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LIFE A cure for Lou Gehrig's disease is sought in tiny cells, big data MOST POPULAR State GOP astounds with multiple wins Elderly couple struck by OCTA bus in Santa Ana Clippers are crushed by Warriors Santa Ana 'ahead of the game' with pot law Authorities identify Rancho Santa Margarita man who jumped to his death from bridge / STAFF WRITER BY JENNA CHANDLER Published: Nov. 4, 2014 Updated: Nov. 5, 2014 1:40 p.m. Before diving too deeply into this story on Lou Gehrig’s disease research, you should know about a technique that manipulates an adult’s blood or skin cell into behaving like an embryonic stem cell. Once reverted into that primitive state, this new cell can be directed to become any other type of cell in the human body. Funded by an $8 million federal grant awarded last month, UC Irvine researchers are leading a team of six institutions studying Lou Gehrig’s disease using stem cells generated through this reprogramming method. The cells are known as induced pluripotent stem, or iPS, cells. Researchers involved in the NeuroLINCS program said they might be key to learning why Lou Gehrig’s disease strikes patients who did not inherit the neurological condition, and aid in discovering new drug treatments for it. For the study, the iPS cells will be derived from the blood cells of 12 people with Lou Gehrig’s disease and turned into motor neurons, the nerve cells that control voluntary muscle movements. Before iPS cells, researchers’ options for studying nerve cells were limited to those taken from mice, or actual embryonic stem cells. “You’re not destroying any embryos, not destroying any fetuses, and the biggest advantage is the genetic material does not change. The DNA or whatever the patient KEVIN SULLIVAN, , STAFF PHOTOGRAPHER

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11/6/2014 A cure for Lou Gehrig's disease is sought in tiny cells, big data - The Orange County Register

http://www.ocregister.com/articles/cells-640798-disease-gehrig.html?page=1 1/5

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A cure for Lou Gehrig's disease is sought intiny cells, big data

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/ STAFF WRITERBY JENNA CHANDLER

Published: Nov. 4, 2014 Updated: Nov. 5, 20141:40 p.m.

Before diving too deeply into this story on Lou Gehrig’sdisease research, you should know about a techniquethat manipulates an adult’s blood or skin cell intobehaving like an embryonic stem cell.

Once reverted into that primitive state, this new cell canbe directed to become any other type of cell in thehuman body.

Funded by an $8 million federal grant awarded lastmonth, UC Irvine researchers are leading a team of six

institutions studying Lou Gehrig’s disease using stem cells generated through thisreprogramming method.

The cells are known as induced pluripotent stem, or iPS, cells. Researchers involved inthe NeuroLINCS program said they might be key to learning why Lou Gehrig’s diseasestrikes patients who did not inherit the neurological condition, and aid in discoveringnew drug treatments for it.

For the study, the iPS cells will be derived from the blood cells of 12 people with LouGehrig’s disease and turned into motor neurons, the nerve cells that control voluntarymuscle movements.

Before iPS cells, researchers’ options for studying nerve cells were limited to thosetaken from mice, or actual embryonic stem cells.

“You’re not destroying any embryos, not destroying any fetuses, and the biggestadvantage is the genetic material does not change. The DNA or whatever the patient

KEVIN SULLIVAN, , STAFFPHOTOGRAPHER

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11/6/2014 A cure for Lou Gehrig's disease is sought in tiny cells, big data - The Orange County Register

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harbors, a certain mutation, a problem with the DNA code, that is maintained when youconvert to iPS,” said Dhruv Sareen, a neurobiology researcher with Cedars-Sinai Boardof Governors Regenerative Medicine Institute.

Researchers will upload their information – and there will be a vast amount of it – into ashared database where analysts will look for commonalities to help doctors betterdiagnose and treat the disease. Along with UCI and Cedars-Sinai, participants includeresearchers from Johns Hopkins University, UC San Francisco, Massachusetts Instituteof Technology, and the Gladstone Institute of Neurological Disease,

Lou Gehrig’s disease, or amyotrophic lateral sclerosis, attacks motor neurons, causingthem to degenerate. It leaves the mind intact as it wilts muscles and freezes joints. Inthe grip of its most severe stage, patients can no longer speak, eat or breathe on theirown.

Sareen called it one of the more deadly neurological diseases, with most patients dyingwithin four to five years after diagnosis.

The woman heading up NeuroLINCS, Leslie Thompson, is renowned for her work withHuntington’s disease, another degenerative motor neuron condition. But unlike themajority of Lou Gehrig’s cases, the cause of Huntington’s is known: It is a geneticdefect.

A small number, 5 percent to 10 percent, of Lou Gehrig’s cases are inherited.

When studying motor neurons, Thompson and her team will look for “signatures,”characteristics that make them unique. They will expose the nerve cells to proteins,genes, chemicals and anything else with which they might come in contact in the brain,to see how those factors change them or their activity.

Cedars-Sinai’s regenerative medicine institute is generating the iPS cells for the project.It delivered versions derived from healthy skin cells last week for the control group, andis sending iPS cells from ALS patients this week.

“We want to be able to create in a dish the motor neurons that mirror an individualpatient’s disease so we can see how quickly or slowly degeneration occurs,” theinstitute’s director, Clive Svendsen, said. “We also want to be able to interact with thedisease model and see if we can slow it down in the dish. If so, theoretically, we shouldbe able to slow it down in the patient as well.”

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11/6/2014 A cure for Lou Gehrig's disease is sought in tiny cells, big data - The Orange County Register

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A cure for Lou Gehrig's disease is sought intiny cells, big data(Page 2 of 2)

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Published: Nov. 4, 2014 Updated: Nov. 5, 20141:40 p.m.

The grant from the National Institutes of Health will cover six years of research. Alongthe way, Thompson and her team will have to meet certain milestones. The first isbuilding infrastructure for the database and determining how to upload theinformation.

“We keep track of things in our own lab, but we’re not used to sharing it with others,”Thompson said. “We’ve had ways we’ve been sharing, through publications, and thereare some centralized databases and sources that are available – but not at this level.This is going to take a whole new type of technology to handle this type of data set, andcomputational analysis. It really is really innovative.”

Ryan Lim is a UCI graduate student working in Thompson’s lab. He said one nerve cellhas about 500 gigabytes of data, “and that’s just the tip of the iceberg.”

One gigabyte in a cell phone’s data plan is the equivalent of sending or receiving 50,000e-mails, streaming 33 hours of music, viewing 1,000 web pages and posting 2,800photos on Facebook, according to the consumers group Citizens Utility Board.

Svendsen said data-analysis teams will collaborate to create computer programs topull all the information together.

“Scientists often focus on very small things, such as a single signaling pathway in cellsor a single gene or protein that is involved in some way with disease development, butidentifying and correcting one component rarely leads to a cure,” he said. “This isespecially true in the brain because its networks are very complex."

Contact the writer: [email protected] and @jennakchandler on Twitter

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