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    INTRODUCTION TO STRUCTURE DETERMINATION

    There are so many organic compounds in existence that it can be difficult to establishexactly what compounds, or what combinations of compounds, are present in a given

    sample. Chemical tests can be used to distinguish between different functional groups,

    and melting point and boiling point data can provide some further information as to theidentity and purity of a compound, but they can generally only confirm suspected

    structures and can not usually be used to identify new compounds. Chemical techniques

    also require fairly large quantities of sample and are not always effective at distinguishingbetween similar compounds.

    Chemists have developed a number of other, more precise, analytical techniques to

    determine the exact structure of organic compounds. Knowledge of three of thesetechniques is required for AQA Alevel Chemistry. These are mass spectrometry, infra-red spectroscopyand nuclear magnetic resonance nmr! spectroscopy.

    As infrared spectroscopy is covered at A!level, this topic is concerned with a moredetailed consideration of mass spectrometry and nmr spectroscopy.

    At Alevel, these analytical techniques must be used to determine the structure of organic

    molecules containing carbon, hydrogen and oxygen only and generally containing no

    more than six carbon atoms. The molecule being analysed will be an al"ane, al"ene,alcohol, ether, carbonyl, carboxylic acid or ester.

    #sually, information is given which enables the empirical formula to be deduced before

    the analysis begins. This is usually given in the form of composition by mass$

    %g A compound contains &'.'( carbon, )*.*( oxygen and +.( hydrogen.

    -ole ratio$ C &'/0 1 *.*

    2 +./ 1 +.

    3 )*.*/+ 1 *.*

    !implest whole number ratio$C *.**.* 1 /

    2 +.*.* 1 0

    3 *.**.* 1 /

    !o empirical formula 1 C203

    The molecular formula of the molecule, and its structure, can then be deduced from one

    or more of the analytical techniques.

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    MASS S"ECTROMETR#

    a4 5ntroduction

    The technique of mass spectrometry was used at A!level to determine the relative

    abundances of different isotopes in a sample of an element, to deduce relative atomicmasses and to deduce molecular formulae.

    -ass spectrometry can also be used to determine the structure of organic molecules. 5nsome respects molecules behave in a similar way to atoms in a mass spectrometer, but

    there are important differences$

    6hen a molecule is ionised, one electron is removed. As molecules generally containpaired electrons only, the result is the formation of a species with an unpaired electron, or

    a free radical.

    %g ethane$

    C CH H

    HH

    HH

    xoxxxx

    o

    ooo

    x x

    xo C CH H

    HH

    HH

    xoxxx

    x

    o

    ooo

    x x

    xo +

    or C02+7C02+89:9 e

    The resulting species is thus a positi$ely c%arged ionand also a free radical. 5t is "nown

    as the molecular ion;or parent ion4.

    Two possible things can happen to a molecular ion when it is formed$

    it can pass intact through the mass spectrometer and onto the detector, being

    detected as having an m< ratio of which < 1 / and m 1 relative mass of

    molecular ion.

    it can brea" up into two smaller, more stable species, one of which is a

    positively charged ion and one is a free radical. This is "nown as

    fragmentation. This will result in the detection of species with m< ratioswhich are less than that of the molecular ion.

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    The result is that a number of different pea"s are seen in the mass spectrum of an organic

    molecule$

    the pea" with the largest m< ratio corresponds to the molecular ion, and this

    m< ratio corresponds to the relative molecular mass of the molecule.

    the pea"s with smaller m< ratios result from fragmentation of the molecular

    ion. These pea"s can be used to deduce more information regarding thestructure of the molecule, because different molecules fragment in different

    ways and some fragments are more stable than others.

