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PPMH AP Biology Syllabus 2012 – 2013
Mr. Abreu
AP Biology 2012 – 2013 Prinecrest Preparatory Middle-High
Instructor: Mr. Abreu
E-mail: [email protected]
COURSE DESCRIPTION In AP Biology, an emphasis is on students making connections between the big ideas
within the AP Biology Curriculum Framework. I teach the equivalent of an introductory college-
level biology course, and it is designed to prepare students for the AP Biology Exam.
My philosophy is to actively engage students in the process of science through class
assignments and discussions, which inform their laboratory experiences. For example, I increase
students’ critical thinking and problem-solving abilities by actively requiring them to anticipate
experimental set ups in group discussions, journal readings and hands-on labs. Emphasis is also
given to journal article readings in order to expose students to present day technologies and
procedures to familiarize them to limitations of testable hypotheses in order to develop better-
designed experimental investigations.
Lab techniques are learned through researching journal papers, hands-on labs which
make up at least 25% of instructional time. Labs emphasize development and testing of the
hypothesis, collection, analysis and presentation of data, as well as discussion of results to
discover unanswered questions about the particular topics addressed. A minimum of two labs in
each big idea will be conducted. Students are required to report on all laboratory investigations.
The student-directed and inquiry-based laboratory investigations used throughout the course
enable students to apply the seven science practices as defined in the Curriculum Framework.
THE EXAM The Biology Exam created by the College Board and Educational Testing Service will be
administered on May 13, 2012 (morning session). The AP Biology Exam consists of two
sections: multiple choice and free response. Both sections include questions that assess students’
understanding of the big ideas, enduring understandings, and essential knowledge and the ways
in which this understanding can be applied through the science practices. The exam is 3 hours
long and includes both a 90-minute multiple-choice section and a 90-minute free-response
section that begins with a mandatory 10-minute reading period. The multiple-choice section
accounts for half of the student’s exam grade, and the free-response section accounts for the
other half.
Section I, Part A, consists of 63 multiple-choice questions that represent the knowledge
and science practices outlined in the AP Biology Curriculum Framework that students should
understand and be able to apply. Part B includes 6 grid-in questions that require the integration
of science and mathematical skills. For the grid-in responses, students will need to calculate the
correct answer for each question and enter it in a grid in the grid-in section on their answer sheet,
as shown below.
In Section II, students should use the mandatory reading period to read and review the
questions and begin planning their responses. This section contains two types of free-response
questions (short and long), and the student will have a total of 80 minutes to complete all of the
questions. Due to the increased emphasis on quantitative skills and application of mathematical
methods in the questions on both sections, students will be allowed to use simple four-function
calculators (with square root) on the entire exam.
COURSE MATERIALS
PPMH AP Biology Syllabus 2012 – 2013
Mr. Abreu
1- Campbell, Neil and Reece, Jane B. 2005. AP Edition Biology, Seventh Edition, San
Francisco, CA: Pearson Benjamin Cummings.
2- Laboratory/classroom combination that includes the space, facilities, and equipment to safely
conduct hands-on inquiry-based investigations.
3- Released multiple choice tests and Free Response biology questions.
4- Selected websites and electronic media.
Supplies:
- Three-ringer binder with the
following tabs:
o Notes
o Current events/Articles
o FRQs
o Projects
- 1 composition notebook (you will
need more than 1 for the year)
- Paper
- Pencil
- Pen (dark blue or black)
- Pencils
- Graph paper
***Any other materials will be
requested by the teacher as needed.***
Lab fee: There is a mandatory lab fee for this course of $15.00
ATTENDANCE AND PARTICIPATION You are expected to attend and participate in all class sessions and assignments. You
should complete assigned reading and exercises before the date they are due, and you are
expected to participate fully in labs, fieldwork, and other exercises, whether they be individual or
team-based. See student handbook for school attendance policy.
CLASS RULES This course is equivalent to a college level course, and you are expected to act as an adult
at all times, whether in class, in the lab, or on a field trip. Disruption of class activities in any
way will not be tolerated and will result in disciplinary referrals as necessary. Per school policy,
cell phones must be kept turned off during school hours or they will be confiscated. Hall passes
are available to make essential trips to the office, media center, etc., but overuse of this privilege
will result in its termination. I expect all students to be responsible and courteous at all times.
