Virus English

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    What is a virus?, What are its properties?

    Viruses are disease-causing agentsThey are obligate parasites in their hosts

    They are not sufficient to be called as a cell

    They show living properties when interaction with theirhosts occur

    They can replicate while infecting their hosts

    Their size is so tiny (Much smaller than smallestbacterial cells)

    Generally, they cannot be killed by using antibiotics

    Their genetic materials either in the form of DNA or RNA(They never have both)

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    Viral components

    Main components of a virus: Nucleic acids (genetic materials) Mantel Protein often called as caspid

    Bilayer membrane called Envelope

    Nucleic acids The genetic materials of a virus can be either

    DNA or RNA This can be double stranded or single

    stranded

    Linier or circular, sometimes segmented

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    Viral components (cont )

    Caspid

    This component surround the geneticmaterials

    The main function is to protect geneticmaterials and to provide the virus with specificmorphology

    Caspid mediate or facilitate the attachment ofa virus to its hosts

    Consists of one or more viral specific proteins

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    Size and morphology of viruses

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    Host range and host specificity (Cont )

    Host specificity Type of specific cells that can be infected by avirus

    Example 1 Virus Wart: can only infect cells of skin

    Example 2 Megalovirus can infect salivary glandcells, digestive tract cells, Cells of lungs, heart, andother organs

    Host specificity is determined by the ability ofa virus to attach to its hosts

    This is also determined by the availability ofenzymes in its host needed by the virusduring its replication processes

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    Stages of the replication of viruses

    Generally, there are 5 stages required byviruses to complete their life cycle

    (replication process): Adsorption

    Penetration

    Synthesis of viral components Maturation process

    Bursting or release

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    Replication process of T4 virus (Bacteriophage)

    T4 virus is an obligate parasite in E. coli

    Its genetic material is a double stranded DNA

    Firstly discovered by Frederic Twort in 1915

    Its body consists of head, collar, and tail

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    Adsorption of T4 virus in E. coli

    Initiated by attachment of the tailcomponent on the surface of host cell (E.coli)

    This attachment occurs at the specificreceptor on the surface of host cells

    This receptor is a specific protein

    recognized by the viral protein forattachment

    Part of the virus that recognize the hostsprotein is called the recognition factor

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    Penetration of T4 virus to E. coli

    The virus releases lysozyme to degradethe cell wall of the bacterial cells

    The tail of the phage injects the geneticmaterials (DNA) into the host cells

    Other viral components, such as head,collar, and part of its tail remain outside ofthe host cells

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    Maturation of the T4 virus in E. coli

    The head of the virus is assembled from thecaspid protein

    The DNA is wrapped by the head

    Once the head carry sufficient DNA, the activityof the endonuclease will cut the excessive DNA

    Other part of the virus, such as basal, collar, andsheath are assembled on the head part

    The tail fiber will be added at the last step of thematurity

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    Release virus T4 dari sel E. coli

    The virus produces enzyme that can alter themembrane structure of the bacterial cellsThis will make it easier for the virus to cross themembrane of the host

    This is coupled by the activity lyzozyme of phagethat lyse the cell wall of the hostThe Virus is released from the host and ready toinfect other new bacterial cellsThis cycle is called lytic cycleThe time interval (burst time) to complete thecycle is app. between 20-40 munutesThe number of new viruses released (burst time)is: 50 -200 phaga

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    Cultivating viruses of animal origin

    Initially it is difficult to cultivate viruses in vitro,because they obligate parasites

    And then a chicken egg medium is found to beuseful for cultivating viruses (Herpes virus,poxviruses, and influenza causing virus

    Main problem normally arise in this method iscontamination by bacteria and the presence ofegg protein that can interfere the viral growth

    These problems can be overcome by: Application of antibiotics Application of proteolytic enzymes

    This culture is a monolayer matrix

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    Diploid Strain-strain fibroblast

    The most favorable method for cultivatingviruses in vitro

    Cells of fibroblast taken from tissues of a baby

    These cells are able to divide continuously athigh rate

    These cells can be used to cultivate any types of

    virusesThis method is often used in the production ofvaccine, because they contamination-freeculture.