    %g mass spectrum of ethanol$

    The mass spectrum of ethanol contains several pea"s$

    the largest m< ratio in the mass spectrum is &+. This is therefore the

    molecular ion pea" which means that the molecule has a relative molecularmass of &+.

    the other pea"s with smaller m< ratios result from fragmentation of the

    ethanol molecule. The most abundant fragment ions appear to have relative

    masses of &) and */, and there are less abundant fragment ions with masses of0 and 0=

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    &! fragmentation

    >uring fragmentation, the free radical molecular ion is bro"en up. As the molecular ion

    contains an odd number of electrons, one of the species into which it fragments will

    contain an even number of electrons ;this will be a positive ion4 and the other will containan odd number of electrons ;this will be a free radical4.

    %g consider the case of ethane$

    +CCH H

    HH

    HH

    xoxxx

    o

    ooo

    x x

    xo CH

    H

    H

    ox

    xx

    oo

    xC H

    H

    H

    xo

    ox

    xo

    This is the free radical molecular

    ion

    This species "eeps

    the unpaired electronand is an unchargedfree radical

    ;not detected in massspectrometer4

    This species loses the

    electron and is a positivelycharged ion

    ;detected in massspectrometer4

    This process can be represented by the equation$

    7C02+89:7C2*8

    :9 7C2*89

    3nly the charged species is detected as the neutral free radical is neither accelerated nordeflected.

    The process of fragmentation can thus be represented by the following general equation$

    R'( ?99 @:

    9:is the molecular ion and is detected ;assuming not all of them fragment4?9is the fragment ion and is detected

    @:is the fragment radical and is not detected

    c! sta&le ions

    Bot all possible fragments are detected some of the fragments form stable ions and

    these are more li"ely to be formed.

    The most stable cations are carbocations ;eg C2*9, C2*C20

    9and C2*C2C2*94 and

    acylium ions ;eg 2C39, C2*C39, C2*C20C3

    94. These are thus the fragments most li"elyto be detected, and will give the most intense pea"s in a mass spectrum.

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    The main pea"s in the mass spectrum of an organic compound will thus be the molecular

    ion pea" and the pea"s corresponding to the most stable ions which can be formed from

    fragmentation of the molecular ion.

    %g butanone$ C2*C20C3C2*

    %xpected in the mass spectrum of butanone would be$

    m< ratio 5on responsible %quation to show formation of ion

    0 7C2*C20C3C2*89:

    /) 7C2*89 7C2*C20C3C2*8

    9:7C2*899 7C20C3C2*8

    :

    0= 7C2*C2089 7C2*C20C3C2*8

    9:7C2*C20899 7C3C2*8

    :

    ) 7C2*C20C389 7C2*C20C3C2*8

    9:7C2*C20C3899 7C2*8

    :

    &* 7C3C2*89 7C2*C20C3C2*8

    9:7C3C2*899 7C2*C208

    :

    The real mass spectrum of butanone is shown below$

    The most abundant pea" is &*, followed by 0 and 0=. The pea"s at /) and ) can also be

    accounted for. ;5t is rarely possible to account for all the pea"s in a mass spectrum4

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    d! using mass spectra to determine structure

    The molecular ion pea" enables the relative molecular mass of the compound to be

    deduced.

    The other pea"s give the masses, and hence the possible identities, of the fragments.

    These gives important clues to the structure of the unfragmented molecule.

    %g A pea" at 0= suggests the presence of C2*C209

    A pea" at &* suggests the presence of C2*C20C209, C2*C2C2*

    9or C2*C39

    A pea" at ) suggests the presence of C2*C20C39or C2*C3C20

    9

    The presence ;or absence4 of these fragments gives important information as to whichstructural features are present ;or not present4 in the molecule. This is particularly useful

    for distinguishing between isomers$

    %g C&2/' butane gives pea"s at /), 0=, &* and )Dmethylpropane gives pea"s at /), &* and )D only ;no pea" at 0=4

    %g C*2+3 propanal gives pea"s at /), 0=, &* and )D

    propanone gives pea"s at /), &* and )D only ;no pea" at 0=4

    %g C02+3 ethanol gives pea"s at /), 0= and &+

    -ethoxymethane gives pea"s at /) and &+ ;no pea" at 0=4

    Thus the presence ;or absence4 of specific fragments enables the structure to bedetermined.

