1
Results (1) Characterization of Butyrophilin 3A Expression Across Multiple Tumor Types to Support Target Patient Population Selection in the EVICTION Study with ICT01, an Anti-BTN3A Monoclonal Antibody that Selectively Activates Vγ9Vδ2 T Cells. Clément Ghigo*, Aude de Gassard*, Patrick Brune*, Caroline Imbert # , Clemence Demerle # , Marie Sarah Rouviere # , René Hoet*, Daniel Olive # , Emmanuel Valentin* * : ImCheck Therapeutics, 31 Joseph Aiguier, 13009 Marseille, France; # : Centre de Recherche en Cancérologie de Marseille (CRCM), INSERM U1068, 13009 Marseille, France Background: Vγ9Vδ2 T are key players of innate and adaptive anti-tumor immunity (1). Butyrophilin 3A1 (BTN3A1) plays a key role in their activation through sensing of intracellular phosphoantigens by its cytoplasmic domain (2)(6). Butyrophillin 3A (BTN3A) three isoforms (3A1/3A2/3A3) are widely expressed on a variety of tumors (4). Vγ9Vδ2 T cell infiltration into tumor tissues is associated with a positive prognosis across multiple cancers (3), making BTN3A an interesting target for enhancing Vγ9Vδ2 anti-tumor activity. ImCheck Therapeutics is developing ICT01, an anti-BTN3A mAb that specifically activates Vγ9Vδ2 T cells. ICT01 is currently in an international, multi-center Phase 1/2a clinical trial (NCT 04243499, EVICTION Study). The level of BTN3A expression required for a clinical response to ICT01 is not known. Therefore, we developed novel immunohistochemistry (IHC) methods to enable a precision-medicine based approach to target population selection for dose escalation and potentially guide patient selection in the expansion cohorts of the ongoing EVICTION study. Methods: A panBTN3A IHC staining that recognizes the three isoforms was developed on Fresh frozen (FF) tissues, while BTN3A2 and BTN3A3 specific stainings were developed on formalin-fixed paraffin embedded (FFPE) tissues. BTN3A1-specific staining is still under development. Transfected knock-out/knock-in cell lines and positive tissues were used to assess antibody specificity. BTN3A expression was then analyzed on both normal and associated tumor tissue using tissue microarrays (TMA) and selected frozen blocks from tumor biopsies. FACS analyses were also performed on dissociated lung and pancreatic cancer biopsies to determine BTN3A (3 isoforms) membrane expression on tumor-infiltrating immune cells and cancer/stromal cells. 1) Three anti-BTN3A antibodies are validated for IHC stainings 6) Conclusions and Clinical Perspectives BTN3A1-transfected BTN3A2-transfected BTN3A3-transfected BTN3A1/3A2/3A3 triple knock-out A- #20.1 recognizes all three BTN3A isoforms, as confirmed by staining of the transfected-triple knock-out cell lines below. B- #TA500730 strongly recognizes BTN3A2 and displays weak staining on BTN3A3. C- #HPA007904 recognizes only BTN3A3. Antibodies specificities were confirmed by intracellular Flow Cytometry on the same Knock-out/Knock-in HEK cell lines described above. No staining was observed on BTN3A1/3A2/3A3 triple knockouts (not shown). Mouse #20.1 stains all three isoforms. anti-3A2 (#TA500730) stains mostly BTN3A2-transfected cells, with weak staining observed in BTN3A3-transfected cells. anti-BTN3A3 (#HPA007904) stains only BTN3A3 transfected cells Colon adenocarcinoma melanoma lung squamous cell carcinoma pan-BTN3A cell surface density was determined by FACS staining with the mouse #20.1 mAb on single cells suspension obtained from fresh tumor biopsies. Infiltrating immune cell populations were identifed using specific FACS panel. BTN3A membrane expression was almost undetectable on