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Systematic biology
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The Vertebrate Animals
Fish, Amphibian and Reptiles Post laboratory discussion
Dennis A. Dolojan
All Vertebrates are Chordates Phylum chordata!
• Chordates ALL have 4 characteristics sometime during their lives – a notochord
– nerve cord
– gill slits
– a tail
Phylum Chordata • Phylum Chordata includes the lancelets and tunicates (invertebrate chordates) as well as the vertebrates
• All chordates have:
Amphioxus
Characteristics of all Vertebrates
• Endoskeleton with a backbone for support of a dorsal nerve cord & muscle attachment
• Distinct skull/cephalization • Bilateral symmetry • 2 pairs of jointed appendages • Coelom • Closed circulatory system & chambered
heart
CartilageBonyAmphibianReptileBirdMammal
Comparative Numbers of Species
Classes of Vertebrates • Jawless fish
• Cartilaginous Fishes
• Bony Fish
• Amphibians
• Reptiles
• Birds
• Mammals
Major Groups of Vertebrates
• Fish – aquaCc tetrapods with scales, gills, & 2 chambered hearts
• Agnathans – jawless fishes – hagfish and lampreys
• Chondrichthyes – carClagenous fish -‐ sharks & rays
• Osteichthyes – bony fish – mahi-‐mahi, Clapia, halibut, puffer fish, tetras, guppies
• Amphibians – semiaquaCc tetrapods with split lives & 3-‐chambered hearts
• Anura – “tailless ones” – frogs & toads
• Urodela – “tailed ones” – salamanders & newts
• Apoda – “legless ones” -‐ caecilians
• Rep-les – terrestrial amniote tetrapods with scales & lungs & 3-‐ish to 4 chambered hearts
• Squamata – lizards and snakes
• Testudines – turtles & tortoises
• Crocodilia – alligators, crocodiles, and related species
• Birds – terrestrial amniote tetrapods with feathers & lungs & 4 chambered hearts
• RaCtes – ostriches, emus, kiwis
• Passeriformes – perching birds – jays, sparrows, crows, etc.
• AquaCc birds – ducks, swans, geese • Raptors – eagles, falcolns, hawks • Penguins
• Mammals – terrestrial amniote tetrapods with lungs, hair and mammary glands & 4 chambered hearts
• Monotremes – echidna and platypus
• Marsupials – koala, kangaroo, opossom
• Placentals – humans, bears, Cgers, giraffes, deer, pigs, dogs, cats, raccoons, squirrels, whales, walruses, manatees, etc
Fish
• Class Agnatha (Jawless Fish) – Subclass Cyclostomata (hagfish and lampreys)
• Class Chondrichthyes (carClaginous fish) – Subclass Elasmobranchii (sharks and rays)
• Class Osteichthyes (Bony fishes) – Subclass AcCnopterygii (ray finned fishes) – Subclass Sarcopterygii (flessy finned fishes,
ancestors of tetrapods)
Fish Vocabulary • Gill – respiratory structure that uses countercurrent exchange to extract oxygen from water
• Operculum – gill covering in bony fish
• Lateral line -‐ a row of microscopic organs sensiCve to pressure changes, can detect low frequency vibraCons.
• Swim bladder – internal, air-‐filled sac that acts as an organ for buoyancy in bony fish; sharks have oils in their livers to help them remain buoyant
• Scale – small, platelike structure covering an organism (or parts of an organism); sharks, fish, repCles, and birds all have different types of scales
• Fin – paired appendage found on fish used for locomoCon and steering
• ReproducCon
• External ferClizaCon – release of gametes to the environment where ferClizaCon takes place; bony fish
• Internal ferClizaCon – deposiCon of sperm in the female reproducCve tract where ferClizaCon takes place; sharks
• Hermaphrodite – some organisms are capable of producing both male and female gametes; few are capable of self-‐ferClizaCon; most exchange sperm; evoluConary adaptaCon for solitary and slow-‐moving or sessile organisms
• Ovoviviparous = eggs are ferClized inside the parent and hatch inside the parent and are born live
– Oviparous = eggs are laid in a nest or in the ground and hatch
– Viviparous = internal ferClizaCon with live born young (as soon as the egg is ferClized, it becomes an embryo and develops as a fetus).
