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Acknowledgements:
In Vitro- J. Denny; R. Kolanczyk; Barb Sheedy; Mark TapperStudents: R. Maciewski; W. Backe; M. Dybvig; M. MerenessPost-Doc: H. Aladjov
In Vivo- K. Flynn; D. Hammermeister; D. Lothenbach; F. Whiteman; Students: J. Nagel; W. BackePost-Doc: M. Haasch
QSAR
Inert/Antimicrobial Chemical
ER Binding
AlteredProtein
Expression
Altered proteins,
hormones;Ova-testis
Sex reversal;Altered
behavior;Repro.
Estrogen Receptor (ER) Toxicity PathwayChemical interacts with Receptor at Molecular Level,
Initiates a Series of events, and leads to Adverse Outcome
Toxicological Understanding
Risk Assessment Relevance
In vivo Assays
MOLECULARInitiating Event
CELLULARResponse
TISSUE/ORGANINDIVIDUAL
Skewed Sex
Ratios;Yr Class
POPULATION
In vitro Assays
ER Prioritization System – Establishing Chemical Categories
Test chemicals within FI and AM inventories for potential to bind ER to prioritize which chemicals, of hundreds EPA is required to evaluate, should go on for further testing. Focus in on the chemical likely to have the activity.
Predictions are needed for chemicals with little of no data
EPA problem is low affinity chemicals
ChemicalUniverse
Contains CycleYes Contains 2 OH,
or OH and =0, at Spec. Dist
Possible High Affinity,“A-B”; “A-C”; or
“A-B-C” type binder
Contains some attenuating feature
steric?; other?
High Binding Affinity “A-B”;“A-C” or “A-B-C” type
No
Non binder Ex: ProgesteroneCorticossterone(RBA<0.00001)
Special Rule Classes
Log Kow <1.3
Low Affinity Binder“A-B”,“A-C” or “A-B-C” type
Assess strength of attenuation steric?;
other?
Some
Complete
Contains at least
one possible
H-bonding site
Type “A”Contains Phenol
Fragment
• Alkyl Anilines• Phthalates• Branched Phenones• Cyclo Phenones• p-subst Cyclohexanols• p-subst Cyclohexanones• ring subst (o-CH3, tri-CH3) Benzoates
V
Possible Low AffinityBinder
Type “B”Contains identif. Type B
Fragment
• N-alkyl Phenones• Non ring subst Benzoates
• Alkyl Phenols • Alkoxy Phenols• Parabens• Salicylates
Belongs to known Active
class
Potency Rules / Equations
No
Potency Rules / Equations
No
Yes No
No
II
Needs testing
Yes
No
No
Yes
Yes
Belongs to class with possible
Type B low affinity under investigation
Belongs to known Inactive
class
IIIBelongs to
known Inactive class
• Fully-hindered Alkyl Phenols
Belong to untested classwith possible
Type A low affinity
• ring subst p-CH3 Benzoates•Thiophosphate Esters• Mixed Organics• Cyclic Alcohols (not p-subst hexanols)• Cyclic Pentanones/Others• Br, I halobenzenes
No
No
Yes
Belongs to known Active
class
Belong to untested class
Needs testing
Needs testing
Non binder(RBA<0.00001)
• Mixed Phenols
No
No
No
Yes
Yes
YesIII
Non binder(RBA<0.00001)
No
Belongs to known Inactive
class
Non binder(RBA<0.00001)
• Alkylbenzsulfonic Acids• Sulfonic Acid Dyes• p-Alkyl Fluorobenzenes• Bis–anilines• Alkoxy Anilines• Imidazolidines• Isothiazolines• Alkyl Benzthiols• Pyrrolidiones
IV
Yes
• Oxazoles• Benzamide• Furans• Sorbitans• Triazines
Yes
Yes
No
Yes
• DDT-Like• Tamoxifen-Like• Multi-Cyclohydrocarbons• Alkyl Chlorobenzenes
Will a chemical with rtER binding affinity 0.001 in our assay have ER-mediated effects in vivo?
