Woodrow Wilson Center - Sloan - Hastings - Venter - Nano_synbio2_electronic_final

Embed Size (px)

Citation preview

  • 8/14/2019 Woodrow Wilson Center - Sloan - Hastings - Venter - Nano_synbio2_electronic_final

    1/57

    Synthetic

    Biolo

    gy

    Project

    /

    Syn

    Bio

    2

    SYNBIO 2 / March 2009

    Regulating FiRst-geneRation PRoducts oF synthetic B iology

    new life,

    old bottles

    new life,

    old bottles

  • 8/14/2019 Woodrow Wilson Center - Sloan - Hastings - Venter - Nano_synbio2_electronic_final

    2/57

    AcronymsPresent in: New Lie/Old Bottles

    APHIS Animal and Plant Health Inspection Service

    DNA Deoxyribonucleic acid

    EPA Environmental Protection Agency

    EU European Union

    FDA Food and Drug Administration

    FDCA Federal Food, Drug, and Cosmetic Act

    FIFRA Federal Insecticide, Fungicide and Rodenticide Act

    IBC Institutional Biosaety Committee

    MCAN Microbial Commercial Activity Notice

    MIT Massachusetts Institute o Technology

    NEPA National Environmental Policy Act

    NIH National Institutes o Health

    OSTP White House Ofce o Science and Technology Policy

    RAC Recombinant DNA Advisory Committee

    RDNA Recombinant DNA

    RGs Risk Groups

    TERA TSCA Experimental Release Application

    TSCA Toxic Substances Control Act

    USDA US Department o Agriculture

  • 8/14/2019 Woodrow Wilson Center - Sloan - Hastings - Venter - Nano_synbio2_electronic_final

    3/57

    2

    Synthetic

    Bio

    lo

    gy

    Pro

    ject

    /

    new

    life,

    old

    BottleS:regulating

    firS

    t-

    generation

    ProductS

    ofSynthetic

    Biology

    Thisreportwasmadepossiblewithagrantfro

    mtheEuropeanCommissiontosupp

    ortpilotprojectsonTransatlanticm

    ethodsforhandling

    globalchallenges.Itisbasedonindependentresearchanddoesnotrepresentthe

    viewsoftheEuropeanCommission

    ortheWoodrowWilson

    Internation

    alCenterforScholars.Formoreinfo

    rmation,see:www.ls

    e.ac.u

    k/nanore

    gulation.

    table of conens

    About the Author 1

    Foreword 3

    Acknowledgements 5

    Executive Summary 7

    I Introduction: Biotechnology Past and Synthetic Biology Future 11

    A Introduction 11

    B Biotechnology Past: The Development o Regulatory Policies or Products o rDNA Biotechnology 12

    C Synthetic Biology Future: The Relevance o Biotechnology Regulation to Synthetic Biology 15

    II Synthetic Biology: Defnitions, Applications, and Risks 16

    A What is Synthetic Biology? 16

    B Potential Applications 181 Biouels 19

    2 Pharmaceuticals 20

    III Policies and Options: Managing the Risks o New Technologies 21

    A Policy Goals and Framing New Technologies 21

    B Synthetic Biology: Framing and Risk Characterization 23

    1 Accidental release risk assessment 24

    2 Intentional non-contained use 25

    C Comparing Risks o Biotechnology and Synthetic Biology 27

    IV Applying the Biotechnology Regulatory Framework to Synthetic Biology 29

    A Developing the policy ramework or the regulation o Biotechnology 29

    B Applying Biotechnology Policy and Regulation to Synthetic Biology 31

    1 Research and Development Activities in Contained Facilities 31

    2 Commercial or Industrial Production using Synthetic Microorganisms in a Contained Facility 38

    3 Intended Environmental Releases o Synthetic Microorganisms 41

    V Conclusions 46

    Endnotes 47

    Bibliography 49

  • 8/14/2019 Woodrow Wilson Center - Sloan - Hastings - Venter - Nano_synbio2_electronic_final

    4/57

    SYNBIO 2 / March 2009

    Michael Rodemeyer

    new life,

    old bottles

    new life,

    old bottlesRegulating FiRst-geneRation PRoducts oF synthetic B iology

  • 8/14/2019 Woodrow Wilson Center - Sloan - Hastings - Venter - Nano_synbio2_electronic_final

    5/57

  • 8/14/2019 Woodrow Wilson Center - Sloan - Hastings - Venter - Nano_synbio2_electronic_final

    6/57

    1

    From 2000 unti l 2005, Mr. Rodemeyer was the Executive Director o the Pew Initiative on Food

    and Biotechnology, a nonprot research and education project on genetically modied oods

    unded by a grant rom The Pew Charitable Trusts. Beore that, Mr. Rodemeyer held a variety

    o posts in the ederal government, including Assi stant Director or Environment in the Oce o

    Science and Technology Policy in the Clinton administr ation and Chie Democratic Counsel or

    the U.S. Congress House Committee on Science and Technology. From 1976 through 1984, Mr.

    Rodemeyer was an attorney with the Federal Trade Commission, working on consumer protec-

    tion and antitrust issues.

    Currently, Mr. Rodemeyer is an independent consultant and writer on science, technology and

    environmental policy. He is also an adjunct instructor in the Science, Technology and Society

    Department in the School o Engineering and Applied Sciences at the University o Virgin ia and

    has previously taught congressional and environmental policymaking at the Johns Hopkins Uni-

    versitys Zanvyl Krieger School o Arts and Sciences. He has lectured widely on technology and

    environmental policy issues.

    Mr. Rodemeyer graduated with honors rom Harvard Law School in 1975 and received his under-

    graduate degree rom Princeton University in 1972. He lives in Charlottesville, Virginia.

    About te Autor

  • 8/14/2019 Woodrow Wilson Center - Sloan - Hastings - Venter - Nano_synbio2_electronic_final

    7/57

  • 8/14/2019 Woodrow Wilson Center - Sloan - Hastings - Venter - Nano_synbio2_electronic_final

    8/57

    3

    By their very nature, emerging technologies challenge our approaches to oversight and regulation.

    The novel properties exhibited by these technologies can underpin innovation in areas ranging

    rom medicine to energy production, but can also present new risks and challenges to exist ing

    regulatory rameworks.

    Along with nanotechnology, synthetic biology is a cr itical emerging technology that has gained the

    attention o both governments and the pr ivate sector. It builds upon the advances o biotechnology,

    applying the principles o engineering to the world o biology to nely tune existi ng organisms and

    even develop new ones rom scratch. How this emerging science and its applications are developed

    and utilized by society wil l ultimately shape how it is regulated. Some scientists argue that synthetic

    biology is just a more powerul version o genetic engineering and thus does not need much in the

    way o new regulations. Though the rst generation o synthetic biology-derived microorganisms

    is unli kely to be much dierent rom those we have already seen, subsequent generations are li kely

    to be much more complex displaying novel characterist ics with little precedence in natu re.

    It would be easy to relegate discussions about oversight to the backburner. Procrast ination bears a

    risk, however, since a productive dialogue may become more dicult as the technology matures

    and stakeholders become divided in their opinions about risks and benets. One can start a dis-

    cussion now with the basic question o whether existing regu lationsor instance, the long-usedCoordinated Framework or Biotechnologywil l work with synthetic biology.

    In this paper, Michael Rodemeyer o the University o Virginia provides an analysis o U.S. regula-

    tory options or rst-generation synthetic biology products. He examines the benets and drawbacks

    o using the existi ng U.S. regulatory r amework or biotechnology to cover products and processes

    enabled by synthetic biology. He nds that the similarities between biotechnology and synthetic

    biology are abundant enough to provide a good starting point, though how this emerging technol-

    ogy is ra med or policymakersas novel and potentially dangerous, or amiliar and saewi ll

    infuence the makeup o any uture regulatory policies.

    Foreword

    David Rejeski

    Director, Synthetic Biology Project

    Director, Project on Emerging Nanotechnologies

    Woodrow Wilson International Center for Scholars

  • 8/14/2019 Woodrow Wilson Center - Sloan - Hastings - Venter - Nano_synbio2_electronic_final

    9/57

  • 8/14/2019 Woodrow Wilson Center - Sloan - Hastings - Venter - Nano_synbio2_electronic_final

    10/57

    5

    Acknowledgments

    Throughout my career, Ive had the good or-

    tune to work with outstanding scientists and en-

    gineers who have understood the importance o

    engaging policymakers on technical issues. Less

    requently, Ive had the opportunity to work

    with policymakers who likewise understand the

    need to engage with scientists and engineers.

    None o these ormer colleagues is likely to win

    the accolades o peers or trying to bridge the di-

    vide between physicis t and novelist C.P. Snows

    two cultures. But their will ingness to do so may

    mark the dierence between societies that can

    harness scientic knowledge and technologi-

    cal change or the benet o all and those that

    perceive themselves to be resentul victi ms o

    technologys whims. To these envoys rom both

    cultures we owe a great debt o appreciation.

    Synthetic biology is the latest example o anemerging technology with remarkable promise

    to apply biology to societal needs, rom renew-

    able energy and environmental restoration to

    new drugs and diagnostic tools. Synthetic biol-

    ogy, like other powerul technologies, has also

    raised concerns, many o which have been raised

    by scientists themselves. The question now ac-

    ing policymakers is how to ensure th at the tech-

    nology is developed in a way that maximizes

    benets and minimizes risks , while allowing or

    change as new scientic knowledge is gained.