stromal cells (defined as CD45-negative) in pancreatic cancer biopsies and low in lung cancer biopsies. BTN3A membrane expression was strong on all CD45+ cells. B30.2 C V C V C V B30.2 A1 A2 A3 m20.1 #TA500730 #HPA007904 Immunohistochemistry was performed on the Benchmark XT automated platform (Ventana-Roche). Fresh Frozen samples sections were fixed and then stained with anti-BTN3A mAb (clone #20.1). FFPE samples sections were pretreated and then incubated with anti-BTN3A2 (TA500730, Thermo) or anti- BTN3A3 (HPA007904, Sigma) antibodies. Antibodies epitopes, when known, are depicted on the scheme (left). Specificity was demonstrated by staining a BTN3A1/BTN3A2/BTN3A3 triple knock-out HEK cell line, transfected for each respective isoform (below). Melanoma (n=2), bladder cancer (n=3), pancreas cancer (n=3), ovarian cancer (n=3) and breast cancer(n=3) frozen blocks were screened for panBTN3A staining (clone #20.1, Benchmark XT, frozen tissues). Normal and malignant Tissue microarrays (TMAs, Bladder cancer BL631, Head and neck HN241b, Colon and rectum carcinoma CO1002b, Lung cancer LC10010c, Skin malignant melanoma ME482a, Pancreas cancer PA241d, Prostate cancer PR243c, Breast cancer BRM961a and normal tissues arrays) were screened for BTN3A2 and BTN3A3 stainings (#TA500730 and #HPA007904, Benchmark XT, FFPE tissues). Tissues staining specificity was validated by a trained pathologist and panBTN3A, BTN3A2 and BTN3A3 staining intensity was assessed by a semi-quantitative method (Histology Score, Arbitrary Unit, 0-300, combination of staining intensity with the % of positive cells, in tumor parenchyma, stroma and mononuclear cells, for both cytoplasmic and membranous signals). 3) In solid tumors, BTN3A is upregulated in malignant tissue when compared to normal tissue, with inter-patient heterogeneity 5) BTN3A tumoral expression in first patients of EVICTION clinical trial 2) Further validation of anti-BTN3A antibodies specificity by Flow Cytometry and IHC staining on human tonsil 4) In pancreatic and lung cancer, BTN3A is detected at the membrane of immune cells, with lower level on stromal cells High Medium Low Negative Pan-BTN3A (Histo-score*, tumoral vs normal) BTN3A2 (Histo-score*, tumoral vs normal) BTN3A3 (Histo-score*, tumoral vs normal) % of tested samples % of tested samples % of tested samples ICT01 MOA Binds to all three BTN3A isoforms triggering: 1) γ9δ2 T-cell activation and trafficking from the circulation within 30 minutes, 2) Production of IFNγ and TNFα leading to immune cell activation, 3) Proliferation in the presence of cytokines, and 4) Cytotoxic attack of malignant cells that express a 2 nd necessary signal. BTN3A1-transfected BTN3A2-transfected BTN3A3-transfected BTN3A1/3A2/3A3 triple knock-out BTN3A1-transfected BTN3A2-transfected BTN3A3-transfected BTN3A1/3A2/3A3 triple knock-out Antibodies specificities were further evaluated by comparing staining pattern obtained on human tonsil tissue. First, human tonsil tissue was dissociated and FACS-stained with the three anti- BTN3A antibodies and a panel allowing the identification of four B cells subpopulation: naive B cells, germinal center B cells, plasmablasts and memory B cells. As depicted (left, top), mouse #20.1 mAb stained mostly naive B cells and plasmablast, the anti-BTN3A2 mAb stained germinal centers B cells and plasmablast (germinal centers) and the anti-BTN3A3 stained mostly naive B cells and plasmablasts. Interestingly (left, bottom), a coherent staining pattern was obtained by IHC staining human tonsil, with #20.1 and anti-BTN3A3 staining mostly interfollicular