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COVID-19 Report Run on April 3, 2020 TRINETX COVID-19 _______________________________________________________________________________ 2019-nCoV (COVID-19) Real-World Data Report EMEA Issue 7 Run on October 21, 2020

TRINETX COVID-19...2020/10/21  · COVID-19 Report • Run on October 21, 2020 6 Clinical Characteristics During COVID-19 Episode All COVID-19 Patients Severe COVID-19 Patients n=53,760

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Page 1: TRINETX COVID-19...2020/10/21  · COVID-19 Report • Run on October 21, 2020 6 Clinical Characteristics During COVID-19 Episode All COVID-19 Patients Severe COVID-19 Patients n=53,760

COVID-19 Report • Run on April 3, 2020 Run by Juliet Winfred on JULY 31, 2019 – 4:15 PM

TRINETX

COVID-19 _______________________________________________________________________________

2019-nCoV (COVID-19) Real-World Data Report

EMEA Issue 7 Run on October 21, 2020

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COVID-19 Report • Run on October 21, 2020

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CONTENTS

CONTENTS ................................................................................................................................... 2

OVERVIEW ................................................................................................................................... 3

NETWORK CHARACTERISTICS ......................................................................................................... 3

COHORT SUMMARY ...................................................................................................................... 3

CLINICAL FINDINGS ....................................................................................................................... 4

COVID-19 Patient Density Map ................................................................................................... 4

Demographics and Prior/Coexisting Conditions of COVID-19 Patients ............................................. 5

Clinical Characteristics During COVID-19 Episode .......................................................................... 6

Treatment Pathway of COVID-19 Patients .................................................................................... 7

MAJOR OUTCOMES ...................................................................................................................... 8

Kaplan-Meier Survival Curve for All-Cause Mortality ..................................................................... 9

CLINICAL SPOTLIGHT ..................................................................................................................... 9

APPENDIX ...................................................................................................................................10

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OVERVIEW TriNetX is the global health research network that connects the world of drug discovery and

development from pharmaceutical company to study site, and investigator to patient by

sharing real-world data to make clinical and observational research easier and more efficient.

This report summarizes critical information about the characteristics, treatments, and

outcomes of COVID-19 patients identified in our network and will be updated on an ongoing

basis.

NETWORK CHARACTERISTICS

This report includes data from the TriNetX EMEA network, representing electronic medical

record (EMR) data from 28 healthcare organizations (HCOs) across 8 countries in Europe and

the Middle East, representing over 12 million patients. A subset of HCOs on the EMEA network

allow for advanced analytics to be run.

COHORT SUMMARY

Potential COVID-19 patients were identified using on a combination of ICD-10 diagnostic terms

and confirmatory laboratory results occurring on or after January 1, 2020 (See Appendix A).

TriNetX identified 53,760 potential COVID-19 patients as of October 21, 2020. From this cohort

of all potential COVID-19 patients, we identified a sub-cohort of 15,130 severe patients who

were hospitalized within one month on or after the first instance of COVID-19 in their EMR.