Class Agnatha Hagfish and lampreys
- Jawless & finless - Skeleton of cartilage - Reproduce sexually - Gills - 2 Chambered Heart - Oviparous
Hagfish – a detriCvore
Lamprey – an ectoparasite
Jawless Fish
Class Chondrichthyes – sharks and rays
- Endoskeleton made of cartilage - Paired fins - Jaws - 2 chambered heart - Well-developed sense of sight and smell - Lateral line system (for sensing pressure
changes – vibrations - in water); whole body acts as an “ear”
- unique scales; teeth may be modified scales
- Oviparous, ovoviviparous, and a few are viviparous
- Internal fertilization using claspers to deposit sperm in female reproductive tract
Cartilage Fish
• Sharks, skates, rays
• 750 species
• Ventral mouth
• Spiral valve increases surface area
• Massive liver (up to half body weight)
• skin with tooth-like scales
Sharks have a unique digesCve structure called spiral valve that increases surface area
Sharks & some rays are carnivores
Rays (and the largest sharks) are suspension feeders
Can detect electrical fields of living organisms with special pores in their skin (not the same as the lateral line system which they also have)
Cartilage Fish
Class Osteichthyes
Tuna, perch, bass, clown fish, eels, seahorses, goldfish, catfish, etc…. * One of the most successful groups on Earth – ever!
- Endoskeleton made of bones - Swim bladder - Usually, external fertilization & oviparous (think caviar) - Lateral line system - Scales different from those in sharks - 2 chambered heart (all fish!) - Water balance important; some fish excrete salt through their
gills, others very watery nitrogenous waste using kidneys
Bony Fish
• 20-30,000 species
• Appeared 400 million years ago
• Cold blooded, flat scales, swim bladder
• gills and gill cover
• Most lay eggs
• eyes usually on the side of the head
Above: internal anatomy of a ray-‐finned fish
leb -‐ photo of a lobe-‐finned fish; right – photo of a lungfish
Three main groups of Osteichthyes – bony fish
AquaCc tetrapods gave rise to the first amphibians, who probably came on land in search of food (abundant plant and arthropod species in Devonian)
Bony Fish
Taxonomic hierarchy: Kingdom: Animalia Phylum: Chordata Subphylum: Vertebrata Class: Actinopterygii (formerly Osteichthyes)
Order: Cypriniformes Family: Cyprinidae Genus: Cyprinus Species: carpio (common carp)
additional standardized endings:
Suborder: - oides Subfamily: - inae Tribe: - ini
Which traits do I use?
Tools of taxonomy: morphometrics - measurements relative to length meristics - counts
Morphometric/ merisCc
• Total Length (TL) • Standard length (SL) • Head Length (HL)-‐ • Body depth • Length of the pectoral and of pelvic fin • Number of fin rays (spines and sob rays)
Tools of taxonomy: anatomical traits - shape, presence/absence
• Scales – Placoid scales: rdermal denCcles (similar to teeth) – Ganoid scales: flat, basal-‐looking scales – Cycloid scales: oval-‐shaped scales w/ growth rings (carps)
– Ctenoid scales: disCnguised by spines that cover one edge (Cichlids)
• Tails – Crescent-‐shaped – Forked shaped – Rounded – Truncated
• Caudal fin shape – Homocercal tail – Heterocercal tail – Non-‐differenCated caudal fin
• Mouth – Terminal – Up-‐poinCng – Sub-‐terminal – Specialized (seahorse)
Tools of taxonomy: color patterns
white crappie (Pomoxis annularis) black crappie (Pomoxis nigromaculatus)
Pigments: Melanophores-‐ Brownish-‐black pigment called melanin Erythrophores-‐Red pigment Xanthosphores-‐ Yellow Pigment Iridophores-‐ contain crystals which refract and reflect light, given many fish their metallic
• Body Shapes – Fusiform – Laterally depressed – Depressed – Elongated or Eel-‐like
Tools of taxonomy: physiological differences (e.g., temperature preferences) behavior diet
steelhead trout (Oncorhynchus mykiss) rainbow trout (Oncorhynchus mykiss)
lake trout (Salvelinus namaycush)
Use of standardized descriptions: Round goby, Neogobius melanostomus (Pallas, 1811). D1 VI (V‑VII); D2 I + 14‑16 (13‑16); A 1 + 11‑13 (11‑14); P 18‑19 (17‑20). Scaled on the parietal region, nape, back (all), throat (all or most), abdomen, pectoral fin peduncles, and one quarter of the gill covers. Scales on the middle and anterior nape are cycloid. Head is as wide as or wider than deep; depth is 0.9‑1.2 times the width. Head length 4.2‑4.5 of total body length. Angle of the jaw below the anterior quarter of the eye. Lower jaw not prominent. Snout 1.1‑1.4 times the orbit diameter. Upper lip narrows slightly to the rear. Usually 6, rarely 7, transverse suborbital series of pit organs. Ventral fins reach or almost reach the vent. Pelvic disk is 0.6‑0.8 times the abdomen length. If present, the anterior membrane width is very shallow, with rounded, lateral lobes. Caudal peduncle depth is about two‑thirds its length. Lacks a gas bladder and chemoreceptors.