MANDATORY LAB FEES:
Be advised that AP Biology students have a $15 Lab fee to pay the school. The monies
collected will be used to purchase science lab materials and to replace broken science
instruments. All lab fees are due during the first two-weeks of school. You may pay cash or
check paid out to PPMH.
ASSIGNMENTS
Classwork Assignments:
Class assignments will include daily home assignments, team projects and research,
reading and written work. Scientist professionals are expected to present their work products in a
PPMH AP Biology Syllabus 2012 – 2013
Mr. Abreu
timely, neat, accurate and well-organized fashion, and you are expected to do the same in this
course. Work must be submitted on the day it is due, NO LATE WORK WILL BE
ALLOWED.
Laboratories:
Laboratory and field investigations are designed to complement the lecture portion of the
course by providing opportunities to learn about biological procedures through firsthand
observations, to test concepts and principles which have been introduced in class, to explore
specific issues and problems in greater depth, and to gain an awareness of the importance of
confounding variables which exist in the real world. Investigations will be diverse and will
include indoor laboratory activities, outdoor activities, as well as field experience outside the
confines of the campus. The labs are designed to invite students to think critically, to observe
biological systems, to develop and conduct well designed experiments, to utilize appropriate
techniques and instrumentation, to analyze and interpret data, to present data orally and in the
form of statistical and graphical presentations, to apply concepts to the solution of the scientific
world, to form conclusions, and to propose further studies. All activities will be written in the lab
composition book. The teacher will collect the laboratory composition notebook periodically and
students will receive a laboratory grade (20%) toward their final grade for the nine weeks. Some
activities are expected to be performed outside of class time and students are expected to hand in
lab reports for evidence of completion.
Quizzes
Quizzes and mini-assessments will be given often and they will cover material from class,
reading and homework assignments. The assessments are to ensure that the student understands
the material covered in class and from the assignments. Some quizzes, the students will be
grouped in pairs and will work on the quizzes cooperatively; this peer learning strategy helps the
student gain greater understanding of concepts. Other quizzes will be AP format and students
will work independently. Quizzes will prepare you for the essay portion of the AP exam that you
must take on May 13, 2013. Be advised that the teacher reserves the right to give POP QUIZZES
at any point in the course.
Exams
Unit exams will be given after completion of each major topic. They will be announced
about three to five days ahead and will include all material covered in class as well as reading
and homework assignments. The test will range from multiple-choice to AP format essay
questions.
Projects
Students will be doing various projects during the year. The topic, criteria and due date will
be announced at least a month in advance. Project will allow students to further explore and
understand the concepts discussed in class.
Readings
Include textbook/ journal articles. Students are provided with guided reading questions
and are required to take notes.
PPMH AP Biology Syllabus 2012 – 2013
Mr. Abreu
NOTE: This is a college-level course and students are expected to engage in readings, activities,
and laboratory reports outside the classroom as instructed by the teacher.
GIZMOS, DISCOVERY EDUCATION, JASON PROJECT AND TECHNOLOGY
Technology is a MUST in a modern science classroom. Technology offers a variety of
resources that are crucial for students to understand AP Biology. Please understand that
technology will be used to further illustrate most of the concepts that will be presented this
school year. Students will need to create a free Gizmo account (I will walk you through it step-
by-step) the first week of school.
GRADING
Students will be evaluated through performance on unit exams (see pacing guide),
chapter quizzes on the reading assigned as homework, laboratory investigations and lab reports,
the AP Biology notebook, current events, group projects, and writing assignments.
Grade Components:
40 % Unit Tests
20 % Laboratories (Composition notebook)
& Class Projects
10% Classwork/ Check Points
25 % FRQ Quizzes (AP Style)
5% Homework
Grading Scale
A 90% – 100%
B 80% - 89%
C 70% - 79%
D 60% - 69%
F below 59%
NOTE ABOUT WEBSITE POSTINGS
NOTE: The teacher will update the website with current and relevant information about
classroom activities and assignments. Also, most of the work that needs to be done outside the
classroom will also be found on the school website. However, the most important type of
communication is NOT the website but the STUDENT-TEACHER and PARENT-TEACHER
communication. While technology is great, one-on-one communication is the key to a successful
teacher-parent-student relationship. Please feel free to contact me at any time for any questions
regarding assignments and classroom activities.
