowehours caplotting t

Unlike wsee:

issolved Ox

als need oxyof dissolved els of photosms on the nthesis. As der the concean result in fhe dissolved

hat we saw

xygen

ygen to survoxygen that

synthesis, wplanet. Low

dissolved oxentration, theish kills. Eacd oxygen dat

for salinity, t

vive. At ant we expect

which is the pwer levels ygen levels e greater is ch day thereta for the we

this pattern i

13

y given salito see (=10

process by woccur whedrop below the stress.

e is a naturaeek ending A

is not due to

inity and tem00% saturatiwhich most

en respiratio4.0 mg/l, aqOxygen lev

al rhythm thaAugust 20:

o tidal cycle;

mperature, ton). Higher oxygen is m

on in the squatic life bevels below 1at occurs as

adding dep

there is a celevels are d

made availabsystem excecomes stres-2 mg/l for a

s can be see

th to this plo

ertain due to ble to ceeds ssed. a few en by

ot, we

Page 14: FAU Harbor Branch Indian River Lagoon LOBO · The Link Port LOBO site also has a weather station which allows direct linkage of local weather with water quality data. Harbor Branch’s

Instead d“solar rad

A visualizwith salin This visusalinity d

dissolved oxdiation” unde

zation of ounity, with low

ualization suuring July; c

xygen follower “[weather]

r 4 months ow levels prim

uggests thatcommunity re

ws the daily ]” with the d

of data showarily found i

t productivityespiration w

14

light availabissolved oxy

ws a strong n the low-sa

y of the IRLwas greater th

bility, which ygen data:

relationship alinity water w

L was lowehan photosy

we can visu

dissolved owe experien

er during peynthesis.

ualize by plo

oxygen saturnced in July:

riods of red

otting

ration

duced

Page 15: FAU Harbor Branch Indian River Lagoon LOBO · The Link Port LOBO site also has a weather station which allows direct linkage of local weather with water quality data. Harbor Branch’s

15

Part 8 Concluding Remarks

While four months is a very short time series in a dynamic estuary like the Indian River Lagoon, the above “primer” shows how LOBO technology is making important environmental data available to all users, real time, any time. We hope that you will continue to use our time series to get a better understanding of how the Indian River Lagoon functions and how it is impacted by changes in water quality.

While LOBOviz provides a terrific visualization tool, anyone can download any or all of the available data from any of the graphs, by clicking “Data as text” and saving the file on your computer. Another important feature is our Quality Assurance/Quality Control (QA/QC) program, which you can review by clicking on the “QA/QC” tab on our LOBOviz home page. QA/QC refers to the process or set of processes used to measure and assure the quality of a product (QA) and the process of meeting products and services to consumer expectations (QC). The data made available on this website should be considered provisional for all use. Each year metadata files will be made available to all interested parties.

Working with various partners we will continue to expand our LOBO network of sensors. These capabilities will enable HBOI and other researchers and educators to understand seasonal and long-term variability in water chemistry on the ecosystem functions of the Lagoon. These long-term environmental datasets are needed to observe and predict how these functions are affected by climate change, storms, droughts, and other complex chemical, geological, and biological interactions. In addition, having greatly enhanced, real-time detection of hydrologic and nutrient variability will expand the ability to determine triggers and consequences of acute events (e.g., tropical storms and hurricanes) and help dictate sampling events and experimental designs related to other elements of ecosystem function that might be impacted, such as zooplankton grazing, fish movements, and animal health.

We hope that all interested parties will find our developing network of environmental sensors in the IRL to be useful. To receive metadata information and request any other information, please contact FAU Harbor Branch at: [email protected].

This initial LOBO research in the Indian River Lagoon has been supported by FAU Harbor Branch and the Save Our Seas Specialty License Plate Funds.