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The slides for a talk given at Leicester University Genetics Department on 14 October 2009
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The Web as a Tool Rather Than a Threat
http://www.flickr.com/photos/davidcjones/1422043515
About me.
http://www.flickr.com/photos/andypowe11/3915450391
I live in Bath
I work at RAL
http://www.flickr.com/photos/andypowe11/3251538402
I get up in the morning
http://www.flickr.com/photos/mattbuck007/3710451826
...and catch a train
...and a bus
Wikimedia Commons Succinate_Dehydrogenase_1YQ3_and_Membrane.png
Wikimedia CommonsMGMT BDNA_1T38.png
I work on...
...and get to do cool stuff
Mixture of small-lab work...
...and big facility experiments
http://www.flickr.com/photos/loty/326761635
Lots of reading...
http://www.flickr.com/photos/amagill/38961674
...meetings...
http://www.flickr.com/photos/22819720@N02/2306780847
...too much travel...
...which leads to too much of this
http://flickr.com/photos/cliche/120070310/
http://www.flickr.com/photos/amagill/38961674
http://www.flickr.com/photos/loty/326761635
http://www.flickr.com/photos/mattbuck007/3710451826
http://www.flickr.com/photos/andypowe11/3251538402
http://www.flickr.com/photos/22819720@N02/2306780847
http://www.flickr.com/photos/davidcjones/1422043515
http://www.flickr.com/photos/laprimadonna/3611292727/
The first step...
...is to admit we have
http://www.flickr.com/photos/schnurrbart/43568532/ CC-BY-SA
0
25,000,000,000
50,000,000,000
75,000,000,000
100,000,000,000
1982 1986 1990 1994 1998 2002 2006
Submissions to Genbank
0
1.25
2.50
3.75
5.00
1982 1986 1990 1994 1998 2002 2006
Average Capacity of Human Scientist
The human scientist(that’s us)
Does. Not. Scale.
The web scales
Those things you hate about the web?
...these just show how well the web scales
The web is full of pieces of other people’s work
...so why doesn’t this work better for science?
I iz ur bandhangin in
ur gel
Partly the tools...
http://www.flickr.com/photos/hinkelstone/1357630710
...size of the community...
http://www.flickr.com/photos/craigcloutier/3818784742
...and attitude
http://flickr.com/photos/zanotti/314391903/ CC-BY
Let’s start with the tools...http://www.flickr.com/photos/flattop341/1085739925
Are there any good web tools for science...?
Literature management
...but this is just aggregation
Where’s the network?
http://www.flickr.com/photos/luc/2515255357
Question #1
Does it do something useful?
http://www.flickr.com/photos/vrogy/514733529
If it doesn’t. It isn’t.
Question #2
Does it work for your group?
If it doesn’t work here...
http://www.flickr.com/photos/respres/2476519142
...then it won’t work here
http://www.flickr.com/photos/mararie/3313582639/ CC-BY-SA
Question #3
Is there a community that is useful to you there?
http://www.flickr.com/photos/dullhunk/3746501010
http://search.twitter.com/search?q=stephen_curry+cameronneylon
...and if not are you prepared to build one?
The skill for the 21st century scientist?
http://www.flickr.com/photos/victoriapeckham/164175205
Network wiring and maintenance
http://www.flickr.com/photos/sneddon/2415792655
A lot of the noise...
...is maintaining connections
You have to build it...
http://www.flickr.com/photos/luc/2515255357
Founder effects.
But does it work?
An assertion.
I am made aware of every significant document released and every funding opportunity in Europe and North America relating to web based social tools for science, open access publication, and data policies within 48 hours of their release.
Without active searching.
Pulling items from external services via RSS
A shared social net
Sharing the load
http://www.flickr.com/photos/joi/2941559903 CC-BY
http://tinyurl.com/friendfeed-mthk-request
27 January 2009
http://gowers.wordpress.com/
27 January 2009
February 1 2009
http://gowers.wordpress.com/
27 January 2009
February 1 2009
March 10 2009
http://gowers.wordpress.com/ Nature, 15 October 2009
Hundreds of thousands...
http://onschallenge.wikispaces.com/Exp026
http://tinyurl.com/ons-challenge-spreadsheet
http://oru.edu/cccda/sl/descriptorspace/ds.php
http://slurl.com/secondlife/Drexel/165/178/24
200 individual measurements(plus 70 literature values)
20 researchers in four countriesOne undergraduate chemistry class
$6000 funding (for prizes and chemicals)
Beautiful Data O’Reilly Media spreads the knowledge of innovators through its books, online services, magazines, research, and conferences. Get the information you need from the experts you trust; visit www.oreilly.com to purchase this book.
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Rapid.
Efficient.
Superficial?
Lost in the stream...
http://flickr.com/photos/jason_burmeister/2053139930 CC-BY
http://flickr.com/photos/virtualsugar/316200555/ CC-BY
But if your objects are not open and available?
The more you publish, the more embedded in the network
Small, specific, examples. Relatively, few big wins
And limited to certain domains
50%
100%
100%
50%
100%
50%
100%
50%
100%
50%
100%
50%
100%
50%
We are still around here...
...but the network is growing
4
50%
3
2
1
100%
50%
4
50%
3
2
1
So what to do?
What is your problem?
http://www.flickr.com/photos/flattop341/1085739925
Is there a good tool?
http://www.flickr.com/photos/micha2305/2706588290/
Does it suit you/your group?
http://www.flickr.com/photos/laffy4k/88836657
Is there a community?
http://www.flickr.com/photos/nihilenz/2545518545
Are you willing to build one?
Choose to publish more
This is not going away
Learn to cope.
Threat or opportunity?
[email protected]://blog.openwetware.org/scienceintheopenhttp://slideshare.net/cameronneylonTwitter: @cameronneylonFriendfeed: cameronneylon
Thanks to:Sciencetwists, Friendfeeders, and the wider online community for ideas, criticism, and conversations.
Deepak Singh, Larry Lessig, Andy Powell, and John Wilbanks for presentation inspiration.
Flickr (and in particular @andypowe11) for images