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Key lecture for the EURO-BASIN Training Workshop on Introduction to Statistical Modelling for Habitat Model Development, 26-28 Oct, AZTI-Tecnalia, Pasaia, Spain (www.euro-basin.eu)
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Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011
Data Management and Integration within EUROBASIN
Janine Felden & Stéphane Pesant
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011
Who I am.......
• Master Marine Microbiology • PhD: quantification benthic biogeochemical processes and in situ
flux measurements in cold seep ecosystems (chemosynthetic environments)
• PostDoc: – data manager in the EU Project HERMIONE (Hotspot Ecosystem Research and Man's
Impact On European Seas) & benthic activity of arctic deep sea sediment
• NOW: data curator in EUROBASIN (WP1) – to support project partners during data submission and mining to and
from PANGAEA
© MARUM, Bremen © MARUM, Bremen © MARUM, Bremen © MARUM, Bremen
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011
EUROBASIN WP 1 Objectives:
• Develop methods to consolidate and integrate long‐term observations from European and international databases
• Assemble historical data, new field observations andexperimental results into comprehensive datasets formodelling and prediction of the Atlantic Ocean ecosystem andrelated services.
work with PANGAEA as database
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011
What is PANGAEA?
Data are stored georeferenced in space and time in a relational database and a tape archive.
The data content is accessible on the Internet via a search engine, a data warehouse and web services.
The system is open to any scientist or project to archive and publish data.
Rijksmuseum Research Library, Amsterdam
©http://libraryjum
pers.web
s.com/
(...is a data library for earth system research.)
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011
Data submission via
Online ticket system (JIRA Client):
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011
Data PublicationPANGAEA provide
• free and Open Access or Restricted Access (password) to data,
according to data policy
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011
Data Publication
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011
Data Publication‐ PANGAEA provide‐
• free and Open Access or Restricted Access (password) to data,
according to data policy
• free and Open Access to metadata
• Persistent and web‐resolvable Digital Object Identifiers (DOI)
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011
Data Publication‐ DOI Model ‐
• Each data point is fully citable with a persistent identifier (DOI)
• Cross‐reference with journal articles
• Pre‐publication, peer‐review process
• Thomson Reuters and Elsevier will soon launch Data Citation
Impact Factors based on data DOI
• Creative Commons Attribution license which requires that
datasets are cited when data are used & re‐used
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011
Data Publication
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011
PANGAEA Data Mining
• Google‐like & advanced metadata discovery (public)
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011
PANGAEA Search
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011
PANGAEA Data Mining
• Google‐like & advanced metadata discovery (public)
• Data Warehouse for mass extraction (EuroBASIN partners)
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011
Data Warehouse
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011
Data Warehouse
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011
Data Warehouse
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011
Data Warehouse
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011
PANGAEA Data Mining
• Google‐like & advanced metadata discovery (public)
• Data Warehouse for mass extraction (EuroBASIN partners)
• Web‐services linking data publications and journal
publications, e.g. Elsevier, Copernicus, AGU and Springer
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011
Link to publisher
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011
Sum up
• PANGAEA offers various tools and support for data submission and data mining
• PANGAEA data publications provide benefits for the authors and scientific community (e.g.DOI, permanent data storage)
! PANGAEA data quantity & quality depends on the data that are provided by the scientist !
Thus:• support the work of EUROBASIN WP1! • for any data work including worries and ideas contact us
(Stéphane Pesant ([email protected]) or me (jfelden@mpi‐bremen.de))