How do you compare dosimetry and effects across in vitro and in vivo assay systems?
Dosimetry: Chemical concentration – How much? Where?Total Chemical Conc; Bound vs Free – internal bioavailabilityChemical Solubility
Effects: Biological Response; Toxicity
How do you compare data across levels of biological organization?
ER Toxicity Pathway
In vitroAssayEndpts
ER Binding
AlteredProtein
Expression
Chg 2ndry Sex Char
AlteredRepro.
Skewed Sex
Ratios,AlteredRepro.
MOLECULARInitiating Event
CELLULARRespopse
TISSUE/ORGANResponse
INDIVIDUALResponse
POPULATIONResponse
Altered proteins (VTG),
Ova-testis
In vivoAssay Endpts
ER Pathway
ER Binding
AlteredProtein
Expression
Chg 2ndry Sex Char
AlteredRepro.
Skewed Sex
Ratios,AlteredRepro.
MOLECULARInitiating Event
CELLULARRespopse
TISSUE/ORGANResponse
INDIVIDUALResponse
POPULATIONResponse
In vitroAssayEndpts
In vivoAssay Endpts
Troutcyto rtERBinding
MaleTrout Liver Slice Vtg Induction
Altered proteins (VTG),
Ova-testis
The in vitro Assays
rtER Binding – 3H-E2 displacementcytosolic fraction from M, F trout liverscytosol diluted in TEDG buffer (Tris, EDTA, dithiothreitol, glycerol);
avg protein = 4.6 mg/ml, ± 1.2, (range 3.4 - 8.8) N=97
rtER Liver Slice Vtg Induction precision cut trout liver slices incubated in 1.4ml of L-15 buffer (10% FBS);
~ 3 mg/ml protein
Alkyl Anilines rtER Binding
CTRL
0
10
20
30
40
50
60
70
80
90
100
110
120
-10 -9 -8 -7 -6 -5 -4 -3 -2
BA
E2
TBA
HALAAN
OA
ANL
EAPA
PT
Log Concentration (M)
[3H
]-E
2 B
indi
ng (
%)
Alkyl Anilines rtER Gene Expression
CTRL1.0×103
1.0×104
1.0×105
1.0×106
1.0×107
1.0×108
-10 -9 -8 -7 -6 -5 -4 -3 -2
TBABA
OA
AANHAL
PA
EA
PT
ANL
Log Concentration (M)
VT
G m
RN
A c
opie
s/40
0 ng
tot
al R
NA
NH2
CH3
4-n-amyl aniline
Comparison are made across the assay systems using one chemical RBA = 0.001
Concentration (logM)
-12 -11 -10 -9 -8 -7 -6 -5 -4 -3 -2 -1
[3H
]-E
2 B
ou
nd
(%
)
0
20
40
60
80
100
VT
G m
RN
A c
op
ies
/ 400
ng
to
tal R
NA
105
106
107
108
rtER cytosolic receptor binding - blue
rtER liver slice VTG - red
4-n-amylaniline
MED Analytical rt cytosol 4-n-amylaniline (AAN) [33228443]
-5.0
-4.0
-3.0
-2.7
-2.3 -2
1.28
5M
0.12
85M
0.01
285M
0.00
1285
M0
25
50
75
100
125
150
AAN2-0h
AAN2-20h
Cytosol nominal conc.