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    N)M)R S"ECTROSCO"#

    a! Introduction

    !ome nuclei have magnetic properties. 5f these nuclei are subEected to a strong magnetic

    field, they can either align themselves in the same direction as the magnetic field ;a lowenergy state4 or in the opposite direction ;a highenergy state4. 6hen these nuclei are then

    subEected to radio waves with a range of frequencies, each nucleus can absorb the

    frequency which corresponds to the difference in energy between its lowenergy state andits highenergy state and switch from one to the other. The absorption can be detected and

    converted into a spectrum. The frequency of the radiation absorbed by the nuclei varies

    depending on the type of nucleus and the arrangement of electrons around that nucleus,

    and can thus be used to provide important structural information about the molecule. Thistechnique for structure determination is "nown as nuclear magnetic resonance ;nmr4

    spectroscopy.

    There are a number of different types of nmr spectroscopy, depending on the type ofnucleus being investigated. Two techniques are required at Alevel$

    proton nmr spectroscopyinvestigates the absorption of radiation by nuclei of

    hydrogen atoms ;/24 and is thus a technique for obtaining information about

    the number and arrangement of hydrogen atoms in a molecule car&on-*+ nmr spectroscopyinvestigates the absorption of radiation by

    nuclei of carbon/* atoms ;/*C4 and is thus a technique for obtaining

    information about the number and arrangement of carbon atoms in a molecule

    &! proton nmr spectroscopy

    A number of important pieces of information can be deduced from analysis of a protonnmr spectrum$

    5dentical hydrogen atoms all absorb radiation at the same frequency and socontribute to the same pea". The number of different pea"s, therefore, tells

    you the num&er of different en$ironments of %ydrogen atomsin the

    molecule.

    The area under each pea" is related to the intensity of the absorption and gives

    information about the num&er of %ydrogen atoms of t%at typein the

    molecule. The relative intensity of the pea"s is "nown as the integration

    factorand is generally given as a simplest whole number ratio ;as it is not

    always easy to see from the spectrum4

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    The frequency of the radiation absorbed depends on the environment of the

    hydrogen atom and gives information about the position of t%ose %ydrogen

    atoms in t%e molecule relati$e to ot%er car&on atoms and functional

    groups. The actual frequency of the absorption is difficult to measureF instead

    the frequency is measured relative to a standard. 6hat is measured is thedifference between the frequency absorbed by the sample atoms and the

    frequency absorbed by the standard, expressed as a fraction of the frequency

    absorbed by the standard. This fraction is "nown as the c%emical s%iftand isgiven the symbol G.

    G 1 f;sample4 f;standard4

    f;standard4

    The value of G is generally very smallF typically //' x /'+. 5t is thereforeexpressed in parts per million ie 0.' x /'+is equivalent to 0.' ppm. The

    chemical shift is generally greater if the hydrogen atoms are closer to

    electronegative atoms, but is also relatively high for hydrogen atoms close to

    al"ene and arene groups. 2ydrogen atoms with a large chemical shift are saidto be des%ielded, and hydrogen atoms with a low chemical shift are said to be

    s%ielded. The pea" resulting from the standard always has ;by definition4 achemical shift of

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    A typical proton nmr spectrum loo"s li"e this$

    Irom this spectrum, it is clear that there are four pea"s. The chemical shift can be read

    from the hori

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    c! car&on-*+ nmr spectroscopy

    Carbon/* nmr spectroscopy wor"s in a similar way to proton nmr spectroscopy, but it ismuch simpler$

    5dentical carbon atoms all absorb radiation at the same frequency and socontribute to the same pea". The number of different pea"s, therefore, tells

    you the num&er of different en$ironments of car&on atomsin the molecule.

    The area under the pea"s does not correspond exactly to the intensity of the

    absorptions, so it is not possible to conclude the number of carbon atoms

    present in each environment.