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CLINICAL FINDINGS

COVID-19 Patient Density Map

Country Patients Percent of Cohort

Spain 38,610 72%

United Kingdom 4,790 9%

Italy 4,300 8%

Israel 2,940 5%

Belgium 1,310 2%

Germany 1,260 2%

Poland 490 1%

Bulgaria 70 0.1%

United Kingdom Germany

Spain

Israel

Italy

Bulgaria

Belgium

Poland

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PATIENT CHARACTERISTICS

Demographics and Prior/Coexisting Conditions of COVID-19 Patients

All COVID-19 Patients Severe COVID-19 Patients

Demographics n=53,760 n=15,130

Age, years (mean ± SD) 53 ± 21 63 ± 19

10 - 19 (n, %) 2,850 5.3 280 1.9

20 – 29 (n, %) 5,680 10.6 640 4.2

30 – 39 (n, %) 6,970 13.0 990 6.5

40 – 49 (n, %) 8,310 15.5 1,570 10.4

50 – 59 (n, %) 8,840 16.4 2,490 16.5

60 – 69 (n, %) 7,110 13.2 2,650 17.5

70 – 79 (n, %) 6,390 11.9 2,920 19.3

≥80 (n, %) 7,640 14.2 3,620 23.9

Male Sex (n, %) 26,030 48.4 8,440 55.8

Female Sex (n, %) 27,270 50.7 6,660 44.0

n=23,210 n=13,770

Prior or Coexisting Condition1 n % n %

Respiratory diseases 4,920 21.2 3,880 28.2

COPD 900 3.9 770 5.6

Asthma 760 3.3 480 3.5

Seasonal allergies* 90 0.2 30 0.2

Cardiovascular diseases 5,720 24.6 4,550 33.0

Hypertension 3,600 15.5 2,830 20.6

Congestive heart failure 1,160 5.0 1,010 7.3

Angina pectoris 590 2.5 440 3.2

Myocardial infarction 400 1.7 350 2.5

Cancer* 3,150 13.6 1,710 12.4

Diabetes 2,000 8.6 1,610 11.7

Kidney disease 1,110 4.8 920 6.7

HIV 50 0.2 40 0.3

1 Data as of October 21, 2020. Diagnoses captured any time to one day before first instance of COVID-19 in EMR. Except

where noted with an asterisk (*), diagnosis data was captured using Characteristics in the TriNetX platform from a subset of

HCOs that allow for the platform’s advanced analytics to be run. For the conditions marked with an asterisk, data was

captured using Query Builder and the percentage is calculated based on the total number of patients in the base cohort and

sub-cohort of severe patients.

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Clinical Characteristics During COVID-19 Episode

All COVID-19 Patients Severe COVID-19 Patients

n=53,760 n=15,130

Diagnosis2 n % n %

Pneumonia 18,660 34.7 9,410 62.2

Renal failure 2,400 4.5 1,350 8.9

Hypotension 1,550 2.9 1,320 8.7

Acute lower respiratory infections 1,280 2.4 500 3.3

Fever 1,060 2.0 690 4.6

Acute respiratory distress syndrome (ARDS) 880 1.6 420 2.8

Diarrhea 740 1.4 320 2.1

Shortness of breath 620 1.2 400 2.6

Cough 560 1.0 340 2.2

Pain in throat and chest 560 1.0 240 1.6

Bronchitis 150 0.3 60 0.4

Hepatic failure 130 0.2 70 0.5

Loss of taste or smell 100 0.2 50 0.3

Clinical Setting2 n % n %

Emergency 17,370 32.3 8,800 58.2

Inpatient 16,580 30.8 15,130 100.0

Medication3 n % n %

Antibiotics 7,730 14.4 6,760 44.7

Antimalarials 3,460 6.4 3,070 20.3

Glucocorticoids 4,130 7.7 3,650 24.1

Antivirals 1,530 2.8 1,320 8.7

Interleukin Inhibitors 800 1.5 730 4.8

2 Diagnoses and clinical setting captured in EMR one week before to one month after first instance of COVID-19 in EMR.

3 Medications captured in EMR one day before to one month after first instance of COVID-19 in EMR.

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Treatment Pathway of COVID-19 Patients

The sunburst diagram shows the top ten individual or combination therapies used to treat potential COVID-19 patients. Here a line of therapy is defined as any treatments taken within 1 day. Treatment pathways were analyzed from the first instance of COVID-19 in EMR until October 21, 2020.