    This report is an eort to look orward by look-

    ing back: applying some o the lessons learned

    about the regulation o biotechnology over the

    past 30 years to the emerging area o synthetic

    biology. It is by no means intended to be a com-

    prehensive set o recommendations or the gov-

    ernance o synthetic biology, but rather a way to

    begin engaging the technical and policymaking

    communities in asking some o those questions.

    I want to express my appreciation to the Syn-

    thetic Biology Project at the Woodrow Wilson

    International Center or Scholars or this oppor-

    tunity to explore some o the governance ques-

    tions associated with synthetic biology. I also

    beneted rom the assistance o a number o legalscholars, regulatory experts and scientists to help

    me navigate some o the more complex shoals.

    I would particularly like to acknowledge the

    help o Jacqueline Corrigan-Curay, Mark Segal,

    Brent Erickson, Julia Moore, Robert Friedman,

    Michele Garnkel, Fran Sharples, Anne-Marie

    Mazza, David Rejeski, Patrick Polischuk, Ele-

    onore Pauwels and Andrew Maynard. I would

    also li ke to acknowledge those who reviewed

    earlier versions o thi s report and oered valuable

    comments, including J. Clarence (Terry) Davies,

    L. Val Giddings and Wendell Lim. Wh ile I owe

    my thanks to them or improving the report,

    the contents and opinions in the report are en-

    tirely my own and should not in any way be at-

    tributed to them or viewed as an endorsement.

    Similarly, any errors let remain ing despite their

    assistance must be laid solely at my doorstep.

    Like the opinions expressed herein, any errors

    are entirely my own.

    Michael Rodemeyer

    Charlottesville, Virginia

    March 2009

  • 8/14/2019 Woodrow Wilson Center - Sloan - Hastings - Venter - Nano_synbio2_electronic_final

    11/57

  • 8/14/2019 Woodrow Wilson Center - Sloan - Hastings - Venter - Nano_synbio2_electronic_final

    12/57

    7

    Executive Summary

    Regulatng Ne Tecnlg:

    Te Gldlcks Dlea

    The contribution o innovation and new tech-

    nology to economic well-being has by now

    become so well established as to require little

    elaboration. Technology can create valuable and

    benecial new products, increase eciency and

    productivity and lower costs, all contributing

    to improved consumer welare and economic

    growth. In recent years, new technologies in

    medicine, computers, communication and ag-

    riculture have revolutionized many industries

    and reshaped societies.

    But in addition to benets, new technologies can

    present new health or environmental risks that

    can pose dicult chal lenges or public policy.

    Regulators ace t he Goldilocks dilemma: the

    need to get regulation just right. I they aretoo precautionary, they will err by keeping sae,

    valuable new products o the market. I they are

    not precautionary enough, a product could come

    to market that could cause unacceptable harm.

    The regulatory challenge is made all the more

    dicult because the inormation needed to assess

    risks o a new technology is oten imperect and

    uncertain, a not-surprising situation given its

    very novelty. In such cases, policymakers oten

    look to previous experience in trying to deter-

    mine how to address the risks and regulation o

    new technologies.

    The discovery o gene-splicing biotechnology

    techniques in the mid-1970s is an exa mple o

    a new technology that led to questions about

    appropriate regulation. Shortly ater that break-

    through discovery, scientists raised concerns

    about the potential or harm that could result

    i microbes engineered through this new re-

    combinant DNA (rDNA) splicing process were

    accidentally released rom a laboratory. They

    eared that some harmul microorganisms could

    reproduce and spread, and the probability o such

    an outcome was at that point largely unknown.

    Scientists called or oversight by the National

    Institutes o Health to set standards to ensurethat laboratory research was carried out in a

    manner that protected laboratory workers, the

    community and the environment. In the mid-

    1980s, as products began to be developed or use

    outside the laboratory, the Reagan administra-

    tion developed a Coordinated Framework

    or the regulation o biotechnology products.

    The Coordinated Framework established the

    policy that biotechnology production processes

    posed no novel risks compared to conventional

    production processes and that risks should be

    thereore regulated under existing laws based on

    the risk characteristics o the nal product, not

    the method by which it was made. As a result,

    in the United States, biotechnology products

    are regul ated under the same laws that apply to

    comparable conventional products.

    Sntetc Blg

    Today, the next biotechnology revolution is

    brewing: synthetic biology. No longer limited

    to laborious gene-splicing rom one organism to

    another, scientists are learning how to construct

    genetic code in the laboratory, with the hope o

    using synthetic genetic elements to build novel

    organisms that could be used or multiple pur-

    poses, such as manuacturing drugs or invading

    cancer cells in the body. While most commercialapplications are likely to be years away, research-

    ers today are working on synthetic microorgan-

    isms to produce the next generat ion o clean,

    renewable biouels and o certain rare drugs.

    Scientists have once again ta ken the lead in

    raising concerns about the risks o sy nthetic

    biology research. The issue that has garnered

    the most serious attention is the concern over

  • 8/14/2019 Woodrow Wilson Center - Sloan - Hastings - Venter - Nano_synbio2_electronic_final

    13/57

    8

    Synthetic

    Bio

    lo

    gy

    Pro

    ject

    /

    new

    life,

    old

    BottleS:regulating

    fir

    St-

    generation

    ProductS

    ofSynthe

    tic

    Biology

    biosecuritywhether synthetic biology technol-

    ogy could assist bioterrorists in creating more

    dangerous pathogens. But todays scientists also

    ace the same kind o biosaety concerns that were

    initially rai sed and subsequently addressed about

    the rst genetically engineered microbes 35 years

    agothe risk s o harm to laboratory workers, the

    community and the environment should a harm-

    ul synthetic microbe be accidentally released and

    spread through the environment.

    The initial raming o a new technology can have

    a strong impact on regulatory decis ions. A new

    technology that is ramed as being similar to an

    existing, amiliar product reassures the public

    about its saety, allows policymakers to apply ex-

    isting regulatory approaches and provides indus-

    try with a clear and predictable path to market.

    On the other hand, raming a new technology as

    being truly novel can raise public ears about its

    saety, pose a challenge or regulators and present

    an uncertain commercial ization path or industry.

    Many scientists argue that synthetic biology is just

    a more poweru l version o the genetic engineer-ing that has been around or nearly 30 years and

    should thereore be treated in the same way.

    This report examines that assumption as it applies

    to the likely rst generation o synthetic biology

    products: synthetic microbes engineered to produce

    biouels and drugs. The potential environmental

    and public health risks o a synthetic microorganism

    arise rom two scenarios: an accidental release rom

    a contained acility and an intentional release into a

    non-contained environment. These risks are simi-

    lar in kind to the potential risks o microbes engi-

    neered through rDNA technology.

    The rst generation o synthetic biology mi-

    croorganisms is unlikely to be remarkably di-

    erent rom or more complex than those created

    through other genetic engineering techniques,

    and will probably not pose diculties in risk a s-

    sessment. As the technology matures, however,

    it has the capability to produce complex organ-

    isms whose genomes have been assembled rom a

    variety o sources, including articial sequences

    designed and built in the laboratory. Whi le the

    risk issues and risk assessment questions are simi-

    lar to those raised by any genetically engineered

    organism, providing adequate answers to those

    questions may be signicantly more dicult or

    such complex synthetic microorganisms.

    Te Callenge f Uncertant

    In rDNA biotechnology, regulators have typical-ly evaluated the risks o genetically engineered

    microorganisms by comparing them to their

    well-known unmodied counterparts and un-

    derstanding the unct ion o the inserted genetic

    material. Regulators can compare the naturally

    occurring and genetically engineered varieties

    to ensure that the new organism is as sae as

    its known, conventional counterpart.

    In complex organisms engineered through syn-

    thetic biology, however, it may be dicult to

    determine an organisms genetic pedigree i

    it has been assembled rom multiple sources or

    contains articial DNA. In addition, there is a

    question o whether the genetic sequences will

    continue to unction as they did in their original

    sources, or whether there could be a synergistic

    reaction among the new components that leads

    to dierent unctions or behavior. Scientists

    may be able to predict the unctions o specic

    new genetic alterations based on growing u n-

    derstanding o comparable genetic components,

    but an organism assembled rom genetic parts

    derived rom synthetic or natural sources could

    display emergent behavior not seen in the

    original sources. The complexity o advanced

    synthetic microorganisms creates additional

    uncertainty in the ability to predict unction

    rom sequences and structures. Existing risk

    assessment methods may not prove adequate

    or predicting outcomes in complex adaptive

    systems. In addition, while many scientists be-

    lieve that engineered organisms are unl ikely tosurvive or reproduce in a natural environment,

    the capability o synthetic organisms to mutate

    and evolve raises questions about the poten-

    tial o synthetic organisms to spread and to ex-

    change genetic materials with other organisms

    i released into the environment. While these

    risks are aga in similar to those raised by any ge-

    netically engineered organism, it may be more

  • 8/14/2019 Woodrow Wilson Center - Sloan - Hastings - Venter - Nano_synbio2_electronic_final

    14/57

    9

    dicult to asse ss in advance the risk o complex

    synthetic organisms developed in the uture.