areas and anti-BTN3A2 staining mostly germinal centers B cells and plasmablast. EVICTION ((NCT 04243499) is a first–in-human, Phase I/IIa clinical trial evaluating ICT01, a first-in-class γ9δ2 T cell-activating monoclonal antibody (mAb) targeting the extracellular domain of Butyrophilin 3A (BTN3A) as monotherapy and in combination with an immune checkpoint inhibitor in patients with advanced, relapsed/refractory cancer, including both solid and hematologic tumors. In order to evaluate the potential of BTN3A expression level as a biomarker for selecting patients that will benefit the most from ICT01 therapy, those IHC methods were used to assess BTN3A expression in pre- and post-treatment tumor biopsies from the first six patients enrolled in cohort 1 in the dose escalation phase. Histo-scores (left) and panBTN3A representative IHC images (bottom panel) obtained in pre-treatment tumoral biopsies are presented. Among those six patients, BTN3A expression levels are heterogenous. A higher BTN3A expression is observed in the cytoplasm in comparison to membrane expression. BTN3A2 expression seems to be up-regulated in the cytoplasm in parenchymal cells in comparison to pan-BTN3A and BTN3A3 expression, while no significant difference is observed in stromal cells. Those preliminary results will be confirmed in other patients and next cohorts. 1. Malignant cells tended to overexpress BTN3A, as compared to healthy tissue, although there was intra-patient variability. 2. Also, a significant percentage of Immune cells isolated from lung and pancreatic tumor biopsies expressed BTN3A. 3. These validated IHC methods are currently being used in the EVICTION trial (NCT 04243499) in order to characterize specific cancers and identify patients that respond favorably to ICT01 therapy, a γ9δ2T cell-activating monoclonal antibody (mAb) targeting the extracellular domain of all 3 isoforms of BTN3A. 4. Results from the first 6 patients with solid tumors treated in Cohort 1 revealed higher cytoplasmic expression of BTN3A. Also, a higher cytoplasmic expression of BTN3A2 in parenchymal cells is observed in comparison to BTN3A3 or pan-BTN3A suggesting differential gene regulation mechanisms for the different BTN3A isoforms. 5. Additional data from EVICTION patients with solid tumors and hematologic malignancies are needed to confirm these preliminary results and help in understanding the expression of BTN3A, and identifying the right patients for treatment with and response to ICT01. Patient #1 (CRC) pre-treatment panBTN3A (20.1 staining) Patient #2 (CRC) pre-treatment panBTN3A (20.1 staining) Patient #3 (melanoma) pre-treatment panBTN3A (20.1 staining) Patient #4 (ovarian) pre-treatment panBTN3A (20.1 staining) Patient #5 (pancreas) pre-treatment panBTN3A (20.1 staining) Pancreatic cancer (n=6) Lung cancer (n=8) Juan-Luis Blazquez, Audrey Benyamine, Christine Pasero, and Daniel Olive. New Insights into the Regulation of γδ T Cells by BTN3A and Other BTN/BTNL in Tumor Immunity. Front Immunol. 2018; 9: 1601. Gentles AJ, Newman AM, Long Liu C, et al. The prognostic landscape of genes and infiltrating immune cells across human cancers. Nat Med. 2015 Aug;21(8):938-945. Compte E, Pontarotti P, Collette Y, Lopez M, Olive D. Frontline: characterization of BT3 molecules belonging to the B7 family expressed on immune cells. Eur J Immunol. 2004; 34:2089–99.. Eberl M. Antigen recognition by human cd T cells: one step closer to knowing. Immunology & Cell Biology 2020; 98: 351–354 mIgG1 #20.1 (10µg/ml) #TA500730 (1µg/ml) #HPA007904 (1µg/ml) Anti-Rabbit -APC Abstract ID: 68

Abstract ID: 68 Characterization of Butyrophilin 3A Expression … · 2020. 11. 5. · (Histology Score, Arbitrary Unit, 0-300, combination of staining intensity with the % of positive

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Page 1: Abstract ID: 68 Characterization of Butyrophilin 3A Expression … · 2020. 11. 5. · (Histology Score, Arbitrary Unit, 0-300, combination of staining intensity with the % of positive

Results (1)

Characterization of Butyrophilin 3A Expression Across Multiple Tumor Types to Support Target Patient Population Selection in the EVICTION Study with ICT01, an Anti-BTN3A Monoclonal Antibody that Selectively Activates Vγ9Vδ2 T Cells.

Clément Ghigo*, Aude de Gassard*, Patrick Brune*, Caroline Imbert#, Clemence Demerle#, Marie Sarah Rouviere#, René Hoet*, Daniel Olive#, Emmanuel Valentin*

* : ImCheck Therapeutics, 31 Joseph Aiguier, 13009 Marseille, France; # : Centre de Recherche en Cancérologie de Marseille (CRCM), INSERM U1068, 13009 Marseille, France

Background: Vγ9Vδ2 T are key players of innate and adaptive anti-tumor immunity (1). Butyrophilin 3A1 (BTN3A1) plays a key role in their activation through sensing of intracellular phosphoantigens by its cytoplasmic domain (2)(6). Butyrophillin 3A (BTN3A) threeisoforms (3A1/3A2/3A3) are widely expressed on a variety of tumors (4). Vγ9Vδ2 T cell infiltration into tumor tissues is associated with a positive prognosis across multiple cancers (3), making BTN3A an interesting target for enhancing Vγ9Vδ2 anti-tumor activity.ImCheck Therapeutics is developing ICT01, an anti-BTN3A mAb that specifically activates Vγ9Vδ2 T cells. ICT01 is currently in an international, multi-center Phase 1/2a clinical trial (NCT04243499, EVICTION Study). The level of BTN3A expression required for a clinicalresponse to ICT01 is not known. Therefore, we developed novel immunohistochemistry (IHC) methods to enable a precision-medicine based approach to target population selection for dose escalation and potentially guide patient selection in the expansion cohorts ofthe ongoing EVICTION study.

Methods: A panBTN3A IHC staining that recognizes the three isoforms was developed on Fresh frozen (FF) tissues, while BTN3A2 and BTN3A3 specific stainings were developed on formalin-fixed paraffin embedded (FFPE) tissues. BTN3A1-specific staining is still underdevelopment. Transfected knock-out/knock-in cell lines and positive tissues were used to assess antibody specificity. BTN3A expression was then analyzed on both normal and associated tumor tissue using tissue microarrays (TMA) and selected frozen blocks from tumorbiopsies. FACS analyses were also performed on dissociated lung and pancreatic cancer biopsies to determine BTN3A (3 isoforms) membrane expression on tumor-infiltrating immune cells and cancer/stromal cells.

1) Three anti-BTN3A antibodies are validated for IHC stainings

6) Conclusions and Clinical Perspectives

BTN3A1-transfected

BTN3A2-transfected BTN3A3-transfected

BTN3A1/3A2/3A3 triple knock-out

A- #20.1 recognizes all three BTN3A isoforms, asconfirmed by staining of the transfected-tripleknock-out cell lines below.

B- #TA500730 strongly recognizes BTN3A2 anddisplays weak staining on BTN3A3.

C- #HPA007904 recognizes only BTN3A3.

Antibodies specificities were confirmed by intracellular Flow Cytometry on thesame Knock-out/Knock-in HEK cell lines described above. No staining wasobserved on BTN3A1/3A2/3A3 triple knockouts (not shown). Mouse #20.1 stainsall three isoforms. anti-3A2 (#TA500730) stains mostly BTN3A2-transfected cells,with weak staining observed in BTN3A3-transfected cells. anti-BTN3A3(#HPA007904) stains only BTN3A3 transfected cells

Colon adenocarcinomamelanoma lung squamous cell carcinoma

pan-BTN3A cell surface density was determined by FACS staining with the mouse #20.1 mAb on single cells suspension obtained fromfresh tumor biopsies. Infiltrating immune cell populations were identifed using specific FACS panel. BTN3A membrane expression was almost undetectable on stromal cells (defined as CD45-negative) in pancreatic cancer biopsies and low in lung cancer biopsies. BTN3A membrane expression was strong on all CD45+ cells.

B30.2

C

V

C

V

C

V

B30.2

A1 A2 A3m20.1

#TA500730#HPA007904

Immunohistochemistry was performed on the Benchmark XT automated platform (Ventana-Roche).Fresh Frozen samples sections were fixed and then stained with anti-BTN3A mAb (clone #20.1). FFPEsamples sections were pretreated and then incubated with anti-BTN3A2 (TA500730, Thermo) or anti-BTN3A3 (HPA007904, Sigma) antibodies.Antibodies epitopes, when known, are depicted on the scheme (left). Specificity was demonstrated bystaining a BTN3A1/BTN3A2/BTN3A3 triple knock-out HEK cell line, transfected for each respectiveisoform (below).

Melanoma (n=2), bladder cancer (n=3),pancreas cancer (n=3), ovarian cancer (n=3)and breast cancer(n=3) frozen blocks werescreened for panBTN3A staining (clone#20.1, Benchmark XT, frozen tissues).Normal and malignant Tissue microarrays(TMAs, Bladder cancer BL631, Head andneck HN241b, Colon and rectum carcinomaCO1002b, Lung cancer LC10010c, Skinmalignant melanoma ME482a, Pancreascancer PA241d, Prostate cancer PR243c,Breast cancer BRM961a and normal tissuesarrays) were screened for BTN3A2 andBTN3A3 stainings (#TA500730 and#HPA007904, Benchmark XT, FFPE tissues).Tissues staining specificity was validated bya trained pathologist and panBTN3A,BTN3A2 and BTN3A3 staining intensity wasassessed by a semi-quantitative method(Histology Score, Arbitrary Unit, 0-300,combination of staining intensity with the %of positive cells, in tumor parenchyma,stroma and mononuclear cells, for bothcytoplasmic and membranous signals).

3) In solid tumors, BTN3A is upregulated in malignant tissue when compared to normal tissue, with inter-patient heterogeneity 5) BTN3A tumoral expression in first patients of EVICTION clinical trial

2) Further validation of anti-BTN3A antibodies specificity by Flow Cytometry and IHC staining on human tonsil

4) In pancreatic and lung cancer, BTN3A is detected at the membrane of immune cells, with lower level on stromal cells

HighMediumLowNegative

Pan-BTN3A (Histo-score*, tumoral vs normal)

BTN3A2 (Histo-score*, tumoral vs normal)

BTN3A3 (Histo-score*, tumoral vs normal)

% o

f tes

ted

sam

ples

% o

f tes

ted

sam

ples

% o

f tes

ted

sam

ples

ICT01 MOABinds to all three BTN3A isoforms triggering: 1) γ9δ2 T-cell activationand trafficking from the circulation within 30 minutes, 2) Production of IFNγ and TNFαleading to immune cell activation, 3) Proliferation in the presence of cytokines, and 4) Cytotoxic attack of malignant cells that express a 2nd necessary signal.

BTN3A1-transfected

BTN3A2-transfected BTN3A3-transfected

BTN3A1/3A2/3A3 triple knock-out

BTN3A1-transfected

BTN3A2-transfected BTN3A3-transfected

BTN3A1/3A2/3A3 triple knock-out

Antibodies specificities were further evaluated by comparing staining patternobtained on human tonsil tissue.First, human tonsil tissue was dissociated and FACS-stained with the three anti-BTN3A antibodies and a panel allowing the identification of four B cellssubpopulation: naive B cells, germinal center B cells, plasmablasts and memoryB cells.As depicted (left, top), mouse #20.1 mAb stained mostly naive B cells andplasmablast, the anti-BTN3A2 mAb stained germinal centers B cells andplasmablast (germinal centers) and the anti-BTN3A3 stained mostly naive B cellsand plasmablasts.Interestingly (left, bottom), a coherent staining pattern was obtained by IHCstaining human tonsil, with #20.1 and anti-BTN3A3 staining mostlyinterfollicular areas and anti-BTN3A2 staining mostly germinal centers B cellsand plasmablast.