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MAJOR OUTCOMES4

All COVID-19 Patients Severe COVID-19 Patients

n=33,120 n=7,480

Laboratory Data5 Mean ± SD Mean ± SD

Complete Blood Count

Hemoglobin, g/dL 13.5 ± 1.9 13.0 ± 1.9

Hematocrit, % 39.9 ± 5.2 38.7 ± 5.4

RBC, 106 cells/µL 4.5 ± 0.6 4.3 ± 0.7

Platelet Count, 103 cells/µL 265.8 ± 121.7 288.1 ± 140.8

WBC, 103 cells/µL 7.2 ± 4.5 7.6 ± 5.4

Eosinophils, % 2.0 ± 2.4 2.0 ± 2.6

Metabolic

Creatinine, mg/dL 0.9 ± 0.8 1.0 ± 0.9

Hepatic

ALT, U/L 40.1 ± 64.8 48.1 ± 82.7

AST, U/L 40.0 ± 58.9 35.8 ± 77.1

Alk Phos, U/L 84.1 ± 59.5 88.7 ± 66.0

Total bilirubin, mg/dL 0.5 ± 0.4 0.5 ± 0.5

Inflammatory

C Reactive Protein, mg/L 5.9 ± 21.4 7.2 ± 23.2

IL-6, pg/mL 157.0 ± 771.4 190.9 ± 851.7

Mortality6 n % n %

All-cause mortality 1,580 4.8 1,310 17.5

n=53,760 N=15,130

Care and Management5 n % n %

Hospitalization 21,940 40.8 15,130 100.0

Chest radiology (e.g., x-ray, CT, MRI) 12,730 23.7 4,950 32.7

Abnormal finding on imaging of lung7 120 0.9 70 1.4

Mechanical ventilation (including ECMO) 1,130 2.1 540 3.6

Follow-up time at least 14 days 17,420 32.4 8,050 53.2

Follow-up time at least 21 days 15,540 28.9 7,390 48.8

Follow-up time at least 28 days 14,150 26.3 6,880 45.5

4 Laboratory data and mortality are calculated from a subset of HCOs that allow for the platform’s advanced analytics to be

run. 5 Laboratory and care and management variables captured in EMR on same day to one month after first instance of COVID-19

in EMR. Laboratory data are of patients’ most recent laboratory results in this time window. Not all patients have laboratory data.

6 All-cause mortality captured in EMR on same day to two months after first instance of COVID-19 in EMR. 7 Abnormal finding on imaging of lung is an ICD-10 term (R91). Percentages are calculated among patients with chest

radiology performed.

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Kaplan-Meier Survival Curve for All-Cause Mortality

The Kaplan-Meier curve shows the survival probability among all COVID-19 patients and severe COVID-19 patients. All-cause mortality was analyzed from the first instance of COVID-19 up to 2 months after, through October 21, 2020.

CLINICAL SPOTLIGHT

Each issue of the 2019-nCoV (COVID-19) Real-World Data Report spotlights real-world insights

generated in the TriNetX platform or datasets.

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APPENDIX

Appendix A: COVID-19 query in TriNetX

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Appendix B: Distribution of age and sex

APPENDIX C: COVID-19 Publications Using TriNetX Data

• Annie, F.H., Sirbu, C., Frazier, K.R., Broce, M. and Lucas, B.D. (2020), Hydroxychloroquine in

hospitalized COVID‐19 patients: Real world experience assessing mortality. Pharmacotherapy.

Accepted Author Manuscript. doi:10.1002/phar.2467

• Desai A, Mills A, Delozier S, et al. (September 12, 2020) Pediatric Patients with SARS-CoV-2

Infection: Clinical Characteristics in the United States from a Large Global Health Research

Network. Cureus 12(9): e10413. DOI 10.7759/cureus.10413

• Nalleballe, K., Siddamreddy, S., Kovvuru, S., Veerapaneni, P., Roy, B., & Onteddu, S. (2020). Risk

of COVID-19 from hospital admission during the pandemic. Infection Control & Hospital

Epidemiology, 1-7. doi:10.1017/ice.2020.1249

• Annapureddy, N., Nalleballe, K., Onteddu, S.R. et al. Biologics in systemic autoimmune diseases

during COVID-19 pandemic. Clin Rheumatol (2020). https://doi.org/10.1007/s10067-020-05439-

z

• Abstract S10-03: “Increased risk of COVID-19-related death among cancer survivors.” Jie Shen

and Hua Zhao. Clin Cancer Res September 15 2020 (26) (18 Supplement) S10-03; DOI:

10.1158/1557-3265.COVID-19-S10-03

• Nalleballe K, Siddamreddy S, Sheng S, et al. (September 03, 2020) Coronavirus Disease 2019 in

Patients With Prior Ischemic Stroke. Cureus 12(9): e10231. doi:10.7759/cureus.10231

• Harrison S, Fazio-Eynullayeva E, Lane D, et al. (2020.) Co-morbidities Associated with Mortality

in 31,461 Adults with COVID-19 in the United States: A Federated Electronic Medical Record

Analysis. Accepted to PLOS Medicine.