    Under such conditions o uncertainty, the chal-

    lenge or regulators will be how to make de-

    cisions that neither over-regulate nor under-

    regulate. Risk research is an urgent requirement

    parallel to product development. While generic

    research will be useul, in many cases risk re-

    search must also be carried out in the context

    o speciic organisms, products and intended

    applications.

    Sntetc Blg Prducts Regulated

    Under Current Btecnlg Fraerk

    Most o the regulatory policies and gu idelines

    original ly adopted to address these risks or bio-

    technology appear to cover synthetic microor-

    ganisms in stages rom research through com-

    mercialization, although there are some gaps and

    questions that agencies will need to address.

    The National Institutes o Health (NIH) Guide-

    lines or rDNA Research are the principal lineo deense against the accidental release o a

    harmul genetically engineered organism rom

    contained research laboratories. Assessing the

    potential risk o a proposed research activity and

    determining the appropriate level o conne-

    ment and biosaety procedures is at the heart

    o the NIH guideline-development process. In

    2008, the NIH Recombinant DNA Advisory

    Committee (RAC) recommended revisions to

    the Guidelines to cover synthetic biology re-

    search and to provide clearer guidance to the re-

    search community on how to manage synthetic

    biology research, given the greater uncertainty

    involved with assessing its potential risks.

    For commercial products, the existing regulatory

    ramework or biotechnology is likely to cover

    most anticipated microbial products o synthetic

    biology, although agencies may need to modiy

    some rules to clariy their intended application.

    The initial synthetic biology products are likely

    to be relatively simple modications; however,

    as the technology matures, regulatory agencies

    will ace challenges in assessing the potential

    risks o more complex synthetic organisms in

    order to determine appropriate biosaety con-

    trols. The greater uncertainty associated with

    the risk asses sment o complex synthetic organ-

    isms will lead to dierent regulatory outcomes

    because o the regulatory patchwork that results

    rom applying existing product laws. Depend-

    ing on their nature, some products will requireextensive testing and a pre-market regulatory

    saety approval, while others may go to market

    with considerably less test ing and oversight. To

    use existing laws, a number o agencies have

    creatively stretched their authorities to cover

    biotechnology products, in ways that have gen-

    erated criticism o both over- and under-regu-

    lation. In particular, some critics have argued

    that the Toxic Substances Control Act, which

    the Environmental Protection Agency would

    likely use to regulate synthetic microbes, is an

    inadequate regulatory approach or managing

    the risk o products o new technologies.

    At the same time, while the process has not been

    without problems, the regulatory ramework

    or biotechnology has general ly been success-

    ul, particularly in comparison to the process-

    oriented regulatory approaches o Europe and

    other nations. Numerous valuable biotechnol-

    ogy products, both in biomedicine and in ag-

    riculture, have been successully developed and

    commercialized throughout the United States

    and around the world, without any public health

    or environmental problems. U.S. consumers,

    particularly compared to their European coun-

    terpart s, appear to have condence in the regu-

    latory system.

    While the biotechnology regulatory model may

    well be the likely direction or the regulation

    o synthetic biology products, it is not a per ectmatch and carries with it some inherent prob-

    lems. New legislation specically or synthetic

    biology is an unlikely option, but some have

    urged Congress to rationalize and modernize

    the regulation o new converging technologies,

    instead o attempting to shoehorn each new area

    o technological development into laws previ-

    ously written or a dierent set o issues.

  • 8/14/2019 Woodrow Wilson Center - Sloan - Hastings - Venter - Nano_synbio2_electronic_final

    15/57

  • 8/14/2019 Woodrow Wilson Center - Sloan - Hastings - Venter - Nano_synbio2_electronic_final

    16/57

    11

    I. Introduction: Biotecnology Pastand Syntetic Biology Future

    A. Intrductin

    Thirty-ve years ago, Herb Boyer and Stanley Co-

    hen discovered the principles o recombinant DNA

    (rDNA), or gene splicing, technology, ushering in

    the era o modern biotechnology. Even as early re-

    searchers eagerly began to anticipate the potential ap-

    plications o rDNA technology or medicine, agricul-

    ture and industry, some o them raised concerns about

    potential harm to public health and the environment

    should these newly created genetically engineered

    organisms be accidentally released rom the laboratory

    and reproduce and spread in the environment.

    The act that a new technology was raising questions

    about risksand appropriate policies to manage

    themis hardly surprising. New technology oten

    brings with it both promises and perils, and nding

    the right policies to maximize benets while mini-

    mizing risks is not an easy task. New science and

    technology can challenge old paradigms and pose

    questions or which there are no clear answers. What

    was unique about the introduction o biotechnology,

    however, was that it was the scientists themselves

    who were raising the questions at the very early stag-

    es o their own research. From that beginning, poli-

    cies to manage biotechnologys risks developed and

    evolved much as the science and technology itsel.

    While biotechnology and its regulation have not

    always kept pace with each other or proceeded very

    smoothly, the system has , despite its faws, largely

    worked: the past ew decades have witnessed the

    introduction o numerous biotechnology-derived

    drugs, diagnostics and crops without apparent harm

    to the public health or the environment.

    Today, advances in genetics, inormation technolo-

    gy and DNA synthesis are leading to the emergence

    o a new set o potentially ar-reaching tools under

    the name o synthetic biology. To some extent,

    synthetic biology is a logical extension o rDNA

    biotechnology. Instead o cutting and pasting dis-

    crete genetic materials rom existing organisms, as

    with rDNA biotechnology techniques, researchers

    are increasingly able to design and build their own

    genetic materials rom scratch in the laboratory and

    then to synthesize those articial genetic constructs

    into novel organisms with engineered unctions.

    While synthetic biology mostly remains at the basic re-

    search stage, many believe that it will be at least as revo-

    lutionary as rDNA technologyand probably more so.

    Synthetic biology may be able to deliver on some o the

    as-yet unrealized hopes o biotechnology in terms o

    developing new drugs, diagnostics and environmentally

    riendly biouels and other industrial chemicals.

    As the process o turning science into technology

    begins in earnest, the issue o balancing benets and

    risks is being raised again. As with the debate about

    early rDNA biotechnology, concerns have been

    raised about the potential risks to public health and

    the environment rom accidental releases and rom

    intentional non-contained uses. In addition, synthetic

    biology has raised serious concerns about biosecurity:

    the potential o the technology to enhance the ability

    o bioterrorists to develop more virulent pathogens.

    Some in the scientic community have once again

    taken the lead in calling or sel-governance (Church,

    2005). In addition, some non-governmental orga-

    nizations have urged caution and pushed or ormal

    oversight o synthetic biology (ETC Group, 2007).

    Are the U.S. regulatory policies or rDNA biotechnol-

    ogy products developed over the past 25 years an ap-

    propriate template or rst-generation synthetic biology

    products? To what extent does the existing regulatory

    ramework developed or biotechnology products ad-

    equately address concerns about potential risks rom ac-

    cidental or intentional releases o synthetic organisms?

  • 8/14/2019 Woodrow Wilson Center - Sloan - Hastings - Venter - Nano_synbio2_electronic_final

    17/57

    12

    Synthetic

    Bio

    lo

    gy

    Pro

    ject

    /

    new

    life,

    old

    BottleS:regulating

    fir

    St-

    generation

    ProductS

    ofSynthetic

    Biology

    B. Bitechny Past: The Devepment Reuatry Picies rPrducts rDNA Bitechny

    The history o the development o a regulatory

    ramework or rDNA biotechnology has strong

    relevance or issues concerning the governance o

    synthetic biology. In 1974, only a short time a ter

    Cohen and Boyers discovery, several leading mo-

    lecular biologists raised concerns about the saety

    o rDNA research and called or a moratorium

    on certain research until saety guidelines could

    be developed and more experience gained to as-

    sess risk (Berg, et al., 1974). Meeting in Asilomar,

    Caliornia, in 1975, the molecular biologists cal led

    or the development o saety guidelines and a

    process or reviewing the saety o proposed rDNA

    experiments (Berg, Ba ltimore, Brenner, Roblin

    III, & Singer, 1975). These recommendations led

    to the establishment o the Recombinant DNA

    Advisory Committee (RAC) at the National In-

    stitutes o Health (NIH) to oversee the saety o

    rDNA research and to dene appropriate standards

    or containment o potentially risky research.

    As the ir st commercial products intended or

    non-contained use in the environment began

    to emerge rom laboratories in the mid-1980s,

    ederal regulators charged with responsibility or

    protecting public health and the environment

    grappled with applying existing laws to new

    biotechnology products. In 1986, the White

    House Oce o Science and Technology Policy

    published a Coordinated Framework or the

    regulation o biotechnology (51 Fed. Reg. 23302

    [1986]). That policy statement, which remains the

    basic guidance document or U.S. biotechnology

    policy, established a number o key principles.The Coordinated Framework, refecting scientic

    consensus, stated that recombinant DNA technol-

    ogy did not present any unique risks or pose any

    specic problems that were dierent than those o

    conventionally produced organisms. As a result,

    the ocus o government regulation should be

    the risk characteristics o the nal product, not

    the process by which it was made. Looking at the

    existing regulatory authority, the policy statement

    urther concluded that then-existing laws were

    adequate to deal with the potential risks associ-

    ated with a ny biotechnology-derived product

    likely to be developed in the oreseeable uture.