    The frequency of the radiation absorbed depends on the environment of the

    carbon atom and gives information about the position of those carbon atoms in

    the molecule relative to other atoms and functional groups. This is measured

    in the same way as in proton nmr spectra, using c%emical s%ift.

    Jea"s in the carbon/* nmr spectrum are not split, so it is not possible todeduce information about the number of adEacent carbon atoms in each carbon

    environment

    A typical carbon/* nmr spectrum loo"s li"e this$

    http://en.wikipedia.org/wiki/File:Vanillin_13-C_NMR_spectrum.PNG
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    Irom this spectrum, it is clear that there are eight pea"s. This means that there are eight

    different types of carbon atom in the molecule, each with a different chemical shift.

    c! "reparing samples for proton nmr analysis

    efore a spectrum can be analysed, it is necessary to produce a spectrum and preparing asample for proton nmr analysis requires some consideration$

    i4 Choosing a suitable solvent

    5t is necessary to dissolve the sample in a solvent before it can be analysed. The problem

    with most solvents is that they themselves contain hydrogen atoms which absorb

    radiation, interfering with the spectrum produced by the sample. 5t is therefore necessaryto use a solvent which contains no hydrogen atoms. The usual choices are CCl&and

    C>Cl*. > is the symbol for deuteriumF this is an isotope of hydrogen containing one

    neutron in its nucleus. 5t has no magnetic properties and does not interfere with a proton

    nmr spectrum.

    ii4 Choosing a standard

    5n addition to the solvent, a standard ;or reference4 molecule must be added to calibrate

    the spectrum. The chemical shift is then measured relative to this standard as describedabove. The standard normally used is tetramethylsilane ;T.-.!.4 which has the following

    structure$

    Si

    C

    C

    C

    C

    H

    H

    H

    HH

    H

    H

    H

    H

    H

    H

    H

    This substance has a number of advantages as a standard$

    5t produces a single, singlet pea" which is very intense ;there are /0 2 atoms,all identical4 which ma"es the pea" easy to identify.

    The 2 atoms are highly shielded ;as the !i is an electropositive atom,releasing electron density onto the 2 atoms4 so the pea" is generally at a

    significantly lower frequency than that found in most organic molecules,

    meaning that it does not interfere with the other pea"s and can be easilydistinguished from them.

    5t is cheap and nontoxic.

    The large singlet which arises in proton nmr spectra at G 1 ' as a result of the T-!

    standard is usually erased from the spectra before it is produced ;so you never see it4.

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    d! Using proton nmr spectra in structure determination

    Jroton nmr spectra are very useful for wor"ing out the structure of organic molecules,particularly if the molecular formula is "nown. The information from a spectrum can be

    bro"en down into four parts$

    i4 the number of pea"s

    %ach pea" corresponds to one set of identical hydrogen atoms. The number of pea"stherefore gives the number of types of hydrogen atom present.

    5n some molecules, all the hydrogen atoms are identical. These molecules give only one

    pea" in the spectrum.%g ethane, propanone, methoxymethane

    C

    H

    H

    C

    H

    H

    H H H C

    H

    H

    C

    O

    HC

    H

    H

    C C

    H

    H

    H

    H

    H

    H O

    5n some molecules, there are two types of hydrogen atom. These molecules will give two

    pea"s in a proton nmr spectrum.

    %g butane, pentan*one, ethanal, methanol

    C C

    H

    H

    C

    H

    H

    H C

    H

    H

    H

    H

    H

    C

    O

    H

    CH3

    C OH

    H

    H

    H

    -ost molecules, however, give more than two pea"s$

    utanone gives three pea"s$

    HC C

    H

    H

    C

    H

    H

    H C

    H

    H

    O

    these H atomsare identical these H atoms

    are identical

    these H atomsare identical

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    utanal gives four pea"s$ %thanol gives three pea"s$

    H

    H H

    C

    H

    H

    CC

    H O

    HCH

    H H

    HH

    CC OHH

    %ach of the 2 atoms within the same circle are identical and contribute towards the same

    pea".