Use of standardized descriptions: Round goby, Neogobius melanostomus (Pallas, 1811) D1 VI (V‑VII); D2 I + 14‑16 (13‑16); A 1 + 11‑13 (11‑14); P 18‑19 (17‑20). D1 VI (V‑VII); the anterior dorsal fin has 6 spines, ranging from 5‑7
D2 I + 14‑16 (13‑16); the posterior dorsal fin has one spine and 14‑16 soft rays, ranging from 13-16
A 1 + 11‑13 (11‑14); the anal fin has one spine, 11-13 soft rays, ranging from 11‑14
P 18‑19 (17‑20). the pectoral fins have 18-19 soft rays, ranging from 17‑20
Use of standardized descriptions: Round goby, Neogobius melanostomus (Pallas, 1811). D1 VI (V‑VII); D2 I + 14‑16 (13‑16); A 1 + 11‑13 (11‑14); P 18‑19 (17‑20). Scaled on the parietal region, nape, back (all), throat (all or most), abdomen, pectoral fin peduncles, and one quarter of the gill covers. Scales on the middle and anterior nape are cycloid. Head is as wide as or wider than deep; depth is 0.9‑1.2 times the width. Head length 4.2‑4.5 of total body length. Angle of the jaw below the anterior quarter of the eye. Lower jaw not prominent. Snout 1.1‑1.4 times the orbit diameter. Upper lip narrows slightly to the rear. Usually 6, rarely 7, transverse suborbital series of pit organs. Ventral fins reach or almost reach the vent. Pelvic disk is 0.6‑0.8 times the abdomen length. If present, the anterior membrane width is very shallow, with rounded, lateral lobes. Caudal peduncle depth is about two‑thirds its length. Lacks a gas bladder and chemoreceptors.
Amphibians
• 2000 species, appeared 350 million years ago.
• Cold-blooded, moist skin, lungs, no claws • Lay jellylike eggs
• Life cycle includes a larval stage • 90% are frogs and toads
Amphibian Vocabulary
Ectotherm – organism that must gain (or lose) heat from the environment to maintain body temperature; metabolism is NOT sufficient to heat the body; most invertebrates, fish, amphibians, & repCles
Endotherm – organism that maintains a stable body temperature through metabolism; few repCles, most birds and mammals, insects
Metamorphosis – change from a sexually immature stage to a sexually mature stage in the life cycle; involves change in body structure and niche; ex) tadpoles are herbivorous, aquaCc larvae with gills and no limbs that change into carnivorous, terrestrial adult frogs with lungs and 4 limbs
Tetrapod – vertebrate with 4 limbs located in pectoral and pelvic girdles
Lungs – internal respiratory organs that exchange gases across a membrane surface, usually in conjuncCon with the circulatory system
Cloaca – common opening to the outside of the body through which fecal material, nitrogenous waste and gametes pass; common to amphibians, repCles, and birds
Class Amphibia Frogs, toads, salamanders, and newts
- Ectotherms - Need H2O for breeding - Metamorphosis (tadpole à frog) - Gas exchange through moist skin & mouth; primitive
balloon-like lungs - External fertilization - Oviparous - 3-chambered heart - Many have chromatophores in the skin for coloration,
as well as poison glands for defense - Nitrogenous waste varies – aquatic habitat – dilute
urine; terrestrial, concentrated urine
Amphibians
3 major groups of amphibians:
Apoda – caecilians; legless
Anura – frogs & toads; tailless
Urodela – salamanders & newts
FROGS AND TOADS
• Frog skin smooth & moist for cutaneous respira-on • Toads is rough & warty with poison glands
CharacterisCcs of Frogs & Toads
• Both terrestrial & freshwater species • Tadpole with tail, gills, & two-‐chambered heart • Adults without a tail, four limbs, & lungs • Long hind limbs for jumping • Long, forked tongue hinged at front of mouth
Amphibians – Frogs & Toads ID Traits
Amphibians – Hind Feet
• a. True frogs – webbed toes • b. Tree frogs – toe pads & webbing • c. Toads – tubercles & no webbing • d. Spadefoot Toads – thorny projecCons(spade) and reduced webbing
Salamander ID features
Salamanders and Newts
• Have elongated bodies with a tail & 4 limbs • Smooth, most skin for cutaneous respira-on • Less able to stay on dry land than frog and toads • Nocturnal when live in drier areas • Newts are aqua-c species
Order Differences • Limbs • Tails • Vision • Fertilization
Size-Largest
-Chinese Giant Salamander-up to 180 cm -Goliath Frog-up to 32 cm
http://www.guardian.co.uk/environment/gallery/2008 www.sandiegozoo.org
Size-Smallest
Smallest- Thorius sp. - 15 mm. Eleutherodactylus sp.- 10 mm
http://www.science.psu.edu/alert/FROG.htm http://www.state.tn.us/twra/tamp/salamanders.htm
Reptiles
• 6500 species, appeared 300 million years ago.
