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Gabriel Guisado Biomedical Engineering, University of Rochester PI: Professor Christopher Hernandez, Mentor: Melanie Roberts Meinig School of Biomedical Engineering and Sibley School of Mechanical and Aerospace Engineering, Cornell University Bacterial Mechanics on a Chip

Bacterial)Mechanics onaChip15!At 60 kPa, bacteria can reach 300 nm constriction around 6 kPa pressure drop!Barely need pressure drop to travel up to 85-90% of taper !At 25 kPa, bacteria

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Page 1: Bacterial)Mechanics onaChip15!At 60 kPa, bacteria can reach 300 nm constriction around 6 kPa pressure drop!Barely need pressure drop to travel up to 85-90% of taper !At 25 kPa, bacteria

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Gabriel  GuisadoBiomedical  Engineering,  University  of  Rochester

PI:  Professor  Christopher  Hernandez,  Mentor:  Melanie  Roberts  

Meinig School  of  Biomedical  Engineering  and  Sibley  School  of  Mechanical  and  Aerospace  Engineering,  Cornell  University

Bacterial  Mechanics  on  a  Chip

Page 2: Bacterial)Mechanics onaChip15!At 60 kPa, bacteria can reach 300 nm constriction around 6 kPa pressure drop!Barely need pressure drop to travel up to 85-90% of taper !At 25 kPa, bacteria

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Osteomyelitis

Left:  MedicalXpress.comRight:  Kim,  SpineUniverse Case  Study,  Discitis  Osteomyelitis  63  Year  Old  Male

Page 3: Bacterial)Mechanics onaChip15!At 60 kPa, bacteria can reach 300 nm constriction around 6 kPa pressure drop!Barely need pressure drop to travel up to 85-90% of taper !At 25 kPa, bacteria

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MRSA Penetrating Bone

Nishitani et  al  2016

Page 4: Bacterial)Mechanics onaChip15!At 60 kPa, bacteria can reach 300 nm constriction around 6 kPa pressure drop!Barely need pressure drop to travel up to 85-90% of taper !At 25 kPa, bacteria

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Bacteria in a Tapered Channel:Extrusion Loading

1  µm  diameter

Page 5: Bacterial)Mechanics onaChip15!At 60 kPa, bacteria can reach 300 nm constriction around 6 kPa pressure drop!Barely need pressure drop to travel up to 85-90% of taper !At 25 kPa, bacteria

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Extrusion Loading ModelFwall

Fwall

Friction

Friction

Pupstream PdownstreamPcell

Page 6: Bacterial)Mechanics onaChip15!At 60 kPa, bacteria can reach 300 nm constriction around 6 kPa pressure drop!Barely need pressure drop to travel up to 85-90% of taper !At 25 kPa, bacteria

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DesignZoom

Page 7: Bacterial)Mechanics onaChip15!At 60 kPa, bacteria can reach 300 nm constriction around 6 kPa pressure drop!Barely need pressure drop to travel up to 85-90% of taper !At 25 kPa, bacteria

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Resistance to Fluid Flow in Bypass

Page 8: Bacterial)Mechanics onaChip15!At 60 kPa, bacteria can reach 300 nm constriction around 6 kPa pressure drop!Barely need pressure drop to travel up to 85-90% of taper !At 25 kPa, bacteria

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Sun et al Lab Chip 2014

Distance Traveled Relation to Pressure

Page 9: Bacterial)Mechanics onaChip15!At 60 kPa, bacteria can reach 300 nm constriction around 6 kPa pressure drop!Barely need pressure drop to travel up to 85-90% of taper !At 25 kPa, bacteria

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Device Fabrication

Deep  UV  Lithography Post  Exposure  Bake  &  Develop   ARC  Etch

Cr  Etch Silica  Etch Cr  Etch

Page 10: Bacterial)Mechanics onaChip15!At 60 kPa, bacteria can reach 300 nm constriction around 6 kPa pressure drop!Barely need pressure drop to travel up to 85-90% of taper !At 25 kPa, bacteria

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Post Exposure Tapers

Page 11: Bacterial)Mechanics onaChip15!At 60 kPa, bacteria can reach 300 nm constriction around 6 kPa pressure drop!Barely need pressure drop to travel up to 85-90% of taper !At 25 kPa, bacteria

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SEM Taper Characterization

Page 12: Bacterial)Mechanics onaChip15!At 60 kPa, bacteria can reach 300 nm constriction around 6 kPa pressure drop!Barely need pressure drop to travel up to 85-90% of taper !At 25 kPa, bacteria

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SEM Taper Characterization

Page 13: Bacterial)Mechanics onaChip15!At 60 kPa, bacteria can reach 300 nm constriction around 6 kPa pressure drop!Barely need pressure drop to travel up to 85-90% of taper !At 25 kPa, bacteria

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End Product

Page 14: Bacterial)Mechanics onaChip15!At 60 kPa, bacteria can reach 300 nm constriction around 6 kPa pressure drop!Barely need pressure drop to travel up to 85-90% of taper !At 25 kPa, bacteria

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Distance Traveled By Bacteria

60  kPa  Loaded  Device2525  kPa  Loaded  Device

Page 15: Bacterial)Mechanics onaChip15!At 60 kPa, bacteria can reach 300 nm constriction around 6 kPa pressure drop!Barely need pressure drop to travel up to 85-90% of taper !At 25 kPa, bacteria

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§ At 60 kPa, bacteria can reach 300 nm constriction around 6 kPa pressure drop§ Barely need pressure drop to travel up

to 85-90% of taper

§ At 25 kPa, bacteria can reach 300 nm constriction with pressure drop around 12 kPa§ Need at least 10 kPa to travel 85-90%

of taper length

Discussion

Page 16: Bacterial)Mechanics onaChip15!At 60 kPa, bacteria can reach 300 nm constriction around 6 kPa pressure drop!Barely need pressure drop to travel up to 85-90% of taper !At 25 kPa, bacteria

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§ Test bacteria known to cause bone infections (Staphylococcus aureus)

§ Long term: Determine what exactly allows bacteria to move through sub-micron channels

Future Work

Page 17: Bacterial)Mechanics onaChip15!At 60 kPa, bacteria can reach 300 nm constriction around 6 kPa pressure drop!Barely need pressure drop to travel up to 85-90% of taper !At 25 kPa, bacteria

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§ National Science Foundation

§ National Nanotechnology Coordinated Infrastructure

§ Cornell NanoScale Science & Technology Facility§ NSF grant no. ECCS-1542081

§ Project PI: Professor Christopher Hernandez

§ Mentor: Melanie Roberts

§ CNF REU Program Coordinators

§ CNF Staff

Acknowledgements