Per
cen
t o
f N
om
inal
Co
nce
ntr
atio
n
AAN [Slice] (nmoles/g liver)
0
200
400
600
800
1000
1200
1400
1600
1800
0 4 8 12 16 20 24 28 32 36 40 44 48
Time (hrs)
nm
ole
s/g
live
r
-4.3 logM (50 uM)
-4.0 logM (100uM)
Media + Slice
0
20
40
60
80
100
120
0 4 8 12 16 20 24 28 32 36 40 44 48
Time (Hrs)
[AA
N]
uM
-4.3 logM (50uM)
-4 logM (100uM)
-3.92
-4.69
LogM
Total vs. free concentration of octylphenol in an estrogenicity reporter gene assay
using SPME to measure “free” chemical
-9 -8 -7 -6 -5 -40
100000
200000
300000
4000005% serum20% serum50% serum
log nominal conc. (M)
resp
on
se
-9 -8 -7 -6 -5 -40
100000
200000
300000
4000005% serum20% serum50% serum
log free conc. (M)
resp
on
se
Heringa M.B. et al. Environ. Sci. Technol. 2004, 38, 6263-6270Picture from J. Hermens, Utrecht University
Nominal / total concentration
Free aqueous concentration
Dose
[Effect] protein “free” Solubility Limit(LogMolar) (mg/ml) fraction (LogMolar)
Water 0.97 -3.43
Cyto rtER EC50 -3.7 7 0.27 -2.88
Slice Vtg LOEC -4.3 3.1 0.20 -2.76 MaxEC -4.0 3.1 0.20 -2.76
4- n amyl aniline in: in vitro Assay Media
Concentration (logM)
-12 -11 -10 -9 -8 -7 -6 -5 -4 -3 -2 -1
[3H
]-E
2 B
ou
nd
(%
)
0
20
40
60
80
100
VT
G m
RN
A c
op
ies
/ 400
ng
to
tal R
NA
105
106
107
108
rtER cytosolic receptor binding - blue
rtER liver slice VTG - red
4-n-amylaniline
Binding EC50[free]= -3.7
Vtg maxEC[free]= -4.7
ER Pathway
ER Binding
AlteredProtein
Expression
Chg 2ndry Sex Char
AlteredRepro.
Skewed Sex
Ratios,AlteredRepro.
MOLECULARInitiating Event
CELLULARRespopse
TISSUE/ORGANResponse
INDIVIDUALResponse
POPULATIONResponse
In vitroAssayEndpts
In vivoAssay Endpts
Troutcyto rtERBinding
MaleTrout Liver Slice Vtg Induction
Altered proteins (VTG),
Ova-testis
Medaka Bioassay with p-n-amylaniline (AAN)
NH2
CH3
Generation
Weeks total 1 2 3 4 5 6 7 8 9 10
1 2 3F0
1 2 3 4 5 6 7 8F1
Development
Reproduction
Adults (F0) exposed for 21 d; Offspring (F1) exposed for 8 wks
Ctrl -7.18 -6.55 -6.16 -5.61 -5.06
21d-Lethality F0 MALE NOEC 50%
F0 FEMALE NOEC 25% 100%
Fecundity (eggs/female) F0 FEMALE NOEC LOEC:↓ ↓
Body Weight FO MALE LOEC:↓
F0 FEMALE NA
Liver Vitellogenin FO MALE LOEC
F0 FEMALE
Sex Reversal (M to F) FO MALE
Papil. Process
Body Weight F1 MALE NOEC LOEC:↓
F1 FEMALE NOEC LOEC:↓
Liver Vitellogenin F1 MALE NOEC LOEC:↑ ↑
F1 FEMALE NOEC LOEC: ↓ ↓
Sex Reversal (M to F) F1 MALE NOEC LOEC:↓ ↓
Papil. Process
Adults – 21d
Eggs from exposed adults hatched and raised thru 8 wk exposure – F1
ER mediated responses were observedSome genetic males had only ovarian tissue with no sign of testes
-4.87
96hr LC50Newly hatched
Lethality (reduced hatch) F1 M,F NOEC LOEC:↑
Pathology - FO MALE NOEC LOEC:↑
Spleen F0 FEMALE NOEC LOEC:↑
Pathology- FO MALE none
kidney hematopoesis F0 FEMALE none
Pathology - F1 MALE LOEC:↑
Spleen F1 FEMALE NOEC LOEC:↑
Pathology- F1 MALE NOEC LOEC LOEC
kidney hematopoesis F1 FEMALE NOEC
Additional pathology observed is indicative of aromatic amine toxicity (via metabolic activation)
ER Toxicity Pathway
In vitroAssayEndpts
Troutcyto rtERBinding
MaleTrout Liver Slice Vtg Induction
ER Binding
AlteredProtein
Expression
Chg 2ndry Sex Char
AlteredRepro.