• Cold-blooded, hard shelled eggs, internal fertilization
• Body covered with scales.
• Include crocodilians, lizards and snakes, turtles and the tuatara
Rep-le Vocabulary
AmnioCc egg – adaptaCon to terrestrial life that results in a water-‐proof egg with extra-‐embryonic membranes that aid in the vital funcCons of a living organism
ExCnct – all members of a species have died; ex) pterosaurs
Extant – members of a species are sCll alive
Bask – behavioral adaptaCon of ectotherms to increase body heat; involves moving to locaCons where more radiant energy (such as from the sun or warm rocks) is available for absorpCon
Class Reptilia turtles, snakes & lizards, crocodiles
- Ectotherms – bask and hide to regulate temperature* - Scaly, waterproof skin - Respire through lungs only** - Internal fertilization - Oviparous, ovoviviparous, viviparous (depending on species) - 3 or 4 chambered heart - Nitrogenous waste is a paste rather than a liquid for water
conservation; uric acid - Extinct reptiles include dinosaurs and pterosaurs, which
dominated the Earth during the Triassic period
Reptiles
AmnioCc egg in repCles
-‐ note leathery shell characterisCc of repClian eggs
Major extant groups of rep-les:
Squamata – snakes & lizards
• both snakes and lizards shed their skin as they grow
• Loss of legs is unique to snakes within the repCles; remnants of pelvic girdles present in boas, as are external claws on the abdomen
• many have unique adaptaCons for life as predators
• Jacobson’s organ – when a snake flicks its tongue it is collecCng molecules that are then brought in to Jacobson’s organ for “processing”; kind of a combined sense of taste and smell
• Pits – many snakes have heat sensory organs on their head that gives an IR picture of an organism, decreasing dependency on vision
• Hollow fangs – with or without poison glands for capturing, holding, and killing prey
• Muscles the length of the body allow it to move quickly and many use those muscles for immobilizing and strangling prey
Major extant groups of rep-les: (cont’d)
Testudines – turtles and tortoises
* Some are herbivorous, but most are carnivorous
• Lay eggs on land (oviparous) • Cloaca is secondary respiratory surface in aquaCc species ** • Shell is part of the body, connected to muscle and inCmately intertwined with the skeleton
Crocodilia – alligators and crocodiles (caiman, and other related species) • Adapted for aquaCc life with upturned nostrils and eyes on top of head
• endothermic*
• 4-‐chambered heart
• Related to feathered repCles
Major extant groups of rep-les: (cont’d)
crocodiles
American alligator
gharial
Snakes
• Venomous snakes-‐three fang types • Rear-‐fanged snakes (boomslang) • Front-‐fanged snakes (cobra) • Hinge-‐fanged snakes (raPlesnake, water moccasin, copperhead)
• ORen camouflaged for defense • May have defense signals as expanding hood of cobra, raPles of raPlesnakes or hissing
• May be oviparous or ovoviviparous
Snakes – ID features
Lizards
• Four limbs • Rely on speed, agility, & camouflage to catch prey • Feed on insects & small worms • Some, such as anole & chameleon, can change colors for
protec-on • May use ac-ve displays such as squir-ng blood, hissing, or
infla-ng bodies • Some can show autotomy (breaking off tail to escape predators) • Two poisonous U.S. species include Gila Monster & Beaded Lizard
Lizards – ID features