    As a consequence, since the mid-1980s, bio-

    technology products developed in the United

    States have been reviewed under the same sets

    o laws and regu lations that apply to conven-

    tionally produced products (Tables 1-3). This

    technology-neutral approach means that the type

    o regulatory review depends on the specic cat-

    egory o the product . For example, the Food and

    Drug Administration (FDA) regulates ood, eed

    Ttle f Act Abbreatn Agenc Cte

    The Federa Insecticide, Funicide, and Rdenticide Act FIFRA EPA 7 USC 136

    The Txic Substances Cntr Act TSCA EPA 15 USC 2601

    The Fd, Dru, and Csmetic Act FDCA FDA; EPA 21 USC 301

    The Pant Prtectin Act PPA USDA 7 USC 7701

    The Virus Serum Txin Act VSTA USDA 21 USC 151

    The Anima Heath Prtectin Act AHPA USDA 7 USC 8031

    The Federa Meat Inspectin Act FMIA USDA 21 USC 601

    The Putry Prducts Inspectin Act PPIA USDA 21 USC 451

    The E Prducts Inspectin Act EPIA USDA 21 USC 1031The Anima Damae Cntr Act ADCA USDA 7 USC 426

    The Anima Weare Act AWA USDA 7 USC 2131

    The Natina Envirnmenta Prtectin Act NEPA (AII) 42 USC 4321

    TABLE 1. FEDERAL LAwS PoTENTiALLy APPLiCABLE To GE oRGANiSmS AND PRoDUCTS

    DERivED FRom ThEm

    Surce: Pew Initiative n Fd and Bitechny (2004).

  • 8/14/2019 Woodrow Wilson Center - Sloan - Hastings - Venter - Nano_synbio2_electronic_final

    18/57

    13

    and ood additives, as well as human and anima l

    drugs, biologics and medical devices. The Envi-

    ronmental Protection Agency (EPA) regulates

    pesticides, pesticide residues in ood and certain

    new chemical substances. The U.S. Depart-

    ment o Agriculture (USDA) regulates potential

    animal and plant pests under various laws. Since

    each agency operates under di erent laws and

    regulations, the type o regulatory review that a

    product will receive diers dramatical ly. For ex-

    ample, drugs and pesticides cannot be marketed

    until the regulatory agency has ound that the

    products are sae, and the burden o proo is

    on the developer. (The denit ion o saety also

    changes rom law to law.) On the other hand,

    new, conventionally bred whole-ood varieties

    may be introduced to the market without any

    prior regulatory review; the ood manuacturer is

    responsible or ensuring the saety o ood. While

    biotechnology products are regulated under these

    general authorities, each agency has had to in-

    terpret and apply these laws to biotechnology

    products through regulations and guidance.

    Even ater more than 20 years, the regu latory

    ramework or rDNA biotechnology products

    continues to evolve1 and generate controversy.

    Some critics have argued that t he biotechnol-

    ogy regulatory system is i nadequate to address

    the range o potential risks posed by various

    biotechnology products (see, e.g., McGarity,

    2002; Bratspies, 2004), while others argue that

    biotechnology is heavily overregulated (see,

    e.g., Miller & Conko, 2005; McHughen, 2007;

    Strauss, 2003).

    Despite these continuing debates, the regulatory

    system or biotechnology has generally worked

    as intended. Useul and valuable new products

    developed through rDNA biotechnology have

    come to the market. Recombinant DNA bio-

    technology has revolutionized the development

    o new drugs, therapies and medical diagnostics.

    An estimated 200 new therapies and vaccines

    have been developed through biotechnology,

    with hundreds more in clinical testing (Biotech-

    nology Industry Organization, 2008). In agricul-

    ture, companies have developed new varieties o

    pest-resistant and herbicide-tolerant corn, soy-

    beans, cotton and canola that have been rapidly

    adopted by U.S. and Canadian armers (U.S.

    Department o Agriculture, National Agricul-

    tural Statistics Service, 2008). In 2006, publicly

    traded U.S. biotech companies were estimated

    to have generated nearly $59 billion in revenues

    (Biotechnology Industry Organization, 2008).

    During this period, the biosaety record o new

    biotechnology products has been reassuring. Cer-

    tainly, the major ears that were expressed in the

    early stages o the technology have not come to

    pass.2 Whether that result is because scientists and

    industry have been cautious, because regulators

    have done a good job in keeping risky products

    Genetcall Engneeredorgans

    Agen La

    PlANTS

    A Pants USDA-APHIS PPA

    ANIMAlS

    Animals (including fsh) FDA FDCA

    Livestock USDA AHPA; ADCA

    MICRooRgANISMS EPA; USDA TSCA; PPA

    Genetcall Engneeredorgans

    Agen La

    HUMAN FooDS

    wle Fds

    Pants (i.e., veetabes, ruits) FDA-CFSAN FDCA

    Meat, Putry, and esUSDA-FSIS FMIA; PPIA; EPIA

    FDA-CVM FDCA

    Fish FDA-CVM FDCA

    Fd Artcles

    Fd additives FDA-CFSAN FDCA

    Dietary suppements FDA-CFSAN FDCA

    HUMAN FooDS FDA-CVM FDCA

    DRUgS AND BIologICS

    Human drus FDA-CDER FDCA

    Human biics FDA-CBER FDCA

    Anima drus FDA-CVM FDCA

    Anima biics USDA-APHIS VSTA

    HIgH-VAlUE PRoDUCTS

    Csmetics FDA-CFSAN FDCA

    TABLE 2. FEDERAL LAwS PoTENTiALLy APPLiCABLE To GE

    oRGANiSmS AND PRoDUCTS DERivED FRom ThEm

    (uncertain areas in italics)

    TABLE 3. ThE REGULATioN oF PRoDUCTS DERivED FRom

    GENETiCALLy ENGiNEERED oRGANiSmS

    (uncertain areas in italics)

    Surce: Pew Initiative n Fd and Bitechny (2004).

  • 8/14/2019 Woodrow Wilson Center - Sloan - Hastings - Venter - Nano_synbio2_electronic_final

    19/57

    14

    Synthetic

    Bio

    lo

    gy

    Pro

    ject

    /

    new

    life,

    old

    BottleS:regulating

    fir

    St-

    generation

    ProductS

    ofSynthetic

    Biology

    o the market or because o simple good ortune,

    remains a debatable question. In the absence o

    perceived ood- or drug-saety problems, many

    U.S. consumers remain unaware o the ubiquity

    o biotechnology products (PIFB, 2006). What-

    ever the reasons, the U.S. public has acquiesced in

    the introduction o biotechnology products and

    appears to trust the regulatory system to ensure

    saety. A more dicult question i s whether the

    regulatory system has had the eect o keeping

    sae and useul products o the market by rais-

    ing regulatory and economic barriers to entry, as

    some have argued (Miller & Conko, 2005).

    That is not to say that the regulation o biotechnol-

    ogy, particularly in the area o agriculture and ood,

    has been without problems in the United States.3

    But U.S. regulation has been straightorward by

    comparison with that in other parts o the world,

    especially Europe, where popular opposition to ge-netically engineered ood and crops remains strong.

    The reasons or European rejection o genetically

    engineered oods are complex (Jasano, 2005), but

    one major actor unquestionably is the mad cow

    ood crisis in the mid-1990s, which shook consum-

    er condence in the saety o the ood supply and

    created distrust o the governments that had been

    consistently assuring the public that bee was sae

    to eat. For a number o reasons, politicians in the

    European Union (E.U.), refecting European public

    opinion, have been reluctant to approve genetically

    engineered oods and crops, despite general scien-

    tic agreement that they are likely to be substan-

    tially equivalent to their conventionally produced

    counterparts. E.U. policy, in direct contrast with

    U.S. policy, more stringently regulates genetically

    engineered crops and oods under specic new laws

    and requires mandatory labeling. As a consequence

    o regulation and consumer opinion, ew genetical-

    ly engineered crops and oods have been approved

    and even ewer are oered or sale in the market.

    This policy confict has led to trade disputes and

    unquestionably slowed the global introduction o

    agricultura l biotechnology.

    Could the same divergence pattern emerge with

    synthetic biology? Early analyses o press cover-age o synthetic biology in the United States and

    the European Union have shown a more pre-

    cautionary raming in Europe with a ocus on

    a much wider range o potential risks (Pauwels

    & Irim, 2008). For example, U.S. news stories

    were more likely than European news stories to

    ocus on potential benets o synthetic biology.

    Federa reuatrs chared

    with respnsibiity r

    prtectin pubic heath and

    the envirnment rapped with

    appyin existin aws t new

    bitechny prducts.