BIOLOGY ACTIVITIES TIMELINE
MOLCEULES, CELLS AND ENERGY: Big ideas 1, 2, 3, and 4
Topics Readings Activity/Laboratories Assessments
A.MOLECULES:
Big idea 4
Polarity of water
and its importance
to biological
systems.
Chemistry of Life:
Chapters 2 – 5
(textbook).
Guided reading.
Power-point notes.
Using kits to build
macro–molecule
models.
Exercises: protein
folding.
Student generated
concept maps.
Reading quizzes.
Unit test with free
response practice.
PPMH AP Biology Syllabus 2012 – 2013
Mr. Abreu
Carbon’s role in the
molecular diversity
of life.
Monomers,
polymers, and
reactions involved
in building and
breaking them down
considering
polar/nonpolar
interactions.
Various levels of
structures in protein
and carbohydrates.
Enzyme structure as
a special protein.
Cohesion, adhesion,
Specific heat of
water and its
importance to
biological systems.
Acids, bases, and
buffers.
Identifying macro-
molecules in our
foods.
Supplements &
Add-ons:
Cohesion/ adhesion
in nature.
Various
macromolecules in
our foods.
Cycling of chemical
elements in
Portion of Chapter
55.
Acid/base/buffer lab
activity.
Adhesion/ cohesion
lab.
Students will do
variations by adding
different macro-
molecules to solution
to see the effects of
adhesion.
Given the specific
heat equation, in
groups, students will
come up with a way
to determine
specific heat of
water.
Research exploring
how animals use the
properties of water
for survival.
Students will make
posters of the
different element
cycles, including
relative amounts of
transfer.
Written lab reports.
Students compose
chart comparing
structural
differences and how
indicators
physically work.
Student generated
short Power-points
on macro-molecules
and nutrition.
PPMH AP Biology Syllabus 2012 – 2013
Mr. Abreu
ecosystem.
B. HISTORY OF
LIFE:
Big idea 1
Theories of how
macro-molecules
joined to support
origin of life was
RNA 1st genetic
material.
Age of earth.
Chapter 25
(textbook).
Guided reading.
Power-point notes.
Discussion of journal
article.
Concept maps.
Reflection on the
development and
reformulation of
scientific theories.
Model or cartoon
explaining the
theories of origin of
life.
C. CELLS:
(structure and
function).
Big idea 1 and 2.
Explain similarities,
differences and
evolutionary
Relationships
between prokaryotic
and eukaryotic cells.
Cell membrane
Structure and
function.
Cell communication
(signals, receptors,
and responses
hormones).
Methods of
transport across
membranes.
Chapters 6,7, and
11 (textbook).
Outline notes.
Guided reading.
Power-point notes.
Posters (models)
comparing structures
of cells from 3
different cell types,
from 3 different
kingdoms.
LAB: Normal vs.
Plasmolyzed
Cells using Plant
cells.
LAB: Osmosis and
diffusion pre-labs,
labs, and post-lab.
Poster Presentations
comparing 3
feedback
mechanisms.
Inquiry lab:
Diffusion and
Osmosis
LAB: Microscope
techniques for
observing and
measuring different
types of cells.
Student generated
concept maps.
Reading quizzes.
Poster comparing
structures of cells
from 3 different
kingdoms.
Unit test with Free
Response practice.
Written lab reports.
Formal Lab report
for Inquiry lab on
Diffusion and
Osmosis.
Microscope
drawings and
calculation.
Analyze and discuss
chart comparing
different types of
cells
and their functions
in the human body.
Discussion of the
endosymbiont
PPMH AP Biology Syllabus 2012 – 2013
Mr. Abreu
hypotheses of the
evolution of
eukaryotic cells.
D. IMMUNITY:
Big idea 2 & 3
Innate vs. Acquired
response.
Humoral responses
in B cells vs. T
cells.
Chapter 43
(textbook).
Journal articles
about the anatomy
and physiology of
the human body.
Power-point notes.
Discuss journal
articles about
anatomy and
physiology of the
human body.
Student generated
concept maps.
E. CELL ENERGY:
ATP structure &
Function.
Redox reactions in
relation to cellular
respiration.
Enzyme catalysis
Activation energy
and specificity.
Cellular respiration
glycolysis, citric
acid cycle, electron
transport
chain, and
chemiosmosis.
Mitochondria form
and function.
Photosynthesis
mechanisms; light/
dark.
Compare/contrast to
respiration.
Alternative
mechanisms.
Understanding light
Chapters 8, 9, and
10 (textbook).
Outline notes.
Guided reading.
Power-point notes.
Investigative lab
#13: Enzyme
activity.
Investigative Lab:
Enzymes: Factors
affecting the rate of
activity.
Investigative Lab #6:
Cellular Respiration.
Investigative Lab #5:
Photosynthesis.
Internet activity
comparing different
wavelengths of light
in relation to
photosynthesis.
Student generated
concept maps.
Reading quizzes.
Unit test with free
response practice.
Presentation of
students’ group lab.
results to class.
Presentations of lab
data and results.
Lab report and
analysis.
Students’ chart
comparing sizes of
cellular parts and
larger items to
evaluate range of
metric distance
measurements down
to the nano scale.
PPMH AP Biology Syllabus 2012 – 2013
Mr. Abreu
energy and the nano
scale (the size of
small things inside
cells).
HEREDITY, GENETICS & EVOLUTION: Big ideas 1 and 3
Topics Readings Activity/Laboratories Assessments
A. MOLECULAR
BASIS OF
INHERITANCE:
DNA structure and
Replication.
RNA structure.
Protein Synthesis
transcription and
translation.
Mutations – basis
for natural selection.
Chapters 16 and 17
(textbook).
Journal Article:
Watson and
Crick’s original
paper from 1953.
DNA extraction.
Comparing DNA and
protein sequences
from an internet
based computer
database in
discussing
evolutionary
implications of
mutations.
Student generated
concept maps.
Reading quizzes.
Journal article
discussions.
Unit test with free
response practice.
B. MITOSIS AND
MEOSIS:
Cell Cycle
Mechanism and
control.
Chromosomes.
Sexual vs. asexual
reproduction and
evolutionary
advantages.
Stages of meiosis.
Genetic variation in
offspring,
mechanisms and
impact on evolution.
Investigating
Chapters 12 and 13
(textbook).
Investigative Lab #7:
Mitosis and Meiosis.
Karyotyping
exercise
(take home).
Student generated
concept maps.
Reading quizzes.
Unit test with free
response practice.
Investigative
laboratory
analysis.
Karyotyping results.
PPMH AP Biology Syllabus 2012 – 2013
Mr. Abreu
genetics:
environmental
influences.
C. MENDELIAN
GENETICS
MENDEL’S
LAWS:
Patterns of
inheritance.
Predicting genetic
outcomes.
Genetic counseling.
Gene linkage and
mapping.
Mutations revisited.
Chapters 14 and 15
(textbook).
Scientific American
Article.
Mini-lab activity:
Looking at corn
crosses and
analyzing results.
Student generated
concept maps.
Reading quizzes.
Journal article
discussions.
Unit test with free
response practice.
D. MOLECULAR
GENETICS:
Regulation of gene
expression.
Viruses
Gene expression in
bacteria.
Biotechnology.
DNA Technology,
Recombinant DNA,
PCR, Gel
electrophoresis.
Applications of
DNA technology.
Use of
bioinformatics to
analyze genomes.
Comparing and
Chapters 18 – 21
(textbook).
Journal Article
Reading.
Article by Kary
Mullis on PCR.
Virtual-lab: DNA
Electrophoresis.
Investigative lab #9:
Biotechnology I and
Biotechnology II.
Bacterial
Transformation and
Restriction Enzyme
Analysis of DNA.
Student generated
concept maps.
Reading quizzes.
Journal article
discussions.
Unit test with free
response practice.
Analysis and group
presentation of
Investigative lab.
PPMH AP Biology Syllabus 2012 – 2013
Mr. Abreu
discussing genomic
sequences in
relation to
evolution.
E.
EVOLUTIONARY
BIOLOGY:
Darwin’s
explorations and
theory of descent
with modification
and natural
selection.
Galapagos Islands
overview.
Evidence for
evolution
(molecular analyses
and morphological
analyses.
Phylogeny and
systematics.
Evolution of
populations.
Hardy-Weinberg
Law.
Chapters 22–25
(textbook).
Journal Article
Reading.
Beak of the Finch
by
Jonathan Weiner.
Activity: Genetics
survey.
Project analyzing
traits of those around
us.
Lab Investigation #2:
Mathematical
Modeling:
Hardy-Weinberg.
Activity: Students
create
Geologic timeline.
Activity: Hands on
fossil analysis.
Student generated
concept maps.
Reading quizzes.
Unit test with free
response practice.
ORGANISMS & POPULATIONS: Big ideas 1, 3 & 4
Topics Readings Activity/Laboratories Assessments
A. BIOLOGICAL
DIVERSITY AND
MICROBIOLOGY:
Early life on earth
Evolution of
prokaryotes and
eukaryotes.
Chapters 25, 26, 27,
29, and 30
(textbook).
Students will read an
article involving
genetic
recombination using
prokaryotes and
present to class
(students will have
different articles).
Investigative LAB #
Article presentation
to class.
Student generated
concept maps.
Unit test with free
response practice.
PPMH AP Biology Syllabus 2012 – 2013
Mr. Abreu
3:
Analyzing Genes.
B. PLANTS AND
THEIR
DIVERSITY:
How plants
colonized land.
Evolution of seed
plants.
Structure, growth
and development.
Plants responses to
internal and external
stimuli.
Plant nutrition.
Angiosperm
reproduction.
Chapters 35 – 39
(textbook).
Investigative LAB #
11:
Transpiration.
LAB: Flower
dissection.
LAB: Students
conduct a long-term
lab investigation
plant growth from
seeds under various
conditions in our
garden.
Practical Test
specimen
identification and
placing on
phylogenetic tree.
Student generated
concept maps.
Investigative labs.
analysis.
Formal lab. report
for students’ own
plant lab.
C. ANIMAL
DIVERSITY:
Characteristics
(body plans and
systems) of
invertebrates as you
go up the
phylogenetic tree.
Basic anatomy
principles.
Analysis of
structure and
function of body
systems.
Digestive,
Circulatory,
Respiratory,
Excretory,
Endocrine, Nervous,
Chapters 32– 34 and
40–49.
Survey of animal
phyla in concept
map/chart form
generated by
students.
Human Biology:
Circulation and
Blood Pressure
(article).
Lab: Dissection: cat.
Student generated
concept maps (one
for each system and
animal diversity
examination).
Reading quizzes.
Unit test with free
response practice.
Practical quiz
observing various
specimens and
classifying them
using students’ own
made chart of
animal phyla.
PPMH AP Biology Syllabus 2012 – 2013
Mr. Abreu
Muscular Systems.
D. ECOLOGY:
Ecological
interactions- biotic
vs. abiotic.
Behavioral ecology-
natural selection
involvement.
Population
dynamics- growth
and its regulations.
Communities and
Ecosystems energy
levels and flows,
cycles, symbiosis
and impact on
evolution.
Human influences-
positive and
negative.
Chapters 50– 55
(textbook).
Investigative LAB
#12:
Fruit fly behavior.
Animal Behavior:
Taxis,
Kinesis, and
Agonistic
Behavior.
LAB: Dissolved
Oxygen and Aquatic
Primary
Productivity.
Activity: “My
footprint.”
Student generated
concept maps.
Reading quizzes.
Unit test with free
response practice.
Investigative Lab
#11 formal lab
report.
Presentation:
students present lab
results to class with
ways to improve
water quality of
their local river.
Personal project:
students complete
“My Footprint”
online and write a
paper discussing
their individual
impact on
Earth.
PPMH AP Biology Syllabus 2012 – 2013
Mr. Abreu
Parents and Students,
Please sign and return to Mr. Abreu by Friday, August 27, 2012. It is a required document for
student files.
Thank you,
Mr. Abreu
We the parent/guardian(s) and the student, have fully read, understood, and agree to abide by
these expectations.
Science Period ______
_____________________ _________________ ____________
Print Student name Student’s signature Date
_______________________
Student e-mail address
_______________________ _______________________ ____________
Print Parent/Guardian name Parent/Guardian’s signature Date
Teacher Use Only: Received / / Lab Fee Paid yes no Teacher Initials