    -ethylpropanal gives three pea"s$

    H

    H

    H

    C

    H

    H

    CCH

    O

    H

    C

    H

    these six H atomsare all identical

    this H atomis unique

    this H atomis unique

    ii4 integration factor

    The integration factor indicates the number of identical hydrogen atoms corresponding to

    that pea". -olecules which give the same number of pea"s can be distinguished because

    the integration factor of each pea" is different, corresponding to a different distribution of2 atoms in the molecule.

    %g. -ethylpropanal and butanone ;C&2D34 both give three pea"s in their proton nmrspectra$

    H

    H

    H

    C

    H

    H

    CCH

    O

    H

    C

    H

    these six H atomsare all identical

    HC C

    H

    H

    C

    H

    H

    H C

    H

    H

    O

    2owever the integration factors of the three pea"s in methylpropanal will be +$/$/, but inbutanone they will be *$*$0. The two molecules can thus be distinguished by their proton

    nmr spectra because the integration factors of the pea"s are different.

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    iii4 chemical shift

    The chemical shift depends on the environment around the 2 atomF in particular it isrelated to the proximity of electronegative atoms. The nearer a hydrogen atom is to an

    electronegative atom, the more deshielded it will be and the greater the chemical shift.

    Ior example, 2 atoms in al"anes tend to have low chemical shifts ;G1 ' 04, but 2 atomsattached to 3 atoms in carboxylic acids tend to have high chemical shifts ;1 /'/04.

    All 2 atoms not within one carbon atom of a functional group will have a chemical shiftbetween ' and 0 ppm.

    The following table summarises the important chemical shifts for 2 atoms in common

    environments close to a functional group$

    environment Type of molecule Chemical shiftppm

    2CC13 carbonyl 0.' 0.)

    2C3 alcohol or ether *.* &.'32 alcohol '.) ).'

    2C1C al"ene &.+ ).=

    2C13 aldehyde = /'

    32 acid /' /0

    The chemical shift data provides useful information in deducing the environments

    responsible for a particular pea" and identifying functional groups$

    Consider the proton nmr spectra of two un"nown compounds$

    /.

    The pea" at G 1 =. suggests an 2 atom in an aldehyde group.

    The pea" at G 1 0.) suggests 2 atoms on a C adEacent to a carbonyl groupThe pea" at G 1 /./ suggests 2 atoms on a C not adEacent to a functional group

    5ntegration factors ;/ for G 1 =., 0 for G 1 0.), * for G 1 /./4 would suggest propanal$

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    H

    H

    H

    C

    H

    CCH

    O

    H

    9.7 (1 H)

    2.5 (2 H)

    1.1 (3H)

    0.

    The pea" at G 1 *.+ suggests an 2 atom on a C adEacent to a C3 bond

    The pea" at G 1 0.* suggests 2 atoms on a C adEacent to a carbonyl group, but as this is

    inconsistent with the structure it could also suggest an 2 atom bonded to 3 in an alcoholThe pea" at G 1 /.+ suggests 2 atoms on a C not adEacent to a functional group

    The pea" at G 1 '.= suggests 2 atoms on a C not adEacent to a functional group

    5ntegration factors ;0 for G 1 *.+, / for G 1 0.*, 0 for G 1 /.+ and * for G 1 '.=4 would

    suggest propan/ol$

    C C C OH

    HHH

    H

    HHH

    2.3 1H

    3.7 2H

    1.! 2H".9 3H

    Chemical shift data is thus useful for identifying functional groups and for deducing the

    position of other 2 atoms on the molecule.

    iv4 coupling

    As was discussed earlier, the absorption of radiation by hydrogen atoms is affected by the

    presence of hydrogen atoms on adEacent carbon atoms ;provided they are not involved in

    hydrogen bonding4. These hydrogen atoms on adEacent carbon atoms cause a splitting ofthe pea" according to the ;n9/4 rule as described earlier.