  • 8/14/2019 Woodrow Wilson Center - Sloan - Hastings - Venter - Nano_synbio2_electronic_final

    20/57

    15

    C. Synthetic Biy Future: The Reevance BitechnyReuatin t Synthetic Biy

    In many ways, the current status o synthetic bi-

    ology can be roughly compared to the situation

    acing molecular biologists in the mid-1970s. Syn-

    thetic biology remains a loosely conederated set o

    technologies and disciplines, although its potential

    power has been amply demonstrated. Much o the

    ongoing work is at the undamental research level,

    as scientists continue to try to understand how to

    design synthetic genetic constructs and to synthe-

    size larger sequences o DNA. How quickly this sci-

    ence will advance is dicult to predict. Designingsynthetic microorganisms may turn out to be much

    more dicult than anticipated (Aldr ich, Newcomb,

    & Carlson, 2008). On the other hand, given the

    recent history o unexpected developments in the

    biological sciences, it is possible that progress could

    be quite rapid and that products could be heading to

    the marketplace in the not-too-distant uture.

    Given the status o synthetic biology, are the poli-cies and approaches developed over the past two

    decades to address similar concerns about rDNA

    technology appropriate to apply to synthetic bi-

    ology research and commercialization? To what

    degree, i any, do the guidelines and regulations

    developed or rDNA technology apply to syn-

    thetic biology research and commercialization?

    In examining those questions, this report will o-

    cus primarily on the potential risks to the public

    health and the environment o an accidental release

    o a harmul synthetic microorganism, and on the

    health and environmental impacts o synthetic mi-

    croorganisms intended or non-contained uses in

    the environmentthe same concerns expressed

    in the early development o rDNA biotechnology.

    To be sure, synthetic biology raises other signi-

    cant concerns. The issue o biosecurity has already

    received signicant debate, particularly in the aca-demic and deense communities. It is not the intent

    o this report to revisit those issues (National Science

    Advisory Board or Biosecurity, 2006; National

    Research Council, 2004; Garnkel, Endy, Epstein,

    & Friedman, 2007). Synthetic biology also raises

    signicant ethical, religious and social impact issues

    (Balmer & Martin, 2008). When the rst reproduc-

    ing synthetic organism is created at some point in

    the uture, it will inevitably rekindle the controversyover the propriety o creating lie previously raised

    by some rDNA biotechnology applications. Issues

    relating to patents and intellectual property are also

    likely to be controversial and complex. While all

    these issues are clearly signicant and will have ma-

    jor implications or the uture trajectory o synthetic

    biology, they are beyond the scope o this study.

    iven the recent histry

    unexpected devepments in the

    biica sciences, it is pssibe

    that prress cud be quite

    rapid and that prducts cud

    be headin t the marketpace

    in the nt-t-distant uture.

  • 8/14/2019 Woodrow Wilson Center - Sloan - Hastings - Venter - Nano_synbio2_electronic_final

    21/57

  • 8/14/2019 Woodrow Wilson Center - Sloan - Hastings - Venter - Nano_synbio2_electronic_final

    22/57

    17

    synthetic biology that covers all the activities currently

    being carried out under that title. The Royal Society

    has dened it as an emerging area o research that

    can broadly be described as the design and construc-

    tion o novel articial biological pathways, organisms

    or devices, or the redesign o existing natural biologi-

    cal systems (The Royal Society, 2008). One writer

    attempted to summarize it as the area o intersection

    o biology and engineering that is ocused on the

    design and abrication o biological components and

    systems that do not already exist in the natural world,

    and the redesign and abrication o existing biologi-

    cal systems (Bhutkar, 2005). One group summed

    up the variety o activities with the observation that

    synthetic biology is the engineering o biology: the

    synthesis o complex, biologically based (or inspired)

    systems, which display unctions that do not exist in

    nature. This engineering perspective may be applied

    at all levels o the hierarchy o biological structures

    rom individual molecules to whole cells, tissues and

    organisms. In essence, synthetic biology will enable

    the design o biological systems in a rational and

    systematic way (European Commission, 2005).

    Perhaps a better way to understand the emerging dis-

    cipline o synthetic biology is to look at some examples

    o current research. Craig Venter, the scientist who

    raced the government-sponsored Human Genome

    Project with a novel sequencing method, is leading

    several research initiatives. At the Institute or Genomic

    Research (now part o the J. Craig Venter Institute),

    researchers have become interested in determining

    the minimal set o genes required to support lie.

    Working with the M. genitalium bacterium, an organ-

    ism with one o the smallest genomes consisting o

    only 517 genes, researchers were able to reduce the

    number o genes to a core set o between 265 to 350

    genes that still enabled the bacterium to sustain lie.

    Beyond its purpose in helping understand the unctions

    o genes, part o the motivation or this research is the

    concept o creating a small, fexible and universal bac-

    terial platorm that could be modied with dierent

    gene packages to carry out dierent unctionssuch

    as producing drugs or industrial chemicals.

    Eorts to build whole-length genomes rom scratch,

    using genomic-sequence inormation, have been go-

    ing on or some time. In 2002, a team o researchers

    made headlines or assembling an inectious poliovirus

    directly rom nucleic acids in the laboratory (Cello,

    Paul, & Wimmer, 2002). In the ollowing year, re-

    searchers at the Venter Institute succeeded in con-

    structing the genome o a similar-length virus in only

    two weeksin contrast to the year it took to assemble

    the poliovirus (Smith, Hutchinson III, Pannkoch, &

    Venter, 2003). In 2005, scientists reconstructed the

    genome o the 1918 strain o infuenza fu virus, usingsamples o DNA taken rom rozen cells o victims to

    generate a genetic sequence to copy (Tumpey, et al.,

    2005). These studies launched a signicant debate

    about the biosecurity implications o sequencing and

    synthesizing inectious and pathogenic agents.

    More recently, in February 2008, researchers at

    the Venter Institute announced the largest synthe-

    sized whole genome to datethe nearly 600,000

    base-pair-long genome oM. genitalium. Evidencing

    the continuing acceleration o genetic sequencing

    and synthesizing technologies, the M. genitalium ge-

    nome was an order o magnitude larger than any pre-

    viously synthesized DNA product (Casci, 2008).

    An example o the construction category o synthetic

    biology is provided by Drew Endy (now at Stanord)

    and his ormer colleagues at the Massachusetts Institute

    o Technology (MIT), who have established the Bio-

    bricks Foundation (http://bb.openwetware.org/), a

    non-prot organization that is attempting to create an

    open catalog o standardized DNA parts that encode

    basic biological unctions, such as a switch that turns

    gene expression on or o. Based on the open-source

    sotware philosophy, these BioBrick parts are made

    reely available or researchers around the world. Each

    year, the oundation supports the International Ge-

    netically Engineered Machine competition in which

    undergraduate student teams compete to construct

    novel biological machines using BioBrick standard

    parts (www.2008.igem.org). In 2007, entries included

    bacteria that mimic the behavior and property o red

    blood cells, inector detector organisms that detectedantibiotic resistant microbes and a bacterial-based pho-

    tographic imaging system (Lichtenstein, 2007).

    Other research that comes under the umbrella o

    synthetic biology includes eorts to create synthetic

    DNADNA that is not limited to the naturally

    occurr ing base pair combinations o A-T, G-C. Ex-

    panding the genetic alphabet by creating novel

    chemical base pairs could be useul or any number

  • 8/14/2019 Woodrow Wilson Center - Sloan - Hastings - Venter - Nano_synbio2_electronic_final

    23/57

    18

    Synthetic

    Bio

    lo

    gy

    Pro

    ject

    /

    ne

    wl

    ife,

    old

    BottleS:regulating

    firSt-

    generation

    ProductS

    ofSynth

    etic

    Biology

    B. Ptentia Appicatins

    Despite these scientic breakthroughs, synthetic bi-

    ology or the most part remains at the basic research

    stage. Most o the unding or synthetic biology work

    comes rom the public sector, although venture capi-

    tal appears to be slowly increasing, particularly in

    the area o biouels, discussed in more detail below

    (International Risk Governance Council, 2008;

    Aldrich, Newcomb, & Carlson, 2008). With some

    o the exceptions noted below, most observers do

    not expect commercial applications to arise rom

    synthetic biology or another decade. However,

    as is always the case with technology, unoreseen

    breakthroughs could enable more rapid technology

    development than currently expected. Given the

    current state o the science, several observers have

    suggested that it i s quite conceivable that in 10 years

    we will be able to ully redesign or make new cells,

    bacteria or viruses (Serrano, 2007). Craig Venter in

    2004 predicted that engineered cells and lie orms

    would be relatively common within a decade (Fer-

    ber, 2004). Nevertheless, many signicant technical

    hurdles remain (Holt, 2008).

    While the time horizons may be uncertain, researchers

    envision an astonishing array o potential synthetic biol-

    ogy applications: more ecient production o vaccines

    or human and animal health and related diagnostics,

    new and improved drugs, bio-based manuacturing,

    sustainable energy production rom renewable sources

    and bioremediation o environmental contamination

    (Pieper & Reineke, 2000) and biosensors capable o de-

    tecting toxic chemicals (International Risk Governance

    Council, 2008). While similar goals are being pursued

    using conventional technologies, synthetic biology o-

    ers several potential advantages. Synthetic microorgan-

    isms might be capable o producing pharmaceutical or

    industrial compounds that would be very dicult to

    produce using existing chemical or biological tech-

    niques. Further down the line, synthetic biology may

    o purposes, including the potential to penetrate cell

    wells and neutralize undesirable RNA molecules

    (Pollack, 2001; Geddes, 2008). Scientists have al-

    ready developed diagnostic tests that use a rticial

    nucleotides to screen or HIV, cystic brosis and

    other diseases (Benner, 2004). Other eorts are o-

    cusing not just on genetic sequences but on whole

    proto-cells that would create synthetic living cells

    (Szostak, Bartel, & Luisi, 2001; OMalley, Powell,

    Davies, & Calvert, 2007).

