35
i REFERENCE 1. Abbade LC, Paiva PDO, Paiva R and Graciano MHP (2010). Growth curve and biochemical analyses of callus of Ipê-Branco (Tabebuia roseo alba (Ridl.) Sand.). Naturalia Rio Claro, 33:45-56. 2. Adams AN (1972). An improved medium for strawberry meristem culture. J. Hortic. Sci. 47: 263-264. 3. Aguinaldo AMA, Turbeville JM, Linford LS, Rivera MC, Garey JR, Raff RA and Lake JA (1997). Evidence for a clade of nematodes, arthropods and other moulting animals. Nature, 387(6632):489-493. 4. Ajithkumar D and Seeni S (1998). Rapid Clonal Multiplication through in vitro Axillary Shoot Proliferation of Aegle mannelos (L.) Corr., a Medicinal Tree. Plant Cell Rep. 17: 422-426. 5. Akiyoshi DE, Morris RO, Hinz R, Mischke BS, Kosuge T, Garfinkel DJ, Gordon MP and Nester EW (1983). Cytokinin/auxin balance in crown gall tumors is regulated by specific loci in the T-DNA. Proc. Natl. Acad. Sci. USA 80: 407-411. 6. Alaey M, Naderi R, Vezvaei A, Khalighi A and Salami A (2005). Comparing study between four different methods of genomic DNA extraction from Cyclamen persicum Mill. Int. J. Agric. Biol. 7: 882-884. 7. Allade P (1971). Étude expérimentale de l'organogenèse axillaire chez Nasturtium officinale R.Br. Comportement de noeuds isolés cultivés in vitro. Compt. Rend. Acad. Sci. Paris 273D: 2079-2082. 8. Al-Samarrai TH and Schmid J (2000). A simple method for extraction of fungal genomic DNA. Lett. Appl. Microbiol. 30: 53-56. 9. Alves A, Crous PW, Correia A and Phillips AJL (2008). Morphological and molecular data reveal cryptic speciation in Lasiodiplodia theobromae . Fungal Divers. 28:1-13. 10. Anand A, Madhavan H, Neelam V and Lily T (2001). Use of polymerase chain reaction in the diagnosis of fungal endophthalmitis. Ophthalmology, 108(2):326-330.

REFERENCE - Shodhganga : a reservoir of Indian …shodhganga.inflibnet.ac.in/bitstream/10603/16107/14/16...v 45. Cai L, Jeewon R and Hyde KD (2006). Phylogenetic investigations of

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REFERENCE

1. Abbade LC, Paiva PDO, Paiva R and Graciano MHP (2010). Growth curve and

biochemical analyses of callus of Ipê-Branco (Tabebuia roseo alba (Ridl.) Sand.).

Naturalia Rio Claro, 33:45-56.

2. Adams AN (1972). An improved medium for strawberry meristem culture. J. Hortic.

Sci. 47: 263-264.

3. Aguinaldo AMA, Turbeville JM, Linford LS, Rivera MC, Garey JR, Raff RA and

Lake JA (1997). Evidence for a clade of nematodes, arthropods and other moulting

animals. Nature, 387(6632):489-493.

4. Ajithkumar D and Seeni S (1998). Rapid Clonal Multiplication through in vitro

Axillary Shoot Proliferation of Aegle mannelos (L.) Corr., a Medicinal Tree. Plant

Cell Rep. 17: 422-426.

5. Akiyoshi DE, Morris RO, Hinz R, Mischke BS, Kosuge T, Garfinkel DJ, Gordon MP

and Nester EW (1983). Cytokinin/auxin balance in crown gall tumors is regulated by

specific loci in the T-DNA. Proc. Natl. Acad. Sci. USA 80: 407-411.

6. Alaey M, Naderi R, Vezvaei A, Khalighi A and Salami A (2005). Comparing study

between four different methods of genomic DNA extraction from Cyclamen persicum

Mill. Int. J. Agric. Biol. 7: 882-884.

7. Allade P (1971). Étude expérimentale de l'organogenèse axillaire chez Nasturtium

officinale R.Br. Comportement de noeuds isolés cultivés in vitro. Compt. Rend. Acad.

Sci. Paris 273D: 2079-2082.

8. Al-Samarrai TH and Schmid J (2000). A simple method for extraction of fungal

genomic DNA. Lett. Appl. Microbiol. 30: 53-56.

9. Alves A, Crous PW, Correia A and Phillips AJL (2008). Morphological and

molecular data reveal cryptic speciation in Lasiodiplodia theobromae. Fungal Divers.

28:1-13.

10. Anand A, Madhavan H, Neelam V and Lily T (2001). Use of polymerase chain

reaction in the diagnosis of fungal endophthalmitis. Ophthalmology, 108(2):326-330.

ii

11. Anderson IC, Campbell CD and Prosser JI (2003). Potential bias of fungal 18S rDNA

and internal transcribed spacer polymerase chain reaction primers for estimating

fungal biodiversity in soil. Environmental Microbiology, 5: 36-47.

12. Antonelli M and Druart PH (1990). The use of brief 2,4-D treatment to induce leaf

regeneration on Prunus canescens Bois. Acta Hortic. 280: 45-50.

13. Arnold AE (2007). Understanding the diversity of foliar endophytic fungi: progress,

challenges, and frontiers. Fungal Biology Reviews. 21:51-66.

14. Arnold AE, Maynard Z and Gilbert GS (2001). Fungal endophytes in dicotyledonous

neotropical trees: patterns of abundance and diversity. Mycological Research,

105:1502-1507.

15. Arnold AE, Henk DA, Eells RL, Lutzoni F and Vilgalys R (2007). Diversity and

phylogenetic affinities of foliar fungal endophytes in loblolly pine inferred by

culturing and environmental PCR. Mycologia, 99: 185-206.

16. Arnold AE, Maynard Z, Gilbert GS, Coley PD and Kursar TA (2000). Are tropical

fungal endophytes hyperdiverse? Ecology Letters 3: 267-274.

17. Arshad M and Frankenberger WT (1991). Microbial production of plant hormones.

Plant Soil 133: 1–8.

18. Azad MAK, Yokota S, Ohkubo T, Andoh Y, Yahara S and Yoshizawa N (2005). In

vitro regeneration of the medicinal woody plant Phellodendron amurense Rupr.

Through excised leaves. Plant Cell Tiss. Orga. Cult. 80: 43-50.

19. Azevedo K (2003). de S. Indução e análises bioquímicas de calos e aspectos as

anatomia foliar de copaíba (Copaifera langsdorffii Desf.). 86 p. Dissertação

(Mestrado em Fisiologia Vegetal) - Universidade Federal de Lavras, MG.

20. Baayen RP, Binants PJM, Verkley G, Carroll GC, van der Aa HA, de Weerdt M, van

Brouwershaven IR, Schutte GC, Maccheroni W jr. and de Blanco CG and Azevedo

JL (2002). Nonpathogenic isolates of the citrus black spot fungus, Guignardia

citricarpa, identified as a cosmopolitan endophyte of woody plants, G. mangiferae

(Phyllosticta capitalensis). Phytopathology 92: 464-477.

21. Balaraju K, Agastin P and Ignacimuthu S (2009) Micropropagation of Swertia chirata

Buch- Hams. Ex Wall: a critically endangered medicinal herb. Acta Physiologia

Plantarum. 31(3): 487-494.

iii

22. Ball EA (1946). Development in sterile culture of stem tips and subjacent regions of

Tropaeolum majus L. and of Lupinus albus L. Am. J. Bot. 33: 301-318.

23. Barrett C and Cassells AC (1994) An evaluation of Xanthomonas compestris pv.

Pelargonii (Brown) from pelargonium x domesticum cv. ‘Gand Slam’ explant in

vitro. Plant Cell, Tissue and Organ Culture 36: 169-175.

24. Belisario A, and Santori A (2009). Gray necrosis of hazelnut fruit: a fungal disease

causing fruit drop. Acta Hortic. 845:501-505.

25. Berger F, Keetley J and Leifert C (1994). An improved surface disinfection method

for shoot explants from Iris rhizomes infected with bacterial soft rot (Erwinia

carotovora). J. Hort. Sci. 69:491-494.

26. Berry DR (1988). Physiology of Industrial Fungi. Blackwell Scientific Publications,

Oxford.

27. Bhagobaty RK and Joshi SR (2009). Promotion of seed germination of Green gram

and Chick pea by Penicillium verruculosum RS7PF, a root endophytic fungus of

Potentilla fulgens L. Advanced Biotech. 6: 16-18.

28. Bhojwani SS, Mullins K and Cohen D (1987). Micropropagation of Feijoa

sellowiana Berg. Acta Hortic. 212: 69-73.

29. Bills GF (1996). Isolation and analysis of endophytic fungal communities from

woody plants. In. S.C. Redlin & L.M. Carris [eds]. Endophytic fungi in grasses and

woody plants: Systematics, ecology, and evolution: 31-65. APS Press, St. Paul, MN.

30. Bills GF and Polishook JD (1992). Recovery of endophytic fungi from

Chameacyparis thyoides. Sydowia 44: 1-12.

31. Biotech Consortium India Limited. Summary report on market survey on tissue

cultured plants. Department of Biotechnology, Government of India and Small,

Farmers’ Agri-Business consortium. http://dbtmicropropagation.nic.in/surveytcp.pdf:

pp.1–14; 2005.

32. Biswas MK, Roy UK, Islam R and Hossain M (2010). Callus culture from leaf blade,

nodal, and runner segments of three strawberry (Fragaria sp.) clones. Turk J Biol. 34:

75-80

33. Blackmon WJ, Reynolds BD and Postek CE (1981). Production of somatic embryos

from callused cantaloupe hypocotyls explants. HortScience 16: 451 (Abst. 381).

iv

34. Blake J (1988). Mites and thrips as bacterial and fungal vectors between plant tissue

cultures. Acta Hortic. 225:163-166.

35. Bolano A, Stinchi S, Preziosi R, Bistoni F, Allegrucci M, Baldelli F, Martini A and

Cardinali G (2001). Rapid methods to extract DNA and RNA from Cryptococcus

neoformans. FEMS Yeast Res.1: 221-224.

36. Borrow A, Brian PW, Chester VE, Curtis PJ, Hemming HG, Henehan C, Jefferys EG,

Llyod PB, Nixon IS, Norris GLF and Radley M (1995). Gibberellic acid a metabolic

product of the fungus Gibberella fujikuroi: some observations on its production and

isolation. J. Sci. Food Agric., 6: 340-348.

37. Borrow A, Brown S, Jeffreys EG, Kessell RHJ, Lloyd EC, Lloyd PB, Rothwell A,

Rothwell B and Swait JC (1964). The kinetics of metabolism of Gibberella fujikuroi

in stirred culture. Canadian Journal of Microbiology 10: 407–414.

38. Boxus Ph and Terzi JM (1988). Control of accidental contaminations during mass

propagation. Acta Hortic. 225: 189-190.

39. Boxus PH (1974). The production of strawberry plants by in vitro micro-propagation.

J. Hortic. Sci. 49: 209-210.

40. Bradbury JF (1970). Isolation and preliminary study of bacteria from plants. Rev.

Plant Pathol. 49:213-218.

41. Bradford MM (1976). A rapid and sensitive method for the quantification of

microgram quantities of protein utilizing the principle of protein-dye binding.

Analytical Biochemistry, New York, 72: 248-254.

42. Buckley NG and Pugh GJ (1971). Auxin production by phylloplane fungi. Nature

231:332.

43. Bush L, Wilkinson HH and Schardl C (1997) Bioprotective alkaloids of grass-fungal

endophyte symbioses. Plant Physiology L.114:1–7.

44. Cai L, Hyde KD, Taylor PWJ, Weir BS, Waller J, Abang MM, Zhang JZ, Yang YL,

Phoulivong S, Liu ZY, Prihastuti H, Shivas RG, McKenzie EHC and Johnston PR

(2009) A polyphasic approach for studying Colletotrichum. Fungal Diversity 39:

183–204.

v

45. Cai L, Jeewon R and Hyde KD (2006). Phylogenetic investigations of Sordariaceae

based on multiple gene sequences and morphology. Mycological Research 110: 137-

150.

46. Cannon PF, Buddie AG and Bridge PD (2008). The typification of Colletotrichum

gloeosporioides. Mycotaxon 104: 189–204.

47. Cannon PF and Simmons CM (2002). Diversity and host preference of leaf

endophytic fungi in the Iwokrama Forest Reserve, Guyana. Mycologia 94: 210-220.

48. Carman JG, Jefferson NE and Campbell WF (1988). Induction of embryogenic

Triticum aestivum L. calli. II. Quantification of organic addenda and other culture

variable effects. Plant Cell Organ Tiss. Cult. 12, 97-110.

49. Carol G (1988). Fungal endophytes in stems and leaves from latent pathogen

mutualistic symbiont. Ecology 69:2–9.

50. Casimiro I, Marchant A, Bhalerao R, Beeckman T, Dhooge S, Swarup R, Graham N,

Inzé D, Sandberg G, Casero P and Bennett MJ (2001). Auxin transport promotes

Arabidopsis lateral root initiation. Plant Cell 13: 843-852.

51. Cassells AC and Doyle BM (2005). Pathogen and biological contamination

management: the road ahead. pp. 35-50 in Loyola- Vargas V.M. & Vázquez-Flota F.

(eds.). Plant Cell Culture Protocols. Humana Press, New York.

52. Cassells AC (2000). Aseptic microhydroponics: a strategy to advance microplant

development. Acta Hortic. 530:187-194.

53. Cassells AC (1997) ed. Pathogen and microbial contamination management in

micropropagation. Dordrecht: Kluwer Academic Publishers; 1997.

54. Centeno ML, Rodriguez A, Feito I and Fernandez B (1996). Relationship between

endogenous auxin and cytokinin levels and morphogenic responses in Actinidia

deliciosa tissue cultures. Plant Cell Rep. 16: 58-62.

55. Chaturvedi HC, Jain M and Kidwai NR (2007). Cloning ofmedicinal plants through

tisuue culture-A review. Indian J Exp Biol 45: 937–948.

56. Cheng M, Jarret RL, Li A, Xing A and Demski JW (1992). Production of fertile

transgenic peanut Arachis hypogaea L. using Agrobacterium tumefaciens. Plant Cell

Rep. 15: 653-657.

vi

57. Chenuil A (2006). Choosing the right molecular genetic markers for studying

biodiversity: from molecular evolution to practical aspects. Genetica 127(1):101-120.

58. Clark CA, Valverde RA, Wilder-Ayers JA and Nelson PE (1990). Fusarium

lateritium, causal agent of sweet potato chlorotic leaf distortion. Phytopathology

80:741-744.

59. Clay K (1988). Fungal endophytes of grasses is a defensive mutualism between plants

and fungi. Ecology 69:10–16.

60. Cline MG (1994). The role of hormones in apical dominance. New approaches to an

old problem in plant development. Physiol. Plant. 90: 230-237.

61. Cohen BA, Amsellem Z, Maor R, Sharon A and Gressel J (2002). Transgenically-

enhanced expression of IAA confers hypervirulence to plant pathogens.

Phytopathology 92:590–596.

62. Comai L and Kosuge T (1982). Cloning and characterization of iaaM, a virulence

determinant of Pseudomonas savastanoi. J. Bacteriol. 149:40–46.

63. Cooke DL, Waites WM and Leifert C (1992). Effect of Agrobacterium tumefaciens,

Erwinia carotovora, Pseudomonas syringae and Xanthomonas campestris on plant

tissue cultures of Aster, Cheiranthus, Delphinium, Iris and Rosa, disease development

in vivo as a result of latent infection in vitro. J. Plant Dis. Protect. 99:469-481.

64. Cooney TP and Nonhebel HM (1991). Biosynthesis of indole-3-acetic acid in tomato

shoots – measurement, mass spectral identification and incorporation of H-2 from

H20-H-2 into indole-3-acetic acid, D-tryptophan and L-tryptophan, indole-3-pyruvate

and tryptamine. Planta 184: 368-376

65. Cooper C, Crowther T, Smith BM, Isaac S and Collin HA (2006). Assessment of the

response of carrot somaclones to Pythium violae, causal agent of cavity spot. Plant

pathol., 55: 427-432.

66. Costacurta A and Vanderleyden J (1995). Synthesis of phytohormones by plant-

associated bacteria. Crit. Rev. Microbiol. 21: 1–18.

67. Crouch JA, Clarke BB, White JW and Hillman BI (2009). Systematic analysis of the

falcate-spored graminicolous Colletotrichum and a description of six new species of

the fungus from warm-season grasses. Mycologia 101: 717–732.

vii

68. Crous PW, Braun U, Schubert K and Groenewald JZ (2007). Delimiting

Cladosporium from morphologically similar genera. Studies in Mycology 58: 33-56.

69. Dalal NV and Rai VR (2004). In vitro propagation of Oroxylum indicum Vent. A

medicinally important forest tree. Journal of Forest Research 9(1): 61-65.

70. Damm U, Baroncelli R, Cai L, Kubo Y, O’Connell R, Weir B, Yoshino K and

Cannon PF (2010). Colletotrichum: species, ecology and interactions IMA Fungus.

1(2): 161–165.

71. Damm U, Woudenberg JHC, Cannon PF and Crous, PW (2009). Colletotrichum

species with curved conidia from herbaceous hosts. Fungal Diversity 39: 45–87.

72. Danby S, Berger F, Howitt DJ, Wilson AR, Dawson S and Leifert C (1994). Fungal

contaminants of Primula, Coffea, Musa and Iris tissue cultures. In: Lumsden, P. J.;

Nicholas, J. R.; Davies, W. J., eds. Physiology, growth and development of plants in

culture. Dordrecht: Kluwer Academic Publishers; 397-403.

73. Davey MR, Fowler MW and Street HE (1971). Cell clones contrasted in growth,

morphology and pigmentation isolated from a callus culture of Atropa belladonna

var. lutea. Phytochem. 10: 2559-2575.

74. Dennis S and Ascher PD (1976). Tissue culture of bulb scale sections for asexual

propagation of Lilium. HortScience 11, 311.

75. Digby J and Skoog F (1966). Cytokinin activation of thiamine biosynthesis in tobacco

callus cultures. Plant Physiol. 41: 647-652.

76. Dodds JH and Roberts LW (1985). Experiments in plant tissue culture (second

edition). Cambridge University Press. pp. 21-35.

77. Dohrmann M, Janussen D, Reitner J, Collins AG, Worheide G (2008). Phylogeny and

Evolution of Glass Sponges (Porifera, Hexactinellida). Systematic Biology,

57(3):388-405.

78. Dougall DK (1966). Biosynthesis of Protein Amino Acids in Plant Tissue Culture II

Further Isotope Competition Experiments Using Protein Amino Acids. Plant

Physiology, 41: 1411-1415.

79. Dow JM and Callow JA (1979). Leakage of electrolytes from isolated leaf mesophyll

cells of tomato induced by glycopeptides from culture filtrates of Fulvia fulva

(Cooke) Ciferri (syn. Cladosporium fulvum). Physiol. Plant Path. 15: 27-34.

viii

80. Dunstan DI, Short KC and Thomas E (1978). The anatomy of secondary

morphogenesis in cultured scutellum tissues of Sorghum bicolor. Protoplasma 97:

251-260.

81. Edlund A, Eklof S, Sundberg B, Moritz T and Sandberg G (1995). A Microscale

Technique for Gas Chromatography-Mass Spectrometry Measurements of Picogram

Amounts of Indole-3-Acetic Acid in Plant Tissues. Plant Physiol. (1995) 108: 1043-

1047.

82. Edwards KL and Goldsmith MHM (1980). pH-dependent accumulation of

indoleacetic acid by corn coleoptile sections. Planta 147: 457-466.

83. Egger KN (1995). Molecular analysis of ectomycorrhizal fungal communities.

Canadian Journal of Botany 73: 1415-1422.

84. Ek M, Ljungquist PO and Stenström E (1983). Indole-3-acetic acid production by

mycorrhizal fungi determined by gas chromatography–mass spectrometry. New

Phytologist 94: 401–407.

85. Elliott RF (1970). Axenic culture of meristem tips of Rosa multiflora. Planta 95, 183-

186.

86. Elzik KM (1985). Symbiotic organism associated with plant part of MAR and non

MAR cotton. Phytopathology 75: 1344–1345.

87. Embong Z, Hitam W, Hazabbah W, Yean CY, Rashid N, Adidin S, Osman S,

Zainuddin ZF and Ravichandran M (2008). Specific detection of fungal pathogens by

18S rRNA gene PCR in microbial keratitis. BMC Ophthalmology, 8:7.

88. Engvild KC (1985). Pollen irradiation and possible gene transfer in Nicotiana species.

Theor. Appl. Genet. 69: 457-461.

89. Entsch B, Letham DS, Parker CW, Summons RE and Gollnow BI (1980).

Metabolites of cytokinins. pp. 109-118 in Skoog (ed.).

90. Espinosa-Garcia FJ and Langenheim JH (1990). The leaf fungal endophytic

community of a coastal redwood population diversity and spatial patterns. New

Phytologist 116: 89-97.

91. Evans PK and Cocking EC (1977). Isolated plant protoplasts. pp. 103-135 in Street

H.E. (ed.).

ix

92. Faisal M, Ahmad N and Anis M (2003). Shoot multiplication in Rauvolfia tetraphylla

L. using thidiazuron. Plant Cell Tiss. Organ. Cult. 80: 187-190.

93. Faisal M, Ahmad N and Anis M (2007). An efficient micropropagation system for

Tylophora indica: an endangered medicinally important plant. Plant Biotechnology

Reports. 1(3): 155-161.

94. Feng K and Linck AJ (1970). Effects of N-1-naphthylphthalamic acid on the growth

and bud formation of tobacco callus grown in vitro. Plant Cell Physiol. 11: 589-598.

95. Field KG, Olsen GJ, Lane DJ, Giovannoni SJ, Ghiselin MT, Raff EC, Pace NR and

Raff RA (1988). Molecular phylogeny of the animal kingdom. Science,

239(4841):748-753.

96. Fisher PJ, Petrini O and Sutton BC (1993). A comparative study of fungal endophytes

in leaves, xylem and bark of Eucalyptus nitens in Australia and England. Sydowia 45:

338-345.

97. Forche E, Kibler R and Neumann KH (1981). The influence of developmental stages

of haploid and diploid callus cultures of Datura innoxia on shoot initiation. Z.

Pflanzenphysiol. 101: 257-262.

98. Forgey WM, Blanco MH and Loegering WQ (1978). Differences in pathological

capabilities and host specificity of Colletotrichum graminicola on Zea mays [maize],

Plant Disease Reporter 62(7):573-576.

99. Friedman R, Altman A and Bachrach U (1985). Polyamines and root formation in

mung bean hypocotyl cuttings. II. Incorporation of precursors into polyamines. Plant

Physiol. 79: 80-83.

100. Friml J (2003). Auxin transport – shaping the plant. Curr. Opin. Plant. Biol. 6: 1-

6.

101. Frohlich J, Hyde KD and Petrini O. (2000). Endophytic fungi associated with

palms. Mycological Research 104: 1202-1212.

102. Gamble JS (1967). (Repr.ed.) Flora of the Presidency of Madras. Vol. 2.

Botanical Survey of India, Calcutta.

103. Ganley RJ, Brunsfeld SJ and Newcombe G (2004). A community of unknown,

endophytic fungi in western white pine. Proceedings of National Academy Sciences

of the United States of America 101: 10107-10112.

x

104. Gao XX, Zhou H, Xu DY, Yu CH, Chen YQ and Qu LH (2005). High diversity

of endophytic fungi from the pharmaceutical plant, Heterosmilax japonica Kunth

revealed by cultivation-independent approach. FEMS Microbiology Letters 249: 255-

266.

105. Gay G and Debaud JC (1987). Genetic study on indole-3-acetic acid production

by ectomycorrhizal Hebeloma species: inter- and intraspecific variability in homo-

and dikaryotic mycelia. Applied Microbiology and Biotechnology 26: 141–146.

106. Gea L, Normand L, Vian B and Gay G (1994). Structural aspects of

ectomycorrhiza of Pinus pinaster (Ait.) Sol. formed by an IAA overproducer mutant

of Hebeloma cylindrosporum Romagnési. New Phytologist 128: 659–670.

107. Geiser DM, Lewis Ivey ML, Hakiza G, Juba JH and Miller SA (2005). Gibberella

xylarioides (anamorph: Fusarium xylarioides), a causative agent of coffee wilt in

Africa, is a previously unrecognized member of the G. fujikuroi species complex.

Mycologia 97:191-201.

108. George EF (2008). Plant Tissue Culture Procedure - Background. In: George E.

F., Hall M. A., De Klerk G.-J. (Eds). Plant propagation by tissue culture, vol. 1,

Springer, The Netherlands: 1-28.

109. George EF and Debergh PC (2008). Micropropagation: Uses and Methods. In:

George E. F., Hall M. A., De Klerk G.-J. (Eds). Plant propagation by tissue culture,

vol. 1, Springer, The Netherlands: 29-64.

110. George EF, PUTTOCK JM and George HJ (1988). Plant culture media:

commentary and analysis. England: Exegetics, 420p.

111. Gerald M, Geetha SP, Sudhakar SR, Raghu AV, Indira B and Ravindran AN

(2006), An efficient micropropagation system for Celastrus paniculatus Willd.: a

vulnerable medicinal plant. J For Res 11: 461–465.

112. Glen M, Tommerup IC, Bougher NL and O'brien PA (2001). Interspecific and

intraspecific variation of ectomycorrhizal fungi associated with Eucalyptus

ecosystems as revealed by ribosomal DNA PCR–RFLP. Mycological Research 105:

843-858.

xi

113. Gomes EA, Barros EG, Kasuya MCM and Araujo EF (1999). Molecular

characterization of Pisolithus spp. isolates by rDNA PCR-RFLP. Mycorrhiza 8: 197-

202.

114. Gonzalez-Mendoza D, Argumedo-Delira R, Morales-Trejo A, Pulido-Herrera A,

Cervantes-Díaz L, Grimaldo-Juarez O and Alarcón A (2010). A rapid method for

isolation of total DNA from pathogenic filamentous plant fungi. Genet. Mol. Res. 9

(1): 162-166.

115. Gonzalez-Mendoza D, Moreno AQ and Zapata-Perez O (2008). An improved

method for the isolation of total RNA from Avicennia germinans leaves. Z.

Naturforsch. C. 63: 124-126.

116. Green CE and Phillips RL (1975). Plant regeneration from tissue cultures of

maize. Crop Sci. 15: 417-427.

117. Gruen HE (1959). Auxins and fungi. Annu. Rev. Plant Physiol. 10:405–440.

118. Guha S and Maheshwari SC (1964) In vitro production of embryos from anthers

of Datura. Nature. 204: 497.

119. Guo LD, Hyde KD and Liew ECY (2000). Identification of endophytic fungi

from Livistona chinensis based on morphology and rDNA sequences. New

Phytologist 147: 617-630.

120. Guo LD, Hyde KD and Liew ECY (1998). A method to promote sporulation in

palm endophytic fungi. Fungal Diversity 1: 109-113.

121. Guo LD, Hyde KD and Liew ECY (2000). Identification of endophytic fungi

from Livistona chinensis based on morphlogy and rDNA sequences. New Phytologist

147: 617-630.

122. Guo LD, Hyde KD and Liew ECY (2001). Detection and taxonomic placement of

endophytic fungi within frond tissues of Livistona chinensis based on rDNA

sequences. Molecular Phylogenetics and Evolution 20: 1-13.

123. Gururaj HB, Giridhar P and Ravishankar GA (2007). Micropropagation of

Tinospora cordifolia (Willd.) Miers ex Hook. F & Thoms: a multipurpose medicinal

plant. Current Science. 92(1):23-26.

124. Haccius B (1978). Question of unicellular origin of zygotic embryos in callus

cultures. Phytomorphology. 28: 74- 81.

xii

125. Halanych KM (2004). The new view of animal phylogeny. Annual Review of

Ecology Evolution and Systematics, 35:229-256.

126. Hamann O (1991). The joint IUCN-WWF plant conservation program and its

interests in Medicinal plants. In: The Conservation of Medicinal Plants, Akerele

Heywood V and Synge H (Eds.) Cambridge University Press, Cambridge, pp. 1322.

127. Haramaki C and Murashige T (1972). In vitro culture of Gloxinia. HortScience 7,

339.

128. Haramaki C (1971). Tissue culture of Gloxinia. Comb. Proc. Int. Plant Prop. Soc.

21, 442-448.

129. Harney SK, Edwards FS and Allen MF (1997). Identification of arbuscular

mycorrhizal fungi from Artemisia californica using the polymerase chain reaction.

Mycologia 89: 547-550.

130. Hassan AKM and Roy SK (2005). Micropropagation of Gloriosa superba L.

Through High Frequency Shoot Proliferation. Plant Tissue Cult. and Biotech. 15(1):

67-74.

131. Hassan AKMS, Afroz F, Bari LS, Munshi JL, Jahan MAA and Khatun R (2008).

Callus Induction and High Frequency Regeneration of Plantlets of Scoparia dulcis L.,

a Perennial Medicinal Herb, Through Auxiliary Shoot Proliferation. Plant Tissue

Cult. & Biotech. 18(1): 75-83.

132. Hecht SM (1980) (q.v.). Probing the cytokinin receptor site(s). pp. 144- 160 in

Skoog F. (ed.).

133. Hemerly A, Ferreira P, Engler J, Engler G, Inze D and Vanmontagu M (1993).

The control of cell cycle in Arabidopsis plant cell cultures. J. Plant Res. 51-56 Sp.

Iss. 3.

134. Hempel M, Petos-Witkowska B and Tymoszuk J (1985). The influence of

cytokinins on multiplication and subsequent rooting of Gerbera in vitro. Acta Hortic.

167: 301-305.

135. Henry AN, Kumari GR and Chithra V (1987). Flora of Tamil Nadu, India. Ser.

1: Vol. 2. Botanical Survey of India, Coimbatore.

136. Johnson HE and Crosby DG (1973), "Indole-3-acetic Acid", Org. Synth.; Coll.

Vol. 5: 654

xiii

137. Hillis DM and Dixon MT (1991). Ribosomal DNA: molecular evolution and

phylogenetic inference. The Quarterly Review of Biology, 66(4):411-453.

138. Hirsch G and Braun U (1992) Communities of microfungi. In: Biodiversity of

Fungi Inventory and Monitoring Methods, eds, Mueller G F, Foster M S., pp 242-

250. Elsevier Academic Press, London. ISBN: 0.12.509551-1.

139. Hong SG, Maccaroni M, Figuli PJ, Pryor BM and Belisario A (2006). Polyphasic

classification of Alternaria spp. isolated from hazelnut and walnut in Europe. Mycol.

Res. 110:1290-1300.

140. Hu CY and Wang PJ (1983) Meristem shoot tip and bud cultures. In: Evans, D.A.,

Sharp, W.R., Ammirato, P.V. and Yamada, Y. (Eds.). Handbook of Plant Cell

Culture, Vol. 1. Macmillan, New York. Pp 177-227.

141. Huddedar SB, Shete AM, Tilekar JN, Gore SD, Dhavale DD and Chopade BA

(2001), Isolation, characterization and plasmid pUPI 126- mediated indole-3-acetic

acid production in Acetobacter strains from rhizosphere of wheat. Appl Biochem

Biotech, 21:102-103.

142. Hyde KD and Soytong K (2007). Understanding microfungal diversity-a critique.

Cryptogamie Mycologie 28: 281-289.

143. Hyde KD and Soytong K (2008). The fungal endophyte dilemma. Fungal

Diversity 33: 163- 173.

144. Hyun JW and Clark CA (1998). Analysis of Fusarium lateritium using RAPD and

rDNA RFLP techniques. Mycol. Res. 102:1259-1264.

145. Inocha SC and Nissen P (1985). Uptake of 2,4-dichlorophenoxyacetic acid and

indole acetic acid in tuber slices of Jerusalem artichoke and potato. J. Plant Physiol.

120: 351-362.

146. Irvine JE, Fitch M and Moore PH (1983). The induction of callus in sugarcane

tissue cultures by selected chemicals. Plant Cell Tiss. Organ Cult. 2: 141-149.

147. Iwamura H, Masuda N, Koshimizu K and Matsubara S (1980). Effects of 4-

alkylaminopteridines on tobacco callus growth. Plant Sci. Lett. 20: 15-18.

148. Jain R and Babber SB (2006). Xanthan Gum: An Economical substitute for agar

in plant tissue culture media, Plant Cell rep, 25: 81-84.

xiv

149. Janarthanam B and Seshadri S (2008). Plantlet regeneration from leaf derived

callus of Vanilla planifolia Andr. In Vitro Cell.Dev.Biol.-Plant 44:84–89.

150. Jeewon R, Liew ECY and Hyde KD (2004). Phylogenetic evaluation of species

nomenclature of Pestalotiopsis in relation to host association. Fungal Diversity 17:

39-55.

151. John PCL, Zhang K, Dong C, Diederich L and Wightman F (1993). P34 (CDC2)

related proteins in control of cell-cycle progression. The switch between division and

differentiation in tissue development and stimulation and division by auxin and

cytokinin. Austr. J. Plant Physiol. 20: 503-526.

152. Johnson JA and Whitney NJ (1992). Isolation of fungal endophytes from black

spruce (Picea mariana) dormant buds and needles from New Brunswick, Canada.

Canadian Journal of Botany 70: 1754-1757.

153. Johnson TS, Narayan SB and Narayana DBA (1977) Rapid in vitro propagation

of Saussurea lappa, an endangered medicinal plant, through multiple shoot cultures.

In vitro cellular and developmental biology. 33(2): 128-130.

154. Johnston PR, Pennycook SR, Manning MA (2005). Taxonomy of fruit rotting

fungal pathogens: what’s really out there? New Zealand Plant Protection 58: 42–46.

155. Jouanneau JP (1971). Côntrole par les cytokinines de la synchronization des

mitoses dans les cellules de tabac. Exp. Cell Res. 67: 329-337.

156. Jouanneau JP, Lapous D and Guern J (1991). In plant protoplasts, the spontaneous

expression of defense reactions and the responsiveness to exogenous elicitors are

under auxin control. Plant Physiol. 96:459–466.

157. Jow H, Hudelot C, Rattray M, Higgs P (2002). Bayesian phylogenetics using an

RNA substitution model applied to early mammalian evolution. Molecular Biology

and Evolution, 19(9):1591-1601.

158. Kanyand M, Peterson CM, Prakash CS (1997). The differentiation of emergences

into adventitious shoots in peanut, Arachis hypogaea L. Plant Sci. 126: 87-95.

159. Kaparakis G and Alderson PG (2003). Differential callus type formation by

auxins and cytokinin in in vitro cultures of pepper (Capsicum annuum L.).- Plant

Biosystems 137: 275-280.

xv

160. Kaper JM and Veldstra H (1958). On the metabolism of tryptophan by

Agrobactrium tumefaciens. Biochim Biophy Acta, 30: 401-430.

161. Karuppusamy S (2009). A review on trends in production of secondary

metabolites from higher plants by in vitro tissue, organ and cell cultures. J Med Plant

Res 3: 1222–1239.

162. Klocke JA and Myers P (1984). Chemical control of thrips on cultured

Simmondsia chinensis (Jojoba) shoots. Hort. Sci. 19:440.

163. Koens KB, Nicoloso FT, Van Vliet TB, Harteveld M, Boot CJM, Van Iren F,

Mulder P, Libbenga KR and Kijne JW (1995). Kinetics of 2,4- dichlorophenoxyacetic

acid content in an auxin-dependent suspension culture of Nicotiana tabacum cells J.

Plant Physiol. 147: 383-390.

164. Komalavalli N and Rao MV (2000). In vitro micropropagation of Gymnema

sylvestre- A multipurpose medicinal plant. Plant Cell, Tissue and Organ Culture.

61(2): 97-105.

165. Konwar BK and Coutts RHA (1990). Rapid regeneration of sugar beet (Beta

vulgaris L.) plants from in vitro cultures. pp. 114-118 in Nijkamp et al. (eds.) 1990

(q.v.).

166. Kumaresan V and Suryanarayanan TS (2002). Endophytic assemblages in young,

mature and senescent leaves of Rhizophora apiculata: evidence for the role of

endophytes in mangrove litter degradation. Fungal Diversity 9: 91-91.

167. La Rue CD (1936). The growth of plant embryos in culture. B. Torrey Bot. Club

63, 365-382.

168. Lacap DC, Hyde KD and Liew ECY (2003). An evaluation of the fungal

‘morphotype’ concept based on ribosomal DNA sequences. Fungal Diversity 12: 53-

66.

169. Lans C, Harper T, Georges K and Bridgewater E (2000). Medicinal plants used

for dogs in Trinidad and Tobago. Prev Vet Med. 45:201-220.

170. Latha M, Pari L, Sitasawad S and Bhonde R (2004). Insulin-secretagogue activity

and cytoprotective role of the traditional antidiabetic plant Scoparia dulcis (Sweet

Broomweed) . Life Science. 75: 2003-2014.

xvi

171. Lebuhn M and Hartmann A (1993), Method for the determination of indole-acetic

acid and related compounds of L-tryptophan catabolism in soils. J chromatogr, 6: 25-

27.

172. Legrand B (1972). Influence des conditions initiales d’éclairement sur le

bourgeonnement et la polarité de tissus de feuilles d’endive cultivés in vitro. Compt.

Rend. Acad. Sci. Paris 275D: 31-32.

173. Leifert C and Cassells AC (2001). Microbial hazards in plant tissue and cell

cultures. In Vitro Cell. Dev. Biol. Plant 37:133-138.

174. Leifert C, Morrris EC and Waites MW (1994). Ecology of microbial saprophytes

and pathogens in tissue culture and field grown plants: reasons for contamination

problems in vitro. Critical reviews in plant sciences 13(2): 139-183.

175. Leifert C, Morris C and Waites WM (1994). Ecology of microbial saprophytes

and pathogens in tissue cultured and field grown plants. CRC Crit. Rev. Plant Sci.

13:139-183.

176. Leifert C, Ritchie J and Waites WM (1991). Contaminants of plant tissue and cell

cultures. World J. Microbiol. Biotechnol. 7:452-469.

177. Leifert C and Waites WM (1992). Bacterial growth in plant tissue cultures. J.

Appl. Bacteriol. 72:460-466.

178. Leljak-Levanic D, Bauer N, Mihaljevic S and Jelaska S (2004). Changes in DNA

methylation during somatic embryogenesis in Cucurbita pepo L. Plant Cell Rep. 23:

120-127.

179. Leslie JF, Zeller KA, Lamprecht SC, Rheeder JP and Marasas WFO (2005).

Toxicity, pathogenicity, and genetic differentiation of five species of Fusarium from

sorghum and millet. Phytopathology 95: 275-283.

180. Leyser HMO, Pickett FB, Dharmasiri S and Estelle M (1996). Mutation in AXR3

gene of Arabidopsis result in altered auxin response including ectopic expression

from the SAUR-AC1 promoter. Plant J. 10: 403-413.

181. Li Y, Shi XY, Strabala TJ, Hagen G and Guilfoyle TJ (1994). Transgenic tobacco

plants that overproduce cytokinins show increased tolerance to exogenous auxin and

auxin transport inhibitors. Plant Science 100: 9-14.

xvii

182. Li Z, Jarret RL, Pittman RN, Demski JW (1994). Shoot organogenesis from

cultured seed explants of peanut (Arachis hypogaea L.) using thiadiazuron. In Vitro

Cell. Dev. Biol. Plant, 30: 187-191.

183. Ligrone R, Carafa A, Lumini E, Bianciotto V, Bonfante P and Duckett JG (2007).

Glomeromycotean associations in liverworts: A molecular cellular and taxonomic

analysis. American Journal of Botany 94: 1756-1777.

184. Linsmaier EM and Skoog F (1965). Organic growth factor requirements of

tobacco tissue cultures. Physiol. Plant. 18: 100- 127.

185. Liu D, Coloe S, Baird R and Pederson J (2000). Rapid mini-preparation of fungal

DNA for PCR. J. Clin. Microbiol. 38: 471.

186. Lo Schiavo F, Pitto L, Giuliano G, Torti G, Nuti-Ronchi V, Marazziti D, Veraga

R, Orselli S and Terzi M (1989). DNA methylation of embryogenic carrot cell

cultures and its variations as caused by maturation, differentiation, hormones and

hypomethylation drugs. Theor. Appl. Genet. 77: 325.

187. Lodge DJ, Fisher PJ and Sutton BC (1996). Endophytic fungi of Manilkara

bidentata leaves in Puerto Rico. Mycologia 88: 733-738.

188. Lohmann CP, Heeb M, Linde HJ, Gabel VP and Reischl U (1998). Diagnosis of

infectious endophthalmitis after cataract surgery by polymerase chain reaction. J

Cataract Refract Surg, 24(6):821-826.

189. Loo SW (1945). Cultivation of excised stem tips of Asparagus in vitro. Am. J.

Bot. 32: 13-17.

190. Loo SW (1946). Further experiments on the culture of excised asparagus tips in

vitro. Am. J. Bot. 33: 156-159.

191. Lord NS, Kaplan CW, Shank P, Kitts CL and Elrod SL (2002). Assessment of

fungal diversity using terminal restriction fragment (TRF) pattern analysis:

comparison of 18S and ITS ribosomal regions. FEMS Microbiology Ecology 42: 327-

337.

192. Lubbe CM, Denman S, Cannon, PF, Groenewald JZ, Lamprecht SC and Crous

PW (2004) Characterization of Colletotrichum species associated with diseases of

Proteaceae. Mycologia 96: 1268–1279.

xviii

193. Ludwig-Muller J and Epstein E (1991). Occurrence and in vivo biosynthesis of

indole 3-butyric acid in corn (Zea mays L.). Plant Physiol. 97: 765-770.

194. Lui Z and Li Z (2001). Micropropagation of Camptotheea aeuminata Decaisne

from axillary buds, shoot tips and seed embryos in tissue culture system. In Vitro Cell

Dev. Biol. Plant. 37: 84-88.

195. Luna C, Collavino M, Mroginski L and Sansberro P (2008). Identification and

control of bacterial contaminants from Ilex dumosa nodal segments culture in a

temporal immersion bioreactor system using 16S rDNA analysis. Plant Cell Tiss

Organ Cult, 95:13–19.

196. Machakova I, Zazimalova E and George EF (2008). Plant Growth Regulators I:

Introduction; Auxins, their Analogues and Inhibitors. In: George E. F., Hall M. A.,

De Klerk G.-J. (Eds). Plant propagation by tissue culture, vol. 1, Springer, The

Netherlands: 175-204.

197. Magnani M, Fernandes T, Prete CEC, Homechim M, Ono UYS, Vilas-Boas LA,

Sartori D, Cristina M, Furlaneto S and Fungaro MHP (2005). Molecular identification

of Aspergillus spp. isolated from coffee beans. Scientia Agricola 62: 45-49.

198. Magnani M, Fernandes T, Prete CEC, Homechim M, Ono UYS, Vilas-Boas LA,

Sartori D, Cristina M, Furlaneto S and Fungaro MHP (2005). Molecular identification

of Aspergillus spp. isolated from coffee beans. Scientia Agricola 62: 45-49.

199. Mahesh B, Tejesvi MV, Nalini MS, Prakash HS, Kini KR, Subbiah V and Shetty

HS (2005). Endophytic fungi from Azadirachta indica (A. Juss.) inner bark. Current

Science 88: 218-219.

200. Manulis S, Haviv-Chesner A, Brandl MT, Lindow SE and Barash I (1998).

Differential involvement of indole-3-acetic acid biosynthetic pathways in

pathogenicity and epiphytic fitness of Erwinia herbicola pv. gypsophilae. Mol. Plant-

Microbe Interact. 11:634–642.

201. Manulis S, Valinski L, Gafni Y and Hershenhorn J (1991). Indole-3-acetic acid

biosynthetic pathways in Erwinia herbicola in relation to pathogenicity on

Gypsophila paniculata. Physiol. Mol. Plant Pathol. 39:161–171.

202. Marcotrigiano M and Stimart DP (1981). In vitro organogenesis and shoot

proliferation of Paulownia tomentosa Steud. (Empress tree). HortScience 16: 405.

xix

203. Martin KP (2002). Rapid propagation of Holostema ada-kodien Schult. a rare

medicinal plant, through axillary bud multiplication and indirect organogenesis. Plant

Cell Rep. 21: 112-117.

204. Martin KP (2003). Plant regeneration through somatic embryogenesis on

Holostema adakodien Schult., a rare medicinal plant. Plant Cell Tiss. Orga. Cult. 72:

79-82.

205. Martin G, Geetha SP, Raja Sudhakaran S, Raghu AV, Balachandran I, Ravindran

PN (2006) An efficient micropropagation system for Celastus paniculatus Willd. A

vulnerable medicinal plant. Journal of Forest Research, 11(6): 461-465.

206. Mathew AJ, Jayachandran K and Mathew J (2010). Endophytic Penicillium

citrinum Thom. from Scoparia dulcis Linn. Indian J Microbiol., 50(Suppl 1): S99–

S102.

207. Mbofung GY, Hong SG and Pryor BM (2007). Phylogeny of Fusarium

oxysporum f. sp. lactucae inferred from mitochondrial small subunit, elongation

factor 1- , and nuclear ribosomal intergenic spacer sequence data. Phytopathology

97:87-98.

208. McKay SF, Freeman S, Minx D, Mayman M, Sedgley M, Collin GC, and Scott

ES (2009). Morphological, genetic, and pathogenetic characterization of

Colletotrichum acutatum, the cause of anthracnose of almond in Australia.

Phytopathology 99:985-995.

209. Miller CO (1961). Kinetin related compounds in plant growth. Ann. Rev. Plant

Physiol. 12: 395-408.

210. Miller GL (1959). Use o dinitrosalicylic acid reagent for determination of

reducing sugar. Analytical Biochemistry, New York, 31: 426-428.

211. Minocha SC (1987). pH of the medium and the growth and metabolism of cells in

culture. pp. 125-141 in Bonga and Durzan (eds.) 1987 Cell and Tissue Culture in

Forestry Vol 1. General Principles and Biotechnology. Martinus Nijhoff Publishers,

Dordrecht, Boston, Lancaster. ISBN 90-247-3430-4.

212. Misawa M (1994). Plant tissue culture: an alternative for production of useful

metabolite. FAO Agricultural Services Bulletin No. 108. Roma, Italy: Food and

Agriculture Organization of the United Nations.

xx

213. Mitchell SA, Millar M, Webster S and Ahmad MH (2003). The Application of

Biotechnology in Environmental Management and Sustainable Development:

Medicinal Plant Utilization, at the Jamaica Institute of Environmental Professionals

(JIEP) National Scientific Conference on the Environment entitled "Advancing

Environmental Knowledge Towards Decision Making in Sustainable Development",

Jamaica Conference Centre, Jamaica.

214. Moerman DE (1998). Native North American food and medicinal plants:

epistemological considerations. In: Prendergast, H.D.V., Etkin, N.L., Harris, D.R. and

Houghton, P.J. (Eds). Plants for food and medicine. Proc. Joint Conference of the

Society for Economic Botany and the International Society for Ethno pharmacology,

London, 1-6 July 1996, Royal Botanic Gardens, Kew, UK, pp. 69-74.

215. Mohapatra HP and Rath SP (2005). In vitro studies of Bacopa monnieri: An

important medicinal plant with reference toits biochemical variations. Indian Journal

of Experimental Biology. 43(4): 373-376.

216. Moore PB, Steitz TA (2002). The involvement of RNA in ribosome function.

Nature, 418(6894):229-235.

217. Morakotkarn D, Kawasaki H and Seki T (2007). Molecular diversity of bamboo-

associated fungi isolated from Japan. FEMS Microbiology Letters 266: 10-19.

218. Moshkov IE, Novikova GV, Hall MA and George EF (2008). Plant Growth

Regulators III: Gibberellins, Ethylene, Abscisic Acid, their Analogues and Inhibitors;

Miscellaneous Compounds. In: George E. F., Hall M. A., De Klerk G.-J. (Eds). Plant

propagation by tissue culture, vol. 1, Springer, The Netherlands: 227-282.

219. Mungole A, Awati R, Dey S, Chaturvedi A and Zanwar P (2009). In-vitro callus

induction and shoot regeneration in Ipomoea obscura (L.): potent Indian medicinal

plant. Indian Journal of Science and Technology. 2 (8): 24-26.

220. Mungole AJ, Doifode VD, Kamble RB, Chaturvedi A and Zanwar P (2011). In-

vitro callus induction and shoot regeneration in Physalis minima L. Annals of

Biological Research, 2 (2) : 79-85

221. Murashige T and Skoog F (1962). A revised medium for rapid growth and

bioassays with tobacco tissue culture. Physiologia Plantarum 15: 473-497.

xxi

222. Murashige T (1961). Supression of shoot formation in cultured tobacco cells by

gibberellic acid. Science 134: 280.

223. Murashige T, Shabde MN, Hasegawa PN, Takatori FH and Jones JB (1972).

Propagation of asparagus through shoot apex culture. I. Nutrient media for formation

of plantlets. J. Am. Soc. Hort. Sci. 97: 158-161.

224. Murashige T (1974) Plant propagation through tissue cultures. Ann. Rev. Plant

Physiol. 25: 135 166.

225. Mutaftschiev S, Cousson A and Tran Thanh Van K (1987). Modulation of cell

growth and differentiation by pH and oligosaccharides. pp. 29-42 in Jackson et al.,

(eds.) 1987 (q.v.).

226. Muthumary J and Sashirekha S (2007). Detection of taxol, an anticancer drug,

from selected coelomycetous fungi. Indian J.Sci.Technol. 1(1): 1-9.

227. Nabors MW, Heyser JW, Dykes TA and De Mott KJ (1983). Long-duration, high-

frequency plant regeneration from cereal tissue cultures. Planta 157, 385-391.

228. Nakagarwara S, Goto T, Nara M, Ozawa Y, Hotta K, Arata Y (1998).

Spectroscopic characterisation and the pH dependence of bacterial activity of the

aqueous chlorine solution. Anal. Sci. 14: 691-698.

229. Nalim FA, Elmer WH, McGovern RJ and Geiser DM (2009). Multilocus

phylogenetic diversity of Fusarium avenaceum pathogenic on lisianthus.

Phytopathology 99:462-468.

230. Narasimhan D and Irwin SJ (2008). Floral Database of Tamil Nadu.

http://tnenvis.nic.in/database_bio_flo.htm. ENVIS, Tamil Nadu.

231. Nasr Esfahani M and Ansari Pour B (2008). Differences in resistance in onion

cultivars to pink root rot disease in Iran. J. Gen. Plant Pathol. 74: 46-52.

232. Natesh S (1999). Conservation of medicinal and aromatic plants in India- an

overview. In: Kamaruddin MS. In: Natesh S.; Osman A.; Azizol A. K. (eds)

Medicinal and aromatic plants: strategies and technologies for conservation. Forest

Research Institute, Kuala Lumpur, pp 1–11.

233. Nishritha B and Sanjay S (2008). In vitro propagation of a high value medicinal

plant: Asparagus racemosus Willd. In Vitro Cell Dev Biol-Plant 44: 525–432.

xxii

234. Nitsch JP, Nitsch C, Rossini LME and Bui Dang HAD (1967). The role of

adenine in bud differentiation. Phytomorph. 17, 446-453.

235. Nitschke E, Nihlgard M and Varrelmann M (2009). Differentiation of eleven

Fusarium spp. isolated from sugar beet, applying restriction fragment analysis of

polymerase chain reaction-amplified translation elongation factor 1 gene fragment.

Phytopathology 99:921-929.

236. Nitschke E, Nihlgard M and Varrelmann M (2009). Differentiation of eleven

Fusarium spp. isolated from sugar beet, applying restriction fragment analysis of

polymerase chain reaction-amplified translation elongation factor 1 gene fragment.

Phytopathology 99:921-929.

237. Noor Adila AK, Farah Diba AB, Zamri Z, Wan Mohtar WY, Aidil AH, Mahadi

NM and Murad AMA (2007). Comparison of methods for isolating high quality DNA

and RNA from an oleaginous fungus Cunninghamella bainieri strain 2a1. Mal. J.

Microbiol. 3: 7-13.

238. Norris RF and Bukovak MJ (1972). Effect of pH on penetration of naphthalene

acetic acid and naphthalene acetamide through isolated pea leaf cuticle. Plant

Physiol. 49: 615-618.

239. Nowak J and Brown GN (1979). Free and bound gibberellin activities and ent-

kaurene synthesis during induction of cold hardiness in black locust seedlings.

Physiological Plantarum 45: 11–16.

240. O’Connell R, Herbert C, Sreenivasaprasad S, Khatib M, Esquerré- Tugayé M-T

and Dumas B (2004). A novel Arabidopsis-Colletotrichum pathosystem for the

molecular dissection of plant-fungal interactions. Molecular Plant-Microbe

Interactions 17: 272–282.

241. O'Connell R, Herbert C, Sreenivasaprasad S, Khatib M, Esquerré-Tugayé M-T

and Dumas, B (2004). A novel Arabidopsis-Colletotrichum pathosystem for the

molecular dissection of plant-fungal interactions. Molecular Plant-Microbe

Interactions 17: 272-282.

242. Okamoto I, Isogai Y and Koizumi T (1967). Isolation of indole-3- acetic acid,

phenylacetic acid and several plant growth inhibitors from etiolated seedlings of

Phaseolus. Chem. Pharm. Bull. 15: 159 – 163

xxiii

243. Okane I, Nakagiri A and Ito T (2001). Identity of Guignardia sp. inhabiting

ericaceous plants. Canadian Journal of Botany 79: 101-109.

244. Oyebanji OB, Nweke O, Odebunmi O, Galadima NB, Idris MS, Nnodi UN,

Afolabi AS and Ogbadu GH (2009). Simple, effective and economical explant-

surface sterilization protocol for cowpea, rice and sorghum seeds. African Journal of

Biotechnology Vol. 8 (20): 5395-5399.

245. Passos LP (1996). Métodos analíticos e laboratoriais em fisiologia vegetal.

Coronel Pacheco: Embrapa-Cnpgl, 233p.

246. Pastrana LM, Gonzalez MP and Murado MA (1993). Production of gibberellic

acid from mussel processing wastes in submerged batch culture. Bioresource

Technology 45: 213–221.

247. Patten CL and Glick BR (2002). Role of Pseudomonas putida Indoleacetic Acid

in Development of the Host Plant Root System. Applied and Environmental

Microbiology, 68(8): 3795–3801.

248. Patten CL and Glick BR (1996). Bacterial biosynthesis of indole-3-acetic acid.

Can. J. Microbiol. 42:207–220.

249. Pegg GF (1973), Gibberellin like substances in the sphorophores of Agaricus

bisporus (Lange) imbach. J. of Exp. Botany, 24 (81): 675-688.

250. Peintner U, Moser MM, Thomas KA and Manimohan P (2003). First records of

ectomycorrhizal Cortinarius species (Agaricales, Basidiomycetes) from tropical India

and their phylogenetic position based on rDNA ITS sequences. Mycological Research

107: 485-494.

251. Percival FW, Purves WK and Vickery LE (1973). Indole-3-ethanol oxidase.

Kinetics, inhibition and regulation by auxins. Plant Physiol. 51: 739-743.

252. Perfect SE, Hughes HB, O’Connell RJ and Green JR (1999). Colletotrichum: a

model genus for studies on pathology and fungal–plant interactions. Fungal Genetics

and Biology 27:186–198.

253. Petersson SV, Johansson AI, Kowalczyk M, Makoveychuk A, Wang JY, Moritz

T, Grebe M, Benfey PN, Sandberg G and Ljung K (2009). An Auxin Gradient and

Maximum in the Arabidopsis Root Apex Shown by High-Resolution Cell-Specific

Analysis of IAA Distribution and Synthesis. The Plant Cell 21:1659-1668.

xxiv

254. Petrini O, Stone J and Carroll FE (1982). Endophytic fungi in evergreen shrubs in

western Oregon: A preliminary study. Canadian Journal of Botany 60: 789-796.

255. Pfaza GA, Upchurch R, Brigmon RL, Whitman WB and Ulfig K (2004). Rapid

DNA extraction for screening soil filamentous fungi using PCR amplification. Pol. J.

Environ. Stud. 13: 315-318.

256. Phillips GC and Collins GB (1981). Induction and development of somatic

embryous from cell suspension cultures of soybean. Plant Cell Tissue Organ Cult.

1:123-129.

257. Phillips AJL, Crous PW and Alves A (2007). Diplodia seriata, the anamorph of

"Botryosphaeria" obtusa. Fungal Diversity 25: 141-155.

258. Photita W, Lumyong S, Lumyong P and Hyde KD (2001). Endophytic fungi of

wild banana (Musa acuminata) at Doi Suthep Pui National Park, Thailand.

Mycological Research 105: 1508-1513.

259. Phoulivong S, Cai L, Chen H, McKenzie EHC, Abdelsalam K, Chukeatirote E,

KD (2010). Colletotrichum gloeosporioides is not a common pathogen on tropical

fruits. Fungal Diversity 44: 33–43.

260. Pierik RLM, Steegmans HHM, Verhaegh JAM and Wouters AN (1982). Effect of

cytokinin and cultivar on shoot formation of Gerbera jamesonii in vitro. Neth. J.

Agric. Sci. 30: 341-346.

261. Pirt SJ and Callow DS (1960). Studies of the growth of Penicillium chrysogenum

in continuous flow culture with reference to penicillin production. Journal of Applied

Bacteriology 23: 87–97.

262. Prakash E, Sha Valli Khan PS, Sairam Reddy P and Rao KR (1999). Regeneration

of plants from seed-derived callus of Hybanthus enneaspermus L. Muell., a rare

ethnobotanical herb. Plant Cell Rep. 18: 873-878.

263. Preece J (2008). Stock Plant Physiological Factors Affecting Growth and

Morphogenesis. In: George E. F., Hall M. A., De Klerk G.-J. (Eds). Plant propagation

by tissue culture, vol. 1, Springer, The Netherlands: 403-423.

264. Promputtha I, Jeewon R, Lumyong S, McKenzie EHC and Hyde KD (2005).

Ribosomal DNA fingerprinting in the identification of non sporulating endophytes

from Magnolia liliifera (Magnoliaceae). Fungal Diversity 20: 167-186.

xxv

265. Pype J, Everaert K and Debergh PC (1997). Contamination by micro-arthropods.

In: Cassells, A. C., ed. Pathogen and microbial contamination management in

micropropagation. Dordrecht: Kluwer Academic Publishers; 259-266.

266. Quaroni S, Sarcchim M, Signorini E (1997) Improvement of crop production

induced by root endophytic Streptomycetes- 10th Congress of The Mediterranian

Phytopathological Union, Montpelier France 1–5, June, pp 449–452.

267. Queloz V, Grunig CR, Sieber TN and Holdenrieder O (2005). Monitoring the

spatial and temporal dynamics of a community of the tree-root endophyte

Phialocephala fortinii sl. New Phytologist 168: 651-660.

268. Rademacher W (1992), Inhibition of gibberellin production by plant growth

retardants in the fungi Gibberella fujikuroi and Sphaceloma monihoticola. Plant

Physiol., 100, 625-629.

269. Raeder U and Broda P (1985). Rapid preparation of DNA from filamentous fungi.

Lett. Appl. Microbiol. 1: 17-20.

270. Raggio M, RAGGIO N and Torrey JG (1957). The nodulation of isolated

leguminous roots. Am. J. Bot. 44: 325-334.

271. Rajagopal K (1999). Biology and ecology of fungal endophytes of forest trees

with special reference to neem (Azadirachta indica A. Juss). Ph.D. dissertation.

University of Madras, Chennai, India.

272. Rajagopal K (2004). Endophytic fungi of a plam, Borassus flabellifer L. – As first

report from India. AJMBES. 6(4): 541-544.

273. Rajagopal K and Suryanarayanan TS (2000). Isolation of endophytic fungi from

the leaves of neem (Azadirachta indica A.Juss). Current Science. 78(11): 1375-1378.

274. Rajagopal K, Kalavathy S, Kokila S, Karthikeyan S, Kathiravan G & Prasad R

and Balasubraminan P (2010). Diversity of Fungal Endophytes in Few Medicinal

Herbs of South India. Asian J. Exp. Biol. Sci. 1 (2): 415- 418.

275. Randhir RJ and Hanau RM (1997). Size and Complexity of the Nuclear Genome

of Colletotrichum graminicola. Appl. Environ. Microbiol. 63(10): 4001–4004.

276. Ratnam W and Teik NL (1999). Practical applications of biotechnology in

conservation of medicinal and aromatic plants. In: Kamaruddin M. S.; Natesh S.;

xxvi

Osman A.; Azizol A. K. (eds) Medicinal and aromatic plants: strategies and

technologies for conservation. Forest Research Institute, Kuala Lumpur, pp 53–62.

277. Ratnasooriya WD, Jayakody JR, Premakumara GA and Ediriweera ER (2005)

Antioxidant activity of water extract of Scoparia dulcis. Fitoterapia. 76:220-222.

278. Raven JA (1979). The possible role of membrane electrophoresis in the polar

transport of IAA and other solutes in plant tissues. New Phytol. 82: 285-291.

279. Rayle DL and Purves WK (1967). Conversion of indole-3- ethanol to indole-3-

acetic acid in cucumber seedling shoots. Plant Physiol. 42: 1091-1093.

280. Reinert J (1958). Uber die Kontrolle der Morphogenese and die Induktion Von

Adventivembryonen and Gewebek Ulturen aus Korotten. Planta. 53: 318-333.

281. Rheeder JP, Marasas WFO and Nelson PE (1996). Fusarium globosum, a new

species from corn in southern Africa. Mycologia 88: 509-513.

282. Riel MA, Kyle DE and Milhous WK (2002). Efficacy of scopadulcic acid A

against Plasmodium falciparum in vitro . J Nat Prod. 65: 614-615.

283. Righelato RC, Imrie FKE and Vlitos AJ (1976) Production of single cell protein

from agricultural and food processing wastes. Resource Recovery and Conservation

1: 257–269.

284. Robbins WJ (1922). Cultivation of excised root tips and stem tips under sterile

conditions. Bot. Gaz. 73: 376-390.

285. Robinette D, and Matthysse AG (1990). Inhibition by Agrobacterium tumefaciens

and Pseudomonas savastanoi of development of the hypersensitive response elicited

by Pseudomonas syringae pv. phaseolicola. J. Bacteriol. 172:5742–5749.

286. Robinson M, Riov J and Sharon A (1998). Indole-3-acetic acid biosynthesis in

Colletotrichum gloeosporioides f. sp. aeschynomene. App Environ Microbiol,

64:5030-5032.

287. Rossi V, De Paoli B and Dal Pozzo P (1991). Propagation of Pyrus calleryana

Sel. D6 by in vitro culture. Acta Hortic. 300: 145-147.

288. Rout GR, Samantaray S and Das P (2000). In vitro manipulation and propagation

of medicinal plants. Biotechnol Adv 18: 91–120.

289. Rout GR (2005) Micropropagation of Clitoria ternatea Linn. In Vitro Cellular &

Developmental Biology - Plant, 41(4): 516-519.

xxvii

290. Sachs T and Thimann KV (1964). Release of lateral buds from apical dominance.

Nature 201: 939-940.

291. Saikkonen K, Wali P, Helander M, Faeth SH (2004). Evolution of endophyte-

plant symbioses. Trends in Plant Science. 9:275-280.

292. Sambrook J and Russel DW (2001). Molecular Cloning: a Laboratory Manual.

3rd edn. Cold Spring Harbor Laboratory Press, New York.

293. Sanchez Marquez S, Bills GF and Zabalgogeazcoa I (2007). The endophytic

mycobiota of the grass Dactylis glomerata. Fungal Diversity 27: 171-195.

294. Sandberg G, Ostin A, Edlund F, Sitbon B and Sandberg O (1993). Regulation of

indole-3-acetic acid turnover in plants. Plant and Plant Cells Canterbury Meeting:

20.

295. Santori A and Belisario A (2008). La necrosi grigia della nocciola: eziologia ed

epidemiologia. Inf. Fitopatol. Suppl. Terra Vita 22:18-23.

296. Santori A, Vitale S, Luongo L and Belisario A (2010). First report of Fusarium

lateritium as the agent of nut gray necrosis on hazelnut in Italy. Plant Dis. 94:484.

297. Santos, C. Dos G, Paiva R, Paiva PDO, Paiva E (2003). Indução e análise

bioquímica de calos obtidos de segmentos foliares de Coffea arabica L., cultivar

RUBI. Ciência e Agrotecnologia, 27( 3): 571-577.

298. Saotome M, Shirahata K, Nishimura R, Yahaba M. Kawaguchi M, Syono K,

Kitsuwa T, Ishii Y and Nakamura T (1993). The identification of indole-3-acetic acid

and indole-3-acetamide in the hypocotyls of Japanese cherry. Plant Cell Physiol. 34:

157-159.

299. Scher J (2004). Federal Noxious Weed disseminules of the U.S. Center for Plant

Health Science and Technology, Plant Protection and Quarantine, Animal and Plant

Health Inspection Service, U.S. Department of Agriculture. Online. Available:

http://www.lucidcentral.org/keys/v3/FNW/ (Accessed 2007).

300. Schippmann U, Leaman DJ and Cunningham AB (2002) Impact of cultivation

and gathering of medicinal plants on biodiversity: global trends and issues. Inter-

Department Working Group on Biology Diversity for Food and Agriculture, Food

and Agricultural Organisation of the United Nations, Rome, Italy.

xxviii

301. Schraudolf H and Reinert J (1959). Interaction of plant growth regulators in

regeneration processes. Nature 184: 465-466.

302. Schulz B, Boyle C, Draeger S, Rommert AK and Krohn K (2002). Endophytic

fungi: a source of novel biologically active secondary metabolites. Mycological

Research. 106:996-1004.

303. Schulze D (1988). Saintpaulia ionantha H. Wendl. – In vitro propagation and

acclimatization in a commercial laboratory. Acta Hortic. 226: 619-622.

304. Scott KJ, DALY J and Smith HH (1964). Effects of indoleacetic acid and kinetin

on activities of enzymes of the hexose monophosphate shunt in tissue cultures of

Nicotiana. Plant Physiol. 39: 709-712.

305. Selim MSN, Abdulla ME and Radi SH (1985), Production of gibberellins and

indoles by some soil fungi. The Egyptian Bot. Soc. Proceedings, 1: 316-380.

306. Serra AGP, Paiva R, Paiva PDO (2000). Análises bioquímicas de calos formados

de explantes foliares de castanheira-do-Brasil (Bertholletia excelsa H. B. K.) Ciência

e Agrotecnologia, Lavras, 24(4): 833-840.

307. Sette LD, Passarini MRZ, Delarmelina C, Salati F and Duarte MCT (2006).

Molecular characterization and antimicrobial activity of endophytic fungi from coffee

plants. World Journal of Microbiology and Biotechnology 22:1185-1195.

308. Sharma KK and Anjaiah V (2000). An efficient method for the production of

transgenic plants of peanut (Arachis hypogaea L.) through Agrobacterium

tumefaciens - mediated genetic transformation. Plant Sci. 159: 7-19.

309. Sharma S, Rathi N, Kamal B, Pundir D, Kaur B and Arya S (2010). Conservation

of biodiversity of highly important medicinal plants of India through tissue culture

technology- a review Agric. Biol. J. N. Am., 1(5): 827-833.

310. Sharma N and Chandel KPS (1992). Effects of ascorbil acid on axillary shoot

induction in Tylophora indica (Burm.F.) Merill, Plant Cell Tissue Organ Culture, 29:

109.

311. Shenoy BD, Jeewon R and Hyde KD (2007). Impact of DNA sequence-data on

the taxonomy of anamorphic fungi. Fungal Diversity 26: 1-54.

xxix

312. Shimizu M (2000). Studies on endophytic actinomyces disease resistance of tissue

cultured seedling of rhododendron treated with Streptomyces sp.R-5. The 11th Asia

Conference On Plant Pathology (AC PP), Beijing, China.

313. Shinshi H, Mohnen D and Meins F, Jr. (1987). Regulation of a plant

pathogenesis-related enzyme: inhibition of chitinase and chitinase mRNA

accumulation in cultured tobacco tissues by auxin and cytokinin. Proc. Natl. Acad.

Sci. USA 84:89–93.

314. Shiva V (1996). Protecting our biological and intellectual heritage in the age of

biopiracy. The Research Foundation for Science, Technology and Natural Resources

Policy, New Delhi, India.

315. Singh A, Kandasamy T and Odhav B (2009). In vitro propagation of

Alternanthera sessilis (sessile joyweed), a famine food plant. African J. Biotech.

8(21): 5691-5695.

316. Skoog F and Miller C (1957). Chemical regulation of growth and organ formation

in plant tissues cultured in vitro. pp. 118-140 in Symp. Soc. Exptl. Biol., Number XI,

The Biological Action of Growth Substances.

317. Skoog F and Tsui C (1948). Chemical control of growth and bud formation in

tobacco stem segments and callus cultured in vitro. Am. J. Bot. 35: 782-787.

318. Slankis V (1973). Hormonal relationship in ectomycorrhizae. In: Marks GC,

Kozlowski TT, eds. Ectomycorrhizae. Their ecology and physiology. New York,

USA/London, UK: Academic Press, 232–298.

319. Sood H and Chauhan HS (2009). Development of a low cost micropropagation

technology for an endangered medicinal herb (Picorhiza kurroa) of North-Western

Himalayas. Journal of Plant Sciences, 1-11.

320. Sreenivasaprasad S and Talhinhas P (2005) Genotypic and phenotypic diversity in

Colletotrichum acutatum, a cosmopolitan pathogen causing anthracnose on a wide

range of hosts. Molecular Plant Pathology 6: 361–378.

321. Stein W and Moore SA (1948). A modified ninhydrin reagent for photometric

determination of amino acids related compounds. Journal of Biological Chemistry,

Bethesday, 176: 367-372.

xxx

322. Steward FC, Maper MO and Smith J (1958). Growth and organized development

of cultured cell 11. Organization in culture grown from freely suspended cells. Amer.

J. Bot. 45: 705-708.

323. Stickens D, Tao W and Verbelen JP (1996). A single cell model system to study

hormone signal transduction. Plant Growth Regul 18: 149-154.

324. Stone JK, Polishook JD, White FJR, Bills GM (2004). Endophytic fungi In:

Biodiversity of Fungi Inventory and Monitoring Methods,eds. Mueller, G. F.,Foster,

M. S. pp 241-270. Elsevier Academic Press, London ISBN: 0.12.509951-1.

325. Strobel GA (2003). Endophytes as sources of bioactive products. Microbes and

Infection. 5:535-544.

326. Subathra Devi C and Mohana Srinivasan V (2006). Studies on various

atmospheric microorganisms affecting plant tissue culture explants. American J.

Plant. Physiol. 1(2): 205-207.

327. Summerell BA, Salleh B and Leslie FL (2003). A utilitarian approach to

Fusarium identification. Plant Dis. 87:117-128.

328. Sunderland N and Wells B (1968). Plastid structure and development in green

callus tissues of Oxalis dispar. Ann. Bot. 32: 327-346.

329. Suryanarayanan TS, Venkatesan G and Murali TS (2003). Endophytic fungal

communities in leaves of tropical forest trees: Diversity and distribution patterns.

Current Science, 85(4): 489-93.

330. Suryanarayanan TS, Kumaresan V and Johnson JA (1998). Foliar fungal

endophytes from two species of the mangrove Rhizophora. Can. J. Microbiol., 44,

1003–1006.

331. Suryanarayanan TS and Thennarasan S (2004). Temporal variation in endophyte

assemblages of Plumeria rubra leaves. Fungal Diversity 15: 197-204.

332. Syono K and Furuya T (1972). Effects of cytokinins on the auxin content of

tobacco calluses. Plant Cell Physiol. 13: 843-856.

333. Tan RX, Zou WX (2001). Endophytes: a rich source of functional metabolites.

Natural Product Reports. 18:448-459.

xxxi

334. Taylor JE, Hyde KD and Jones EBG (1999). Endophytic fungi associated with the

temperate palm, Trachycarpus fortunei, within and outside its natural geographic

range. New Phytologist 142: 335-346.

335. Tejavathi DH and Shailaja KS (1999) Regeneration of Plants from the Cultures of

Bacopa monnieri (L.) Pennell. Phytomorphology 49(4): 447-452.

336. Tejesvi MV, Kini KR, Prakash HS, Ven Subbiah and Shetty HS (2007). Genetic

diversity and antifungal activity of species of Pestalotiopsis isolated as endophytes

from medicinal plants. Fungal diversity 24: 37-54.

337. Tejesvi MV, Mahesh B, Nalini MS, Prakash HS, Kini KR, Ven Subbiah and

Shetty HS (2005). Endophytic fungal assemblages from inner bark and twig of

Terminalia arjuna W and A. (Combretaceae). World Journal of Microbiology and

Biotechnology 21: 1535-1540.

338. Telford M, Wise M, Gowri-Shankar V (2005). Consideration of RNA secondary

structure significantly improves likelihood-based estimates of phylogeny: Examples

from the Bilateria. Molecular Biology and Evolution, 22(4):1129-1136.

339. Terzi M and Lo Schiavo F (1990). Developmental mutants in carrot. pp. 391-397

in Nijkamp H.I.J., Van Der Plas I.H.W. & Van Aartrijk J. (eds.) 1990 Progress in

Plant Cellular and Molecular Biology. Proc. VIIth Int. Cong. on Plant Tissue and

Cell Culture. Amsterdam, The Netherlands. 24-29 June 1990. Kluwer Academic

Publishers, Dortrecht, Netherlands.

340. Thomas P, Swarna GK, Patil P and Rawal RD (2008). Ubiquitous presence of

normally non-culturable endophytic bacteria in field shoot-tips of banana and their

gradual activation to quiescent cultivable form in tissue cultures. Plant Cell Tiss

Organ Cult., 93(1):39–54.

341. Thongkantha S, Jeewon R, Vijaykrishna D, Lumyong S, McKenzie EHC and

Hyde KD (2009). Molecular phylogeny of Magnaporthaceae (Sordariomycetes) with

a new species, Ophioceras chiangdaoense from Dracaena loureiroi in Thailand.

Fungal Diversity 34: 157- 173.

342. Thorpe TA and Murashige T (1970). Some histochemical changes underlying

shoot initiation in tobacco callus cultures. Can. J. Bot. 48: 277-285.

xxxii

343. Toledo VM (1995). New paradigms for a new ethnobotany: reflections on the

case of Mexico. In: Schultes RE and Von Reis S (Eds.). Ethnobotany: evolution of a

discipline. Chapman and Hall, London, UK. pp. 75-88.

344. Tommasi F and Scaramuzzi F (2004). In vitro propagation of Ginkgo biloba by

using various bud cultures. Biologia Plantarum. 48(2): 297-300.

345. Torrey JG (1963). Cellular patterns in developing roots. pp. 285- 314 in Symp.

XVII Soc. Exp. Biol., Cambridge University Press.

346. Toyomasu T, Tsuji H, Yamane H, Nakayama M, Yamaguchi I, Murofushi N,

Takahashi N and Inoue Y (1993). Light effects on endogenous levels of gibberellins

in photoblastic lettuce seeds. Plant Growth Regulation 12: 85–90.

347. Tsagkogeorga G, Turon X, Hopcroft RR, Tilak MK, Feldstein T, Shenkar N,

Loya Y, Huchon D, Douzery EJ and Delsuc F (2009). An updated 18S rRNA

phylogeny of tunicates based on mixture and secondary structure models. BMC

Evolutionary Biology, 9:187.

348. Tsumoto H, Ra M, Samejima K, Taguchi R and Kohda K (2008). Chemical

derivatization of peptides containing phosphorylated serine/threonine for efficient

ionization and quantification in matrix-assisted laser desorption/ionization time-of-

flight mass spectrometry. Rapid Communications in Mass Spectrometry. 22 (7): 965–

972.

349. Tudzynski B and Sharon A (2002). Biosynthesis, biological role and application

of fungal phytohormones, p. 183–211. In H. Osiewacz (ed.), The Mycota. A

comprehensive treatise on fungi as experimental systems for basic and applied

research, vol. X. Industrial applications. Springer-Verlag, Berlin, Germany.

350. Udaya Prakash NK (2004). Indoor molds: isolation and identification, Color

wings (M) Pvt. Ltd. Chennai, India.

351. Vadodaria HK, Samantaray S and Maiti S (2007). Micropropagation of

Glycyrrhiza glabra Linn. An important medicinal plant. Journal of Cell and Tissue

Research. 7(1): 921-926.

352. Vaillancourt and Hanau (1991). A method for genetic analysis of Glomerella

graminicola from maize. Phytopathology 81: 530-534.

xxxiii

353. Vanisree M and Tsay HS (2004). Plant cell cultures — an alternative and efficient

source for the production of biologically important secondary metabolites. Int J Appl

Sci Eng. 2: 29–48.

354. Vankova R, Gaudinova A, Kaminek M and Eder J (1992). The effect of

interaction of synthetic cytokinin and auxin on production of natural cytokinins by

immobilized tobacco cells. pp. 47-51 in Kamínek M., Mok D.W.S., Zazímalová E.,

(eds). Physiology and Biochemistry of Cytokinins in Plants. SPB Academic

Publishing, The Hague, The Netherlands,.

355. Venkatchalam PN, Geetha A, Kandelwal MS, Shaila G and Lakshmi S (1999).

Induction of direct somatic embryogenesis and plant regeneration from mature

cotyledon explants of Arachis hypogaea L. Plant Sci. 77: 269-273.

356. Veronique C, Rudy M and Amir S (2009) CgOpt1, a putative oligopeptide

transporter from Colletotrichum gloeosporioides that is involved in responses to

auxin and pathogenicity. BMC Microbiology, 9:173

357. Verpoorte R, Contin A and Memelink J (2002). Biotechnology for the production

of plant secondary metabolites. Phytochem Rev, 1:13–25.

358. Vieitez AM and Vieitez ML (1980). Culture of chestnut shoots from buds in vitro.

Plant Physiol. 55: 83-84.

359. Vines G (2004). Herbal harