Fundamental Microbiology

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    Fundamental Microbiology

    CH2a: Subdivision of Microbiology

    CH2b: Microbial Noemnclature

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    Chapter Objectives

    Differentiate bacteria, viruses, fungi,

    protozoans, and parasites of medical

    importance based on fundamental features

    and characteristics

    Compare the fundamental features of

    selected pharmaceutical important

    microorganisms

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    Basics of Microbiology

    Divisions

    Nomenclature

    Microbial Metabolism

    Cultivation

    Enumerating Microorganisms

    Microbial Genetics

    Pharmaceutical Important Microorganisms

    Preservation of Microorganisms

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    DIVISIONS OF MICROBIOLOGY

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    Eukaryotes vs Prokaryotes

    Structural Characteristics Nuclear

    Membrane

    Mode of Reproduction

    p11 (table 2.1)

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    Characteristics Eukaryotes Prokaryotes

    Size Normally > 10um 1 5 um

    Location of Chromosomes Within nuclear membrane Cytoplasm

    Nuclear Division Mitosis and meiosis Mitosis and meiosis are absent

    Nucleolus Present Absent

    Reproduction Asexual or sexual Asexual

    Chromosome number >1 1

    Mitochondria and chloroplasts May be present Absent

    Cell membrane composition Sterols present Sterols absent

    Cell wall composition Cellulose or chitin but not

    peptidoglycan

    Walls usually contain

    peptidoglycan

    Ribosomes 80s 70s (smaller)

    Flagella Complex Simle

    Pili Absent Present

    Fimbrae Cilia Present

    Storage Compounds Poly-B-hydroxybutyrate absent Poly-B-hydroxybutyrate often

    present

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    Prokaryotes

    Peptidoglycan cellwalls

    Binary fission

    For energy, useorganic chemicals,

    inorganic chemicals,

    or photosynthesis

    Bacteria

    Figure 1.1a

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    Prokaryotic

    Lack peptidoglycan

    Live in extremeenvironments

    Include:

    Methanogens Extreme halophiles

    Extreme thermophiles

    Archaea:

    Halobacteria not

    from book

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    Eukaryotes

    Chitin cell walls

    Use organicchemicals for energy

    Molds and

    mushrooms aremulticellular

    consisting of masses

    of mycelia, which are

    composed of

    filaments called

    hyphae

    Yeasts are unicellular

    Fungi

    Figure 1.1b

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    Eukaryotes

    Absorb or ingestorganic chemicals

    May be motile via

    pseudopods, cilia, orflagella

    Most free some

    parasites

    Protozoa

    Figure 1.1c

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    Eukaryotes

    Cellulose cell walls

    Use photosynthesis for

    energy (primary

    producers)

    Produce molecular

    oxygen and organic

    compounds

    Metabolically diverse

    Algae

    Figure 1.1d

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    Acellular

    Consist of DNA or

    RNA core

    Core is surrounded bya protein coat

    Coat may be enclosed

    in a lipid envelope

    Viruses are replicated

    only when they are in

    a living host cell

    Viruses

    Figure 1.1e

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    Eukaryote

    Multicellular

    animals

    Parasitic

    flatworms and

    round worms are

    called helminths.

    Microscopic

    stages in life

    cycles.

    Multicellular Animal Parasites

    Figure fluke

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    MICROBIAL NOMENCLATURE

    Writing Scientific Names

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    Aristotle

    Attempted to classify all living things as either

    Plant or Animals

    By location

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    Carl Linnaeus

    1700s

    Developed the naming system using Latin and

    Greek Names

    Systema Naturae (1973)

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    four different sources of names

    Descriptive

    ScientistsName

    Geographic Places Organization

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    Descriptive

    Staphylococcus aureus (grape-likecluster of spheres, golden in color),

    Streptococcus viridans (chains ofspheres, green in colony color),

    Proteus vulgaris (first and common),

    Helicobacter pylori (spiral shapedrod at the entrance to theduodenum)

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    Scientists names

    Escherichia coli (Theodor Esherich),

    Erlichia (Paul Erlich),

    Nessieria (Albert Neisser),

    Listeria (Joseph Lister), Pasturella (Louis Pasteur),

    Yersinia (AlexandreYersin),

    Bartonella (Alberto Barton),

    Morganella (H. de R. Morgan),

    Edwardsiella (P. R. Edwards)

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    Geographic places

    Legionella longbeachiae (Long Beach,California),

    Pasturella tularensis (Tulare County, California),

    Pseudomonas fairmontensis (Fairmount Park,Pennsylvania),

    Mycobacterium genavense (Geneva,Switzerland),

    Blastomyces brasiliensis (Brazil), Providencia spp. (Brown University, Providence,

    RI)

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    Organizations

    Legionella (American Legion),

    Afipia felis (Air Force Institute ofPathology),

    Cedecea spp. (Centers for DiseaseControl)

    Bilophila wadsworthia (VAWadsworth Medical Center in LosAngeles)

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    MICROBIAL METABOLISM

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    Bacterial Metabolism

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    Fungal Metabolism

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    Viral Metabolism

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    Parasitic Metabolism

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    MICROBIAL CULTIVATION

    Culture Media

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    MICROBIAL CULTIVATION

    Cultivation Methods

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    MICROBIAL GENETICS

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    PHARMACEUTICALLY IMPORTANTMICROORGANISMS

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    PRESERVATION OF MICROORGANISMS