    How does synthetic biology dier rom rDNA bio-

    technology? To some extent, synthetic biology is an

    extension o biotechnology; there is a certain amount

    o overlap, and no clear dening line between the

    two areas.5 For example, molecular biology and

    rDNA techniques can also be used to alter genetic

    sequences. However, DNA synthesis technologies

    provide a much more ecient way to achieve the

    same ends, permitting scientists to ocus on novel

    designs unlimited by natural constraints. As one study

    explained, Whereas other recombinant DNA meth-

    ods start with an organisms genome and modiy it

    in various ways, with results that are constrained by

    the original template, synthetic genomics permits

    the construction o any specied DNA sequence,

    enabling the synthesis o genes or entire genomes

    (Garnkel, Endy, Epstein, & Friedman, 2007).

    Because synthetic biology is not limited to us-

    ing existing organi sms, synthetic biology allows

    more complex and sophisticated engineering

    than can be achieved through recombinant DNA

    techniques. Current biotechnology techniques

    generally ocus on modiying components o

    living cells to achieve a desired unction, such as

    splicing a gene rom one organism to another, or

    orcing a mutation in a gene or a specic pur-

    pose. In contrast, synthetic biology is concerned

    with designing and building articial regulatory

    elements into genomes or constructing a com-

    plete genome rom scratch (Bhutkar, 2005). As

    Jay Keasling o the University o Caliornia at

    Berkeley, explains, Were talking about tak ing

    biology and building it or a specic purpose,

    rather than taking exist ing biology and adapting

    it. We dont have to rely on what natures neces-

    sarily created (Pollack, 2006).

  • 8/14/2019 Woodrow Wilson Center - Sloan - Hastings - Venter - Nano_synbio2_electronic_final

    24/57

    19

    even be able to create molecular-sized tools or tissue

    repair and cell regeneration (European Commission,

    2005). Scientists at the Caliornia Institute o Technol-

    ogy are working on synthetic biological switches that

    would reside within a cell and detect and destroy cancer

    (Pollack, 2006). Synthetic biology may enable public

    health ocials to quickly design and produce synthetic

    vaccines in order to respond to rapidly evolving viruses

    (Garnkel, Endy, Epstein, & Friedman, 2007). Ari

    Patrinos o Synthetic Genomics has talked about using

    synthetic genomics to nd the holy grail: microbes

    that would convert carbon dioxide into a eedstock or

    biouels and biochemicals (Patrinos, 2008).

    1. BfuelsWhile most o these applications remain in an indenite

    uture, many believe that the rst potential application

    (the killer app) o synthetic biology may well be in

    the area o biouels (Wade, 2007). Biouels come rom

    renewable resources that can be grown in the United

    States and have the potential to be carbon-neutral, there-

    by serving the twin policy goals o reducing dependence

    on imported oil and reducing the carbon impact o ossil

    uels. Given high energy prices, the environmental andeconomic limitations o producing ethanol rom corn

    and signicantly increased public and private unding or

    R&D o alternative uel sources, researchers are ramping

    up eorts to use synthetic biology to create biouels.

    One area o research interest is the development o

    alternative and improved eedstockssuch as switch-

    grass and other cellulosic biomassto produce biouel.

    The major technical limitation with such eedstocks

    is that they typically have dense cell structures that

    must be broken down to yield the sugars rom which

    biouels are madea process that is in itsel energy

    intensive. To make the biouel process more energy

    ecient, and thereore more economical and environ-

    mentally sustainable, scientists are using biotechnology

    and synthetic biology tools to look at several points

    in the biouel process where biology could make a

    signicant dierence. One area o interest is in devel-

    oping a microbe with the ability to both extract the

    sugars rom cellulosic biomass and to convert those

    sugars to uel, consolidating the separate biological

    processes and thereby reducing the costs o extraction

    (Lynd, van Zyl, McBride, & Laser, 2005).

    The most advanced use o synthetic biology to create

    biouels, however, has been in the development o syn-

    thetic microbes that can more eciently convert sugars

    directly to uels that are directly compatible with the

    range o uels currently used (i.e., gasoline, diesel, jet

    uel). Several companies have small-scale pilot projects

    that have demonstrated technical easibility, but scal-

    ing up to produce industrial quantities o biouels at acompetitive price remains a signicant challenge.

    While it is dicult to say how close any o these

    products may be to being commercialized, at least a

    hal-dozen companies are developing products in this

    area, and several claim to have products or processes

    that are close to testing on larger scales. Whether all o

    these microorganisms can be considered products o

    synthetic biology or simply advanced biotechnology

    is not always clear; or the most part, the companies

    listed below have claimed that they are using synthetic

    biology techniques. A non-exhaustive illustrative list

    o these companies activities are noted below.

    LS9(www.ls9.com), a company located in South SanFrancisco and ounded by Harvard Medical School

    proessor o genetics George Church, is developing a

    proprietary microbe through synthetic biology to en-

    able the development o a variety o products that will

    be directly comparable to existing uels derived rom

    oil, such as gasoline, diesel and jet uel. Starting with

    eedstocks such as sugarcane and cellulosic biomass,

    these synthetic organisms convert sugars directly intohydrocarbons more eciently than current methods.

    In September, 2008, LS9 opened a pilot plant to test

    this technology with the goal o a constructing a

    50,000- to 100,000-gallon production acility by

    2011 to produce a replacement or diesel uel.

    Ars(www.amyris.com) is a Caliornia startupcompany using synthetic biology to develop engineered

    microbes to produce high-value compounds, includ-ing renewable biouels. Like LS9, Amyris is looking

    to use its proprietary microbes to produce diesel rom

    sugarcane stock. According to Amyris, the new biouel

    process should achieve lower costs and greater scale than

    vegetable oil-based biodiesel. In 2008, Amyris signed

    an agreement with Crystalsev, one o Brazils largest

    ethanol distributors and marketers, to begin scaling

    up or commercialization in 2010. The joint project

  • 8/14/2019 Woodrow Wilson Center - Sloan - Hastings - Venter - Nano_synbio2_electronic_final

    25/57

    20

    Synthetic

    Bio

    lo

    gy

    Pro

    ject

    /

    ne

    wl

    ife,

    old

    BottleS:regulating

    firSt-

    generation

    ProductS

    ofSynth

    etic

    Biology

    predicts being able to produce 30 million gallons o

    diesel as early as 2010, with gasoline and jet uel produc-

    tion ollowing within one to two years.

    oPX Btecnlges(www.opxbiotechnologies.com),located in Boulder Colorado, uses synthetic biol-ogy to design custom organisms in biouel production to

    reduce production costs. In addition to its engineering ca-

    pability, OPX is using a search technology platorm to scan

    genomes and identiy potentially useul gene sequences,

    enabling the testing and engineering o microbes 1,000

    to 5,000 times aster than conventional methods, accord-

    ing to the company. The company states, Our ability to

    understand rapidly the workings o microbes at the indi-

    vidual gene level and test a huge number o modicationssimultaneously enables us to engineer new microbes that

    can provide major improvements in tolerance, productiv-

    ity, and specicity or uel and chemical production.

    Slae(www.solazyme.com), another South SanFrancisco rm, is using a patented process to make biod-

    iesel rom genetically modied marine algae. The uel,

    named Soladiesel, is being road-tested in Caliornia, and

    the company expects to be producing commercial quan-tities in several years. Solazyme is also working on other

    synthetic biology applications. The company promotes its

    expertise in automated directed evolution (i.e., screening

    mutated organisms or desirable unctions), optimizing

    production strains and metabolic engineering.

    Ge (www.gevo.com), located in Denver, has the

    goal o developing new cellulase genes, testing them

    in mixtures o enzymes and then engineering those

    genes into bacteria that wil l eciently convert sugars

    into butanol and isobutanol at costs comparable to

    those o current ethanol production.

    Sntetc Gencs(www.syntheticgenomics.com), ounded by Craig Venter, may have the most

    ambitious R&D plans. The company is pursuing

    paths similar to those o the companies above, search-

    ing or and engineering microorganisms that directly

    convert eedstocks (such as sugar and cellulose) into

    biouels. The company recently predicted that a pilot-

    scale project or liquid biouels would be operating

    within two years, with large-scale production by

    2013. In addition, Synthetic Genomics is lookingmore broadly at the renewable-uel process, includ-

    ing the genetic modication o eedstocks to increase

    yields in sugars and oils and potentially enhancing soil

    microbes to improve eedstock perormance (Patri-

    nos, 2008). In addition, the company has partnered

    with BP to use synthetic genomics or enhancing the

    biological conversion processes or subsurace ossil

    uels, such as oil shale, natural gas, oil and coal.

    2. Paraceutcals

    Just as genetic engineers used the tools o recombinant

    DNA to develop engineered bacteria to produce in-

    sulin and other valuable drugs and chemicals, scientists

    are using the more advanced tool set o synthetic biol-

    ogy or the same purposes. The high value o biophar-

    maceuticals makes this area attractive both to venture

    capital investors and to philanthropic oundations like

    the Bill & Melinda Gates Foundation. At this early

    stage o research, most o the work is being done at

    universities and university-based startup companies,

    rather than at large pharmaceutical companies.