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• Singh S, Khan A, Chowdhry M, et al. (2020). Risk of Severe COVID-19 in Patients with

Inflammatory Bowel Disease in United States. A Multicenter Research Network Study. Published

in Gastroenterology. DOI: https://doi.org/10.1053/j.gastro.2020.06.003

• Hadi Y, Naqvi S, Kupec J, et al. (2020). Characteristics and outcomes of COVID-19 in patients with

HIV, AIDS. Volume Publish Ahead of Print - Issue - doi: 10.1097/QAD.0000000000002666.

• Singh S, Chowdhry M, Chatterjee A, et al. (2020). Gender-Based Disparities in COVID-19 Patient

Outcomes: A Propensity-matched Analysis medRxiv preprint.

https://doi.org/10.1101/2020.04.24.20079046

• Griffith DM, Sharma G, Holliday CS, et al. (2020). Men and COVID-19: A Biopsychosocial

Approach to Understanding Sex Differences in Mortality and Recommendations for Practice and

Policy Interventions. Prev Chronic Dis. doi:10.5888/pcd17.200247

• Khan A, Chatterjee A, Singh S (2020). Comorbidities and Disparities in Outcomes of COVID-19

Among African American and White Patients. medRxiv 2020.05.10.20090167; doi:

https://doi.org/10.1101/2020.05.10.20090167

• Shailendra Singh, Mohammad Bilal, Ahmad Khan, Monica Chowdhry, Sergio A. Sánchez-Luna,

Gursimran S. Kochhar, Diogo Turiani Hourneaux de Moura, Christopher C. Thompson.

• Singh S, Bilal M, Khan A, et al. (2020). Outcomes of COVID-19 in Patients with Obesity in United

States: A Large Research Network Study. Lancet pre-print.

• Onteddu SR, Nalleballe K, Sharma R., et al. (2020). Underutilization of Healthcare for strokes

during the COVID-19 outbreak. International Journal of Stroke, 1747493020934362.

• Annie F, Bates MC, Nanjundappa A, et al. (2020). Prevalence and outcomes of acute ischemic

stroke among patients≤ 50 years of age with laboratory confirmed COVID-19 infection. American

Journal of Cardiology. , doi: https://doi.org/10.1016/j.amjcard.2020.06.010

• Singh S, Khan A, Chowdhry M, et al. (2020). Outcomes of hydroxychloroquine treatment among

hospitalized COVID-19 patients in the United States - real-world evidence from a federated

electronic medical record network. medRxiv.

• Ranabothu S, Onteddu S, Nalleball K, et al. (2020). Spectrum of COVID‐19 in Children. Acta

Paediatrica https://doi.org/10.1111/apa.15412

• Nalleballe K, Reddy Onteddu S, et al. (2020) Spectrum of neuropsychiatric manifestations in

COVID-19 [published online ahead of print, 2020 Jun 17]. Brain Behav Immun. S0889-

1591(20)31008-4. https//doi:10.1016/j.bbi.2020.06.020

• London JW, Fazio-Eynullayeva E, Palchuk MB, Sankey P, McNair C. (2020). Effects of the COVID-

19 pandemic on cancer-related patient encounters. JCO Clinical Cancer Informatics, 4, 657-665.

• Singer ME, Kaelber DC, Antonelli MJ (2020). Hydroxychloroquin ineffective for COVID-19

prophylaxis in lupus and rheumatoid arthritis. Annals of the Rheumatic Diseases.

https://ard.bmj.com/content/annrheumdis/early/2020/08/05/annrheumdis-2020-

218500.full.pdf

• Singh S, Khan A. (2020) Clinical characteristics and outcomes of COVID-19 among patients with

pre-existing liver disease in United States: a multi-center research network study,

Gastroenterology, doi: https://doi.org/10.1053/j.gastro.2020.04.064.

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• Turk MA, Landes SD, Formica MK, & Goss KD (2020). Intellectual and developmental disability

and COVID-19 case-fatality trends: TriNetX analysis. Disability and health journal, 100942.

Advance online publication. https://doi.org/10.1016/j.dhjo.2020.100942

• Alkhouli M, Nanjundappa A, Annie F, et al. (2020) Sex differences in COVID-19 case fatality rate:

insights from a multinational registry. Mayo Clin Proc. 2020;95(x):xx-xx. doi:

https://doi.org/10.1016/j.mayocp.2020.05.014.