    This is very useful for positioning the hydrogen atoms in different environments relative

    to each other.

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    Consider a C2* group. This will account for a pea" with integration factor *.

    The splitting of this pea", however, will depend on the hydrogen atoms on the adEacentcarbon atom$

    C C

    HH

    H

    HH

    2ere n 1 0 so a triplet will be observed

    C C

    OH

    H

    HH

    or

    C C

    HH

    H

    HO

    2ere n 1 / so a doublet will be observed

    C C

    CH

    H

    HO

    or

    C

    H

    H

    H

    O

    2ere n 1 ' so a singlet will be observed

    Consider a C20 group. This will account for a pea" with integration factor 0.

    CC

    H

    H

    H

    H

    OC

    or

    CCC

    H

    H

    H

    H O

    C

    2ere n 1 0 so a triplet will be observed

    C C

    HH

    H

    HH O

    C

    or

    C C

    HH

    H

    HH

    O

    2ere n 1 * so a quartet will be observed

    Thus the splitting of the pea"s gives much useful information about the splitting patterns

    in the molecule.

    %g Consider the following proton nmr spectrum$

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    The pea" at G 1 /.' is a triplet ;0 2 atoms on adEacent carbons4, with integration factor *.

    this suggests that it is caused by a C2* group adEacent to a C20 groupThe pea" at G 1 0.& is a singlet ;' 2 atoms on adEacent carbons4, with integration factor *.

    this suggests that it is caused by a C2* group attached to 3 or C13

    but if it were attached to 3 it would have a chemical shift of *.* &.' so it is probably caused by a C2*group attached to C13

    The pea" at G 1 0./ is a quartet ;* 2 atoms on adEacent carbons4, with integration factor 0.

    this suggests that it is caused by a C20 group attached as C2*C20C13 orC2*C203

    but if it were attached to 3 it would have a chemical shift of *.* &.'

    so it is probably caused by C2*C20C13

    !o the molecule is butanone$

    HC C

    H

    H

    C

    H

    H

    H C

    H

    H

    O

    1." 3Hn # 2 soit is a tri$let

    2.1 2Hn # 3 soit is a quartet

    2.% 3Hn # " soit is a sin&let

    2ydrogen bonded atoms do not contribute to coupling$

    %g consider the proton nmr spectrum of ethanol$

    C C OH

    HH

    H

    HH

    2.7 1H' sin&let

    3.7 2H' quartet1.2 3H' tri$let

    The pea" at G 1 /.0 is a triplet, with integration factor *. 5t is the C2*bonded to the

    C20.

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    The pea" at G 1 *. is a quartet. 5t is the C20 bonded to the C2*. 5t does not couple

    with the 2 attached to the 3, even though it is on an adEacent carbon atom, because this 2atom is involved in hydrogen bonding.

    The pea" at G 1 0. is a singlet, with integration factor /. 5t is the 2 bonded to the 3. 5tdoes not couple with the two C20 hydrogen atoms because it is involved in hydrogen

    bonding.

    Two important general points in particular should be noted$

    5f a triplet with integration factor * and chemical shift ' 0 is present, as

    well as a quartet with integration factor 0, then C2*C20 is almostcertainly present

    !inglet pea"s with integration factor / strongly suggest that an 32 bond

    is present

    e! Using car&on-*+ nmr spectra in structure determination

    Carbon/* nmr spectra are also useful for wor"ing out the structure of organic molecules,particularly if the molecular formula is "nown. 2owever they give less information about

    a molecule than proton nmr spectra.

    i4 the number of pea"s

    %ach pea" corresponds to one set of identical carbon atoms. The number of pea"s

    therefore gives the number of types of carbon atom present.

