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The Human Tap Nuclear RNA Factor Contains a Novel T ransportin-dependent Nucl ear Localization Signal T hat Lacks Nuclear Export Signal Function Ray Truant, Yibin Kang, and Bryan R. Cu llen 871602 Shishi’s semin ar 2000,11,16

The Human Tap Nuclear RNA Factor Contains a Novel Transportin-dependent Nuclear Localization Signal That Lacks Nuclear Export Signal Function Ray Truant,

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Page 1: The Human Tap Nuclear RNA Factor Contains a Novel Transportin-dependent Nuclear Localization Signal That Lacks Nuclear Export Signal Function Ray Truant,

The Human Tap Nuclear RNA Factor Contains a Novel Transportin-dependent Nuclear Localization Signal That Lacks Nuclear Ex

port Signal FunctionRay Truant, Yibin Kang, and Bryan R. Cullen

871602

Shishi’s seminar

2000,11,16

Page 2: The Human Tap Nuclear RNA Factor Contains a Novel Transportin-dependent Nuclear Localization Signal That Lacks Nuclear Export Signal Function Ray Truant,

Background:

‧ At least two possible protein mediators of mRNA export exist: heterogeneous nuclear ribonucleoproteins (hnRNPs) and Tap protein.

‧ Definitions of importinαβ , importin β binding domain (IBB) , nuclear localization signal (NLS) , nuclear export signal (NES) , transportin (Trn) , hnRNP A1 and M9 .

‧ M9: NLS/NES Tap-N: NLS

Page 3: The Human Tap Nuclear RNA Factor Contains a Novel Transportin-dependent Nuclear Localization Signal That Lacks Nuclear Export Signal Function Ray Truant,
Page 4: The Human Tap Nuclear RNA Factor Contains a Novel Transportin-dependent Nuclear Localization Signal That Lacks Nuclear Export Signal Function Ray Truant,
Page 5: The Human Tap Nuclear RNA Factor Contains a Novel Transportin-dependent Nuclear Localization Signal That Lacks Nuclear Export Signal Function Ray Truant,
Page 6: The Human Tap Nuclear RNA Factor Contains a Novel Transportin-dependent Nuclear Localization Signal That Lacks Nuclear Export Signal Function Ray Truant,

Background:

‧ At least two possible protein mediators of mRNA export exist: heterogeneous nuclear ribonucleoproteins (hnRNPs) and Tap protein.

‧ Definitions of importinαβ , importin β binding domain (IBB) , nuclear localization signal (NLS) , nuclear export signal (NES) , transportin (Trn) , hnRNP A1 and M9 .

‧ M9: NLS/NES Tap-N: NLS

Page 7: The Human Tap Nuclear RNA Factor Contains a Novel Transportin-dependent Nuclear Localization Signal That Lacks Nuclear Export Signal Function Ray Truant,

‧ Functional domain organization of

human Tap

Page 8: The Human Tap Nuclear RNA Factor Contains a Novel Transportin-dependent Nuclear Localization Signal That Lacks Nuclear Export Signal Function Ray Truant,

Transportin is necessary and sufficient for Tap-N-NLS-dependent nuclear import.

‧Competitive nuclear import assays.

Page 9: The Human Tap Nuclear RNA Factor Contains a Novel Transportin-dependent Nuclear Localization Signal That Lacks Nuclear Export Signal Function Ray Truant,

‧ Transportin is sufficient for Tap-N-NLS-dependent nuclear import.

Page 10: The Human Tap Nuclear RNA Factor Contains a Novel Transportin-dependent Nuclear Localization Signal That Lacks Nuclear Export Signal Function Ray Truant,

Direct binding of the Tap-N-NLS by Trn

‧In vitro binding assays.

Page 11: The Human Tap Nuclear RNA Factor Contains a Novel Transportin-dependent Nuclear Localization Signal That Lacks Nuclear Export Signal Function Ray Truant,

‧Nuclear uptake of the Tap-N-NLS is sequence-specific.

Page 12: The Human Tap Nuclear RNA Factor Contains a Novel Transportin-dependent Nuclear Localization Signal That Lacks Nuclear Export Signal Function Ray Truant,

Functional comparison of M9 and Tap-N-NLS

‧ Heterokaryon fusion nuclear shuttling assay.

Page 13: The Human Tap Nuclear RNA Factor Contains a Novel Transportin-dependent Nuclear Localization Signal That Lacks Nuclear Export Signal Function Ray Truant,

‧HeLa cell microinjection assays.

Page 14: The Human Tap Nuclear RNA Factor Contains a Novel Transportin-dependent Nuclear Localization Signal That Lacks Nuclear Export Signal Function Ray Truant,

Three types of Trn-dependent protein NLS sequences.

‧M9: specific for Trn , NLS/NES .

‧Ribosomal proteins: can also be mediate by Impβ ,NLS , no homology to M9.

‧Tap: no homology to M9 , but specific for Trn , compete with M9 , but lacks NES .Trn nuclear import factor may have evolved a specialized role to the return of mRNA export factors to the nucleus.