EVICTION ((NCT04243499) is a first–in-human, Phase I/IIa clinical trialevaluating ICT01, a first-in-class γ9δ2 T cell-activating monoclonalantibody (mAb) targeting the extracellular domain of Butyrophilin 3A(BTN3A) as monotherapy and in combination with an immunecheckpoint inhibitor in patients with advanced, relapsed/refractorycancer, including both solid and hematologic tumors.In order to evaluate the potential of BTN3A expression level as abiomarker for selecting patients that will benefit the most from ICT01therapy, those IHC methods were used to assess BTN3A expression inpre- and post-treatment tumor biopsies from the first six patientsenrolled in cohort 1 in the dose escalation phase.Histo-scores (left) and panBTN3A representative IHC images (bottompanel) obtained in pre-treatment tumoral biopsies are presented.Among those six patients, BTN3A expression levels are heterogenous. Ahigher BTN3A expression is observed in the cytoplasm in comparison tomembrane expression. BTN3A2 expression seems to be up-regulated inthe cytoplasm in parenchymal cells in comparison to pan-BTN3A andBTN3A3 expression, while no significant difference is observed instromal cells. Those preliminary results will be confirmed in otherpatients and next cohorts.

1. Malignant cells tended to overexpress BTN3A, as compared to healthy tissue, although there wasintra-patient variability.

2. Also, a significant percentage of Immune cells isolated from lung and pancreatic tumor biopsiesexpressed BTN3A.

3. These validated IHC methods are currently being used in the EVICTION trial (NCT04243499) inorder to characterize specific cancers and identify patients that respond favorably to ICT01 therapy,a γ9δ2T cell-activating monoclonal antibody (mAb) targeting the extracellular domain of all 3isoforms of BTN3A.

4. Results from the first 6 patients with solid tumors treated in Cohort 1 revealed higher cytoplasmicexpression of BTN3A. Also, a higher cytoplasmic expression of BTN3A2 in parenchymal cells isobserved in comparison to BTN3A3 or pan-BTN3A suggesting differential gene regulationmechanisms for the different BTN3A isoforms.

5. Additional data from EVICTION patients with solid tumors and hematologic malignancies areneeded to confirm these preliminary results and help in understanding the expression of BTN3A,and identifying the right patients for treatment with and response to ICT01.

Patient #1 (CRC) pre-treatmentpanBTN3A (20.1 staining)

Patient #2 (CRC) pre-treatmentpanBTN3A (20.1 staining)

Patient #3 (melanoma) pre-treatmentpanBTN3A (20.1 staining)

Patient #4 (ovarian) pre-treatmentpanBTN3A (20.1 staining)

Patient #5 (pancreas) pre-treatmentpanBTN3A (20.1 staining)

Pancreatic cancer (n=6) Lung cancer (n=8)

• Juan-Luis Blazquez, Audrey Benyamine, Christine Pasero, and Daniel Olive. New Insights into the Regulation of γδ T Cells by BTN3A and Other BTN/BTNL in Tumor Immunity. Front Immunol. 2018; 9: 1601.• Gentles AJ, Newman AM, Long Liu C, et al. The prognostic landscape of genes and infiltrating immune cells across human cancers. Nat Med. 2015 Aug;21(8):938-945.• Compte E, Pontarotti P, Collette Y, Lopez M, Olive D. Frontline: characterization of BT3 molecules belonging to the B7 family expressed on immune cells. Eur J Immunol. 2004; 34:2089–99.. • Eberl M. Antigen recognition by human cd T cells: one step closer to knowing. Immunology & Cell Biology 2020; 98: 351–354

mIgG1

#20.1(10µg/ml)

#TA500730(1µg/ml)

#HPA007904(1µg/ml)

Anti-Rabbit-APC

Abstract ID: 68