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    Continuous cell line

    These cells are able to perform unlimited

    continuous divisionNormally they are originated from tumor/cancercells

    The most famous example is the HeLa LineThe cells were taken from tumor cells of awoman who suffering from cervix cancer

    This culture has been maintained since 1951 todate

    The culture is easily to get contamination fromother group of Cell Line (the disadvantage)

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    Viruses and teratogene

    Teratogenes are substances or agents that cancause defect on the baby during pregnancySome viruses are known as teratogene, and thecan enter the host through the placentaThere are three types of viruses are known as

    teratogene CMV (Cyto Megallo Viruses) Herpes Symplex type I and II Rubella viruses

    Recently, 1% of birth is infected by CMV,causing infection on nerve and mentalretardation, Some victims also undergo heartmalfunctions and lymph enlargement.

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    Virus and Teratogen (lanjutan..)

    Infection of herpes virus normally occurs justafter giving birth

    Some defects caused by this virus:

    Permanent defect on eyes

    And central nerve system

    Rubella

    Infection occurs in the first 3 moths of pregnancy Can cause deft, defect of touch organs, mental

    retardation, heart and circulatory system malfunction

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    A brief story about HIV/AIDS

    AIDS is caused by HIVThis Virus is predicted to evolve from HIV virusthat infect African macacca (monkey)Scientists hypotheses that HIV firstly associatedwith human around 40 - 100 years agoThis is proved by the presence of antibody HIV1in the blood of a person from Zaire stored since1959Spreading of this virus occurs as a result of

    people migration globally (Development intourism industries)

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    Who can be infected by HIV and how themechanism of infection?

    All people with high risk activities can be infectedby HIVHigh risk activity: Sexual intercourse with many people (infected one) Blood transfusion

    Sharing injection needles (narcotic user)Once infected, the virus will remain in the bodyfor the whole lifeA brief about HIV virus :

    HIV is a retrovirus Its genetic component is RNA The RNA is able to do reverse transcription This RNA has the ability to integrate into the main

    chromosome of the host

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    The mechanism of HIV attack Immune system

    Genetic material of virus incorporate into the DNA of T4(helper) and form new viral replica

    As a result T4 cell decreases in the blood, lymph, andspleen or cannot function to protect our body frominfectionLow titer of T4 cell causing the T8 cells (suppressor) toincrease.

    This result in the ratio of T4:T8 become very low andsuppress the immune systemThe function of T4 cells are to stimulate the B cell toproduce antibodyConsequently, infection is easier to happenBesides that, infected T4 cells will produce solublesuppressor factor that inhibit ceetain immune systemIn this situation, the victims will be very easy to getsecondary deadly infection

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    Diseases associated with AIDS

    Pathogen Disease

    Mycobacterium tuberculosis TBC

    Legionella pneumonia Pneumonia

    Salmonella sp Gastrointestinal diseases

    Herpes viruses Skin and mucus membrane lesion

    Cytomegalovirus Enchepalitis, Penumonia,Candida albicans Mucous membrane and

    esophagus infection

    Cryptococcus neoformans Meningitis

    Histoplasma capsulatum Pneumonia, disseminatedinfections, feverToxoplasma gondii Encephalitis

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    Oncogenes, cancer and role of virus toactivate oncogenes

    Oncogenes This is a latent gene in all human beings

    If it is activated, it can cause cancer/tumor

    In the normal condition, expression of this gene issuppressed by other genes located around theoncogene

    Cancer

    This is an uncontrolled cell division There are two types of tumor:

    Malignant tumor

    Cells composing this tumor are not encapsulated

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    Cancer (Cont ..)

    Cells composing this tumor may detach from its

    origin, enter the blood stream, and grow inother site of the body (Metastasize)

    Remise often occur (the symptom of this tumorsuddenly disappear), due to a certain

    mechanism that stop the expression of DNADNA virus.

    Benign tumor

    Cells composing this tumor are encapsulated It can cause problem if its growth invade other

    organs

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    The role of virus to induce oncogenes

    Some viruses, such as acute transforming retrovirus

    can infect certain normal cells

    The genetic material of this virus is RNA

    With the help of reverse transcriptase, this RNA isreverse transcribed into DNA

    The DNA formed from this process integrates into themain chromosome of the infected cell close to oncogene

    This viral DNA will then activate the oncogen to producecancer protein

    This cancer protein will next function as growth factorthat stimulate cells to continuously divide (infected cellsundergo uncontrolled cell division)

    This leads to the formation of tumor