    5n some molecules, all the carbon atoms are identical. These molecules give only one

    pea" in the spectrum.%g ethane, methoxymethane, cyclohexane, ben

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    ii4 chemical shift

    The chemical shift depends on the environment around the carbon atomF in particular it isrelated to the proximity of electronegative atoms. The nearer a carbon atom is to an

    electronegative atom, the more deshielded it will be and the greater the chemical shift.

    Ior example, carbon atoms in al"anes tend to have low chemical shifts ;G 1 ' &'4, butcarbon atoms attached to 3 atoms with a double bond tend to have high chemical shifts

    ;G 1 /+' 00'4.

    All carbon atoms not directly attached a functional group ;ie singly bonded to only

    carbon or hydrogen atoms4 will have a chemical shift between ' and &' ppm4. The nearer

    an electronegative atom, the higher the chemical shift

    The following table summarises the important chemical shifts for 2 atoms in common

    environments close to a functional group$

    environment Type of molecule Chemical shiftppmC3 alcohol, ether, ester )' ='

    C1C al"ene, arene =' /)'

    C13 carboxylic acid,

    ester

    /+' /='

    2C1C Aldehyde, "etone /=' 00'

    %g consider the following carbon nmr spectrum of an alcohol with molecular formula

    C&2/'3$

    The spectrum gives three pea"s, so there must be three different carbon atoms. As thereare four carbon atoms in the molecule, two of them must be identical.

    3f the possible isomers of C&2/'3$

    utan/ol and butan0ol would give four pea"s ;all four C atoms are different4-ethylpropan/ol would give three pea"s ;two of the C atoms are identical4

    -ethylpropan0ol would give two pea"s ;three of the C atoms are identical4

    The spectrum is therefore most li"ely to come from methylpropan/ol.

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    USIN T.E ANA/#TICA/ TEC.NI0UES TOET.ER

    5f all the different spectra are available, then the most effective analytical strategy is touse them together. There are a number of useful steps to deducing the structure$

    5f composition data is available$

    /. #se the composition data to wor" out the empirical formula.

    0. #se the mass spectrum to deduce the relative molecular mass, and hence wor" outthe molecular formula.

    *. #se the infrared spectrum to chec" for the presence of C13 and 32 bonds, and

    hence identify the functional group.

    &. -a"e a list of the possible isomers consistent with the molecular formula andfunctional group.

    ). #se the number of pea"s in the proton nmr spectrum to deduce the number of

    hydrogen environments. %liminate the isomers inconsistent with this number.

    +. #se the integration factors in the proton nmr spectrum to wor" out the number ofhydrogen atoms in each environment. %liminate the isomers inconsistent with this

    distribution.. Compare the splitting of the pea"s in the nmr spectrum with the expected splitting

    patterns of the remaining possible isomers. %liminate the isomers which do not

    give this splitting pattern.D. 5f necessary, compare the chemical shifts of the pea"s in the nmr spectrum with

    the expected values. %liminate the isomers which are inconsistent with the

    chemical shifts.

    5f composition data is not available, the molecular formula must be found by a trial and

    error method.

    /. >educe the relative molecular mass from the mass spectrum.

    0. >educe the functional groups present from the infrared spectrum and hence

    establish the li"ely number of oxygen atoms present.*. Add up the integration factors in the proton nmr spectra. The number of hydrogen

    atoms present is an integral multiple of this number.

    &. #se the relative molecular mass and the information on hydrogen and oxygen

    atoms to deduce the molecular formula.

    A wor"ed example of combined analysis is given on the following page ;no composition

    data available4.

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    #se the following spectra to deduce the structure of A$

    -ass spectrum$ Jroton nmr spectrum$

    -olecular ion pea" 1 DD three pea"s$-ost intense fragments$ &*, 0=, &), +/, ' G 1 /.*, triplet, integration factor *

    G 1 0.', singlet, integration factor *

    G 1 &./, quartet, integration factor 0

    5nfrared spectrum$ sharp absorption at //) cm/, no broad absorptions between /)''and *)'' cm/

    ANS1ER2

    Irom mass spectrum, rmm 1 DDIrom infrared spectrum, C13 present

    Irom proton nmr spectrum, sum of integration factors 1 D

    !o D, /+ or 0& hydrogen atoms present and at least one oxygen5f one 3 atom present, remaining mass 1 +0 and cannot ma"e this using D/+0& 2 atoms

    5f two 3 atoms present, remaining mass 1 )+F can ma"e this from & carbons and 2

    hydrogens!o li"ely molecular formula 1 C&2D30.

    Irom infrared spectrum, no 32 is present, so it is not a carboxylic acid.

    !o is probably an ester.Jossible structures$

    -ethyl propanoate, ethyl ethanoate, propyl methanoate, methylethyl methanoate

    Irom proton nmr spectrum$

    There are * hydrogen environments so it cannot be propyl methanoate ;which has &4.

    The integration factors are *$*$0 so cannot be methylethyl methanoate ;which has the

    ratio +$/$/4.The coupling ;*2 triplet, 02 quartet, *2 singlet4 is consistent with both remaining

    possible structures.

    ut the *2 singlet has a chemical shift of 0.', which is consistent with C2*C3 and not

    C2*3 ;for which the chemical shift would be *.* &.'4

    The 02 quartet has a chemical shift of &./, which is consistent with C2*C203 and notC2*C20C3 ;for which the chemical shift would be 0.' 0.)4

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    !o it cannot by methyl propanoate and therefore the structure is ethyl ethanoate.

    Iull explanation of spectra$

    5nfrared spectrum$

    CH3 C

    O

    O CH2 CH3

    asors at 1715 cm)1

    Jroton nmr spectrum$

    CH3 C

    O

    O CH2 CH3

    2."' 3H' sin&let

    %.1' 2H' quartet

    1.3' 3H' tri$let

    -ass spectrum$

    CH3 C

    O

    O CH2

    CH3

    stale carocations*ith m, # 15

    stale carocations*ith m, # 29

    stale ac-lium*ith m, # %3

    7C2*C33C20C2*89:is the molecular ion pea"

    7C2*C33C20C2*89:7C2*C38

    99 73C20C2*8:accounts for the pea" at m< 1 &*

    7C2*C33C20C2*89:7C2*C208

    99 7C2*C338:accounts for the pea" at m< 1 0=

    7C2*C33C20C2*89:7C2*8

    99 7C2*C33C208:accounts for the pea" at m< 1 /)

    7C2*C33C20C2*89:7C2*8

    99 7C33C20C2*8:accounts for the pea" at m< 1 /)

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    C.ROMATORA".#

    Chromatography is a technique by which different compounds in a mixture can beseparated and then analysed. There are two main types of chromatography$

    t%in-layer c%romatograp%y5n thinlayer chromatography a liquid solvent is allowed to flow up a piece of

    chromatography paper or a TLC plate. The mixture is placed in a small area on

    the paper and allowed to flow up the paper with the solvent. >ifferent substancesmove at different speeds, and the distance travelled by that substance compared to

    the solvent can be used to identify the substance.

    gas-li3uid c%romatograp%y5n gasliquid chromatography a gaseous mixture is allowed to flow through a

    column lined with a solid. Holatile liquids can also be vaporised and then allowed

    to flow through the column. >ifferent gases ta"e different amounts of time to flow

    through the column, and this can be used to identify the gas ;or volatile liquid4

    The mixture of substances moving through the column ;or up the plate4 is called the

    mo&ile p%ase. The substance lining the column ;or the plate4 is "nown as the stationary

    p%ase.

    The speed at which each substance moves through the column or up the plate depends on

    its relative solubility in the two phases.

    5n gasliquid chromatography, a substance that is strongly attracted to the stationaryphase will move slowly through the column and ta"e a long time to pass through the

    column. A substance which is not strongly attracted to the stationary phase will move

    more quic"ly through the column and ta"e less time to pass through the column.