Skewed Sex
Ratios,AlteredRepro.
MOLECULARInitiating Event
CELLULARRespopse
TISSUE/ORGANResponse
INDIVIDUALResponse
POPULATIONResponse
Altered proteins (VTG),
Ova-testis
In vivoAssay Endpts
Male MedakaLiver Vtg Induction
Female MedakaLiver Vtg decr.
Male MedakaChg in 2ndary sex characteristic; behavior?Papillary Processes
Male MedakaGonadComplete conversion to ovary
Female MedakaFecundityHatch
Sex ReversalGenetic Males to Phenotypic Females
ReproductiveImpairment, butis it EDC in F0??
Acute Toxicity – 4-n-pentyl aniline
In Vivo
96h LC50 96h LC50Species (mg/L) LogMolar SourceFathead minnow 4.3 -4.58 ASTER-calcMedaka 2.2 -4.87 MED-msrdTrout 1.7 -4.99 ASTER-calc
Activity = 96h LC50 = -4.87 =0.038 Water Solubility -3.45
21d LC50Species LogMolar SourceMedaka ~-5.3 msrd
Activity = 21d LC50 = -5.3 =0.014 Water Solubility -3.45
How do we factor in time component in comparing effects?
Chronic ER-mediated Endpoint
Vitellogenin Induction
In vitro – Liver slice conc where Vtg induction was observed Media = -4.0 LogM
In vivo – Lowest conc where Vtg Induction was observedWater = -6.16 LogM
Concentration (logM)
-12 -11 -10 -9 -8 -7 -6 -5 -4 -3 -2 -1
[3H
]-E
2 B
ou
nd
(%
)
0
20
40
60
80
100
VT
G m
RN
A c
op
ies
/ 400
ng
to
tal R
NA
105
106
107
108
rtER cytosolic receptor binding - blue
rtER liver slice VTG - red
4-n-amylaniline
In vivo uptake of 4-n-amylaniline in Medaka Liver (7 d)
Water Conc = 0.117 ppm; -6.14 LogMolarBCF =160
Medaka VTG induction in Males, [Water Conc]= -6.16 Estimate Liver Conc as 160 times Water Conc = -3.95
Trout Liver Slice Media Conc for Vtg induction = -4.0
We don’t have a measured free concentration in Medaka blood (although it can be estimated from Log Kow), but we do have a measured free fraction of AAN in slice media = 0.20.
Correcting Vtg Induction conc for free fraction = -4.7
Activity = Effect conc (“free”) = -4.7 = 0.056 Water Solubility -3.45
AlkylAnilines
-8
-7
-6
-5
-4
-3
-2
-1
0
0 1 2 3 4 5 6 7 8Log Kow
Wat
erS
olu
bil
ity,
Bin
din
g E
C50
"fr
ee",
Sli
ce V
tg "
free
" (L
og
Mo
lar)
Water Solubility Binding EC50 (free) Liver Slice VTG FHM LC50 FHM MATC
AlkylPhenols
-8
-7
-6
-5
-4
-3
-2
-1
0
0 1 2 3 4 5 6 7 8Log Kow
Wat
erS
olu
bil
ity,
B
ind
ing
EC
50 "
free
", S
lice
VT
G L
OE
C
"fre
e"
[Lo
gM
ola
r]
Water Solubility Binding EC50 FHM LC50 FHM MATC Slice VTG LOEC
Common Reference Pointfor comparing among in vitro assays
and from in vitro to in vivo?
Couldn’t go from binding EC50 to in vivo Vtg,
But could go from in vitro Vtg to in vivo Vtg if you get on a comparable conc basis
Need to compare similar biological effect as well as get dosimetry on common scale