    One area o research involves engineering the meta-

    bolic pathways o microorganisms to dramatical-

    ly increase the production o terpenoids, a class o

    molecules with wide-ranging pharmaceutical ap-

    plications, including anti-cancer and anti-malarial

    properties (Ajikumar, Tyo, Carlsen, Mucha, Phon,

    & Stephanopoulos, 2008). Jay Keasling, at the Uni-

    versity o Cal iornia, Berkeley, published work in

    2006 demonstrating the modication o a yeast to

    produce artemisinic acid, a precursor o artemisinin,a highly eective drug against malaria (Ro et al.,

    2006). Artemisinin is currently derived rom the

    sweet woodworm plant, but is expensive and in short

    supply.6 Keaslings process is being ur ther developed

    to optimize yield and increase scale o production by

    Amyris, the Caliornia synthetic biology company

    with which Keasling is associated. Amyris, which is

    being supported in this eort by the Bill &Melinda

    Gates Foundation, has indicated that it will take noprots rom this technology. (Keasling is using a simi-

    lar platorm in his or-prot biouel work.) In March

    2008, Amyris announced that it had partnered with

    the Institute or OneWorld Health, a U.S.-based non-

    prot pharmaceutical company, and the pharmaceu-

    tical company Sano-Aventis, or the development

    and commercialization o synthetic artemisinin, i

    they can achieve certain technological benchmarks.

  • 8/14/2019 Woodrow Wilson Center - Sloan - Hastings - Venter - Nano_synbio2_electronic_final

    26/57

  • 8/14/2019 Woodrow Wilson Center - Sloan - Hastings - Venter - Nano_synbio2_electronic_final

    27/57

    22

    Synthetic

    Bio

    lo

    gy

    Pro

    ject

    /

    ne

    wl

    ife,

    old

    BottleS:regulatingfi

    rSt-

    generation

    ProductS

    ofSynth

    etic

    Biology

    be sold until the appropriate regulatory agency has

    ound that they are sae, based on evidence submit-

    ted by the developer.

    Whether a new technology is ramed as presump-

    tively risky or sae has signicant implications, not

    only or the protection o public health and the

    environment but also or its commercialization.

    Laws and regulations that require a mandatory

    pre-market saety-approval process may provide a

    higher level o protection and precaution, but at the

    cost o an expensive, lengthy and oten-uncertain

    regulatory process. Typically, the developer needs

    to provide the agency with the inormation it needs

    to determine that the product is sae. That may in-volve years o testing to meet strict agency protocols

    or addressing various concerns. As a consequence,

    mandatory pre-market approval approaches create a

    airly high barrier to entry to new products, thereby

    conficting with the policy goal o encouraging

    the introduction o valuable new products to the

    marketplace. This confict is particularly apparent

    in the cases where a new technology, though not

    without some risk, appears to be signicantly saer

    than a product already on the market. (At the same

    time, having regulatory approval provides an eco-

    nomic benet to the developer by helping ensure

    market and consumer condence in the saety o

    the new product.)

    On the other hand, allowing a new technology to

    come to market more quickly, without a pre-mar-

    ket saety-approval process, increases the chance

    that some harmul product will be missed by

    regulators. Balancing the confict between these

    two policy goalsprotecting public health and

    the environment on the one hand and encour-

    aging valuable and innovative new products on

    the otheris a well-recognized challenge. The

    history o FDA drug regulation provides ample

    examples where the FDA has been roundly criti-

    cized or dragging its heels in approving helpul

    new drugs in some years, and then pilloried or

    recklessly approving dangerous drugs in other

    years. Policymakers need to balance the desire

    to avoid over-regulation on one handthat is,

    keeping truly beneicial sae products o the

    marketwith a desire not to under-regulatethat is, allowing a tru ly harmul product onto

    the market. This is the traditional Goldilocks

    dilemma: determining how to impose only those

    regulatory controls and costs that are necessary to

    match the actual risks o a product.

    When they have the legal fexibility to do so, regu-

    lators oten turn to the process o risk assessment to

    help them determine the potential risk o novel prod-

    ucts and new technologies and to tailor appropriate

    risk management controls. While risk assessment in

    theory provides an approach with the potentia l or a

    more nuanced and tailored approach to risk manage-

    ment, it suers rom several limitations. As noted in

    more detail below, risk assessment requires inorma-

    tion, and in many cases inormation about risks o a

    new technology is simply unavailable or uncertain.

    In such cases, the regulatory decision depends upon

    the deault policy assumptions about the inherent

    saety o the technology. In turn, the deault policy

    assumption is shaped by the raming o the new tech-

    nology in relation to existing technologies.9

    For example, in the 1980s, the FDA was aced with

    the decision o whether to regulate oods derived

    rom genetically engineered crops. I genetic engi-

    neering was ramed as a signicant departure rom

    conventional breeding techniques, the FDA could

    have chosen to regulate the new proteins introduced

    into genetically engineered oods as ood additives

    under the Federal Food, Drug, and Cosmetic Act

    (FDCA), thereby triggering a mandatory pre-market

    approval o the ood additives saety. On the otherhand, i genetic engineering was ramed as being

    substantially the same as conventional breeding

    technologies, then the FDA could treat genetically

    engineered oods without a mandatory pre-market

    approvalthe same as any other new variety o po-

    tato or whole ood. With the latter approach, the rel-

    evant risk assessment question would not be whether

    the genetically engineered variety was sae; the ques-

    tion instead would be whether it was as sae as its

    conventionally produced counterpart. The level o

    inormation needed to support a nding o saety

    would have been signicantly more demanding than

    the inormation required to make the assessment that

    a ood was simply as sae as another variety.10 Thus,

    FDAs risk assessment or genetically engineered oods

    depended to a signicant extent on the policy deci-

    sion to treat such oods as being comparable to new

    conventionally produced varieties.

  • 8/14/2019 Woodrow Wilson Center - Sloan - Hastings - Venter - Nano_synbio2_electronic_final

    28/57

    23

    B. Synthetic Biy: Framin and Risk Characterizatin

    The initial raming question is whether the haz-

    ards posed by synthetic biology are similar to

    or qualitatively dierent rom those posed by

    rDNA engineering or other genetic engineer-

    ing techniques. Scientists h ave long argued that

    genetic engineering poses no unique environ-

    mental or public health risks, and that thereore

    the relevant regulatory question is the risk o

    the nal product, not o how it was produced.

    Similarly, synthetic biology researchers argue

    that synthetic biologyparticularly in its cur-

    rent state o developmentis just an extension o

    rDNA and other genetic engineering techniques.

    Synthetic biology acil itates the manipulation o

    the structure o genetic elements and provides

    researchers with a more ecient means to en-

    gineer organisms. Engineered genetic pathways

    will still be based on naturally occurring com-

    ponents, and the engineered construct must still

    unction within the connes o the biological re-

    quirements o a living organism. In the end, the

    nal productsi.e., engineered organismsare

    similar to t hose produced by other genetic engi-

    neering techniques. As a result, some synthetic

    biology researchers argue that there should be no

    distinction drawn between synthetic biology and

    other genetic engineering techniques.

    As Benner states, Much o what is current-

    ly called synthetic biology is congruent with

    recombinant DNA technology discussed in Asi -

    lomar 30 years ago. This includes bacteria that

    express heterologous genes, proteins in which

    amino acids have been replaced, and cells with

    altered regulatory pathways. Placing a new name

    on an old technology does not create a new haz-

    ard (Benner & Sismour, 2005).

    The emphasis on the continuity with past technol-

    ogy is a ami liar pattern in the raming o a new

    technology. Similar arguments were made both

    with rDNA technology and nanotechnology.11

    The not new raming then becomes an argu-

    ment or maintaining that existing regulations are

    sucient to deal with the new technology.

    Future developments in synthetic biology, how-

    ever, could alter that view. Synthetic biology

    is likely to be not only a more ecient genetic

    engineering technology but also a means to

    engineer much more complex genetic modi-

    ications than can be accomplished through

    standard genetic engineering techniques. In

    addition, synthetic biology may enable the

    modications o organisms with genetic ele-

    ments designed rom scratch that could have

    properties that are quite dierent rom those

    that can be created through todays genetic

    engineering techniques. How ar natural

    biologic limits can be stretched remains to be

    seen and is indeed a major ocus o synthetic

    biology research. It is, o course, the very di -

    erence between synthetic biology and other

    genetic engineering techniques that makes its

    anticipated novel applications possible.

    While synthetic biology provides more powerul

    tools or genetic engineering, there is no basis to

    assume that the novelty o the process itsel poses

    new or enhanced risks. Instead, the kinds o ge-

    netically engineered products that are likely to

    be produced using synthetic biology are similar

    to those produced through other direct genetic

    engineering and conventional breeding tech-

    niques. The more relevant regulatory question,

    then, is whether the novel engineered organisms

    created through synthetic biology are likely to

    present new or enhanced risks compared to those

    o other genetic engineering techniques.

    Most scientists believe that the biosaety risks o

    synthetic biology products are the same ki nds

    o risks presented by products o other genetic

    engineering. For example, Serrano states that

    the risks associated with the accidental release

    o synthetic biology products are in act simi-

    lar to the current biosaety problems associated

    with genetically modied crops, the use o en-

    gineered microorganisms to enhance production

    o desired targets etc. (Serrano, 2007).

  • 8/14/2019 Woodrow Wilson Center - Sloan - Hastings - Venter - Nano_synbio2_electronic_final

    29/57

    24

    Synthetic

    Bio

    lo

    gy

    Pro

    ject

    /

    ne

    wl

    ife,

    old

    BottleS:regulatingfirSt-

    generation

    ProductS

    ofSynth

    etic

    Biology

    What are the risks o genetically engineered

    organisms? Are organisms created through syn-

    thetic biology likely to pose dierent risks or a

    dierent level o risk? What are the risks associ-

    ated with the likely rst generation o synthetic

    biology products, such as synthetic microorgan-

    isms used to produce biouels, industria l chemi-

    cals and pharmaceuticals?

    1. Accdental Release Rsk Assessent

    The rst ri sk scenario involves the accidental re-

    lease o a synthetic microorganism12 rom a labo-

    ratory or other contained environment, such as a

    commercial bioreactor. Because such organisms

    are potential ly capable o reproduction, evolutionand spread through the environment, the risks o

    synthetic microorganisms, like other genetically

    engineered microorganisms in general, are di-

    erent rom those o conventional chemicals. I a

    synthetic microorganism is inectious, pathogen-

    ic, toxic or capable o reproduction, an accidenta l

    release could pose a risk to laboratory workers,

    the health o the adjacent communities, and the

    environment (Tucker & Zilinskas, 2006).

    This issue is especially important or synthetic

    biology since the applications likely to emerge

    in the near uture are microorganisms that are

    intended or contained use, either in academic

    or industrial research laboratories, or as part o

    a closed-end industrial production process to

    produce a nal, oten conventional, industrial

    or pharmaceutical chemical. Since these micro-

    organisms will not be intended or use outside

    o a contained production acility, it will be im-

    portant to assess the risks associated with an ac-

    cidental release rom such contained acilities.

    An initial consideration in assessing the risk i s the

    probability o a synthetic microorganism being

    able to reproduce and spread should it e scape the

    contained environment. Some biological scientists

    assume that accidentally released synthetic micro-

    organisms will pose a minimal risk because they are

    unlikely to surv ive in the natural environment.

    The more dierent an articial living system isrom natural biological systems, the less likely

    it is that the articial system wil l survive in the

    natural world The 30 years o experience

    with genetically altered organisms since Asilo-

    mar have indicated that virtually any human-

    engineered organism is less t than its natur al

    counterpart in the natural environment. I they

    survive at all in the environment, they do so

    either under the nurturing o an attentive hu-

    man, or by ejecting their engineered eatures(Benner & Sismour, 2005).

    Other scientists are less condent about the abil-

    ity to predict the survival and spread o synthetic

    microorganisms, particul arly more complex or-

    ganisms l ikely to be developed in the longer term.

    Near-term products, derived rom well-under-

    stood bacterial hosts and natural genetic sequences,

    other scientists are ess

    cnfdent abut the abiity t

    predict the surviva and spread

    synthetic micrranisms,

    particuary mre cmpex

    ranisms ikey t be

    deveped in the ner term.

  • 8/14/2019 Woodrow Wilson Center - Sloan - Hastings - Venter - Nano_synbio2_electronic_final

    30/57

    25

    are likely to be comparable in risk to currently pro-

    duced genetically engineered organisms. However,

    uture synthetic organisms created rom scratch

    will lack a clear genetic pedigree and could have

    emergent properties ar ising rom the complex

    interactions o its constituent genes. Accordingly,

    the risks attending the accidental release o such

    an organism rom the laboratory would be ex-

    tremely dicult to assess in advance, including

    its possible spread into new ecological niches and

    the evolution o novel and potentially harmul

    characteristics(Tucker & Zilinska s, 2006).

    The potential uture ability to construct organ-

    isms containing articial DNA with non-con-ventional base pairs also ra ises questions about the

    ability o such organisms to survive, reproduce

    and spread i accidentally released. Some scien-

    tists argue that such organisms would be highly

    unlikely to surv ive. [I ] a completely synthetic

    lie orm ... has eight nucleotides in its genetic

    alphabet, [it] would nd survival very dicult

    i it were to escape rom the laboratory. What

    would it eat? Where would it get its unnatural

    nucleosides? (Benner & Sismour, 2005).

    A second element o a risk assessment is deter-

    mining the hazard should an organism be acci-

    dentally released, become established, reproduce

    and spread. Not all engineered microorganisms

    would pose a health or an environmental risk

    i there was an accidental release. With rDNA

    molecular research, as with microbiological

    research in general, risk is assessed largely on

    the underlying risk o the donor or host organ-

    isms: or example, known pathogens obviously

    pose greater risk i released than benign organ-

    isms.13 As a consequence, the NIH Guidelines

    or Research Involving Recombinant DNA

    Molecules (discussed in more detail below) re-

    quire containment measures to be proportionate

    to the risk characterist ics o the host or donor

    organisms. Organisms known to be extremely

    dangerous must be handled in the highest-level

    biosaety connement laboratories. Thus the

    probability o a harmul accidental release is

    reduced by biosaety management practices in-tended to ensure containment and prevent the

    spread o dangerous inectious agents. While

    there have been rare reported incidents o harm-

    ul accidental releases o dangerous microbio-

    logical agents rom laboratories,14 the long and

    generally sae record o research laboratories

    in handling k nown dangerous agents should

    provide assurance that researchers have the ca-

    pability to protect workers and the surrounding

    community rom dangerous microorganisms,

    engineered or naturally occurring.15

    2. intentnal Nn-cntaned Use

    The second risk scenario involves the poten-

    tial health and environmental risks associated

    with a synthetic organism that ha s been designed

    or use in a non-contained setting. Examples

    include the use o synthetic microorganisms in

    ermentation ponds used or industrial chemical

    production, or applications such as microbial

    pesticides, bioprocessing agents to help seques-

    ter or capture carbon or bioremediation agents

    that would require use in the open environ-

    ment. Unlike microorganisms intended solely

    or contained use, synthetic organisms intended

    or non-contained use will be specically engi-

    neered to survive and unction in the environ-

    ment into which they are being released. As a

    result, they are more likely to be t or surviva l

    and competition in the natural environment

    than organisms intended solely or contained

    use, making the r isk o reproduction, spread andevolution more probable.

    The potential environmental concerns about

    such synthetic microorganisms all into sever-

    al categories. One concern is that a synthetic

    microorganism designed or a particular task

    could interact with naturally occurring organ-

    isms and adversely aect the environment. This

    could occur i the synthetic organism inects or

    displaces existing organisms (including plants

    and animals), or otherwise intereres with the

    existing balance o the ecosystem into which

    it was released. I the synthetic organism es-

    tablishes itsel in an ecological niche, it might

    become diicult to eradicate. There is also a

    potential risk that some o the synthetic genetic

    traits could be spread through gene fow to other

  • 8/14/2019 Woodrow Wilson Center - Sloan - Hastings - Venter - Nano_synbio2_electronic_final

    31/57

    26

    Synthetic

    Bio

    lo

    gy

    Pro

    ject

    /new

    life,

    old

    BottleS:regulatingfirSt-

    generation

    ProductS

    ofSynthetic

    Biology

    natural microorganisms, resulting in the spread

    o unwanted traits or the inclusion o articial

    genetic sequences in related organisms, i the

    trait provides a tness advantage (Bhutkar, 2005;

    Tucker & Zilinskas , 2006).

    In addition, the propensity o microorganisms

    to evolve when placed in an environment with

    multiple selective pressures creates problems.

    For synthetic biology engineers, the challenge

    is to nd ways to prevent the microorganisms

    rom evolving and potentially losing their en-

    gineered trait: ater all, engineers want their

    inventions to remain stable and to continue to

    unction as designed over many generations. Forrisk assessors, the potential or microorganisms

    to evolve creates additional uncertainties, since

    the pathway o evolution is dicult to predict.

    It is one thing to assess the environmental risk

    o the organism as designed, but quite another to

    try to predict what the organism could become

    many generations hence. Thus, developing ways

    to prevent the unwanted evolution o synthetic

    microorganisms is a challenge both or engineers

    and or risk regulators.

    As with saety practices or rDNA molecules in

    laboratories, regulators have signicant experi-

    ence with assessing the risks o genetically engi-

    neered organisms intended or release into the

    environment. Over the last 25 years, USDA and

    EPA have reviewed and approved thousands o

    applications or eld trials or experimental ge-

    netically modied plants and microorganisms.

    The type o review depends on the specic prod-

    uct and its intended use, but typically agencies

    assess such potential risks as toxicity, potential

    invasiveness, impacts on other organisms (in-

    sects, plants and animals) and the potential or

    unwanted gene fow to wild relatives. The risk

    assessment is based on a amiliar ity with the char-

    acteristics o host and donor organisms and vec-

    tors, consideration o the specic environment

    into which the organism is intended to be used

    and other actors. On the basis o the risk asse ss-

    ment, agencies typically impose restrictions oneld trials o genetically engineered organisms to

    prevent their unintended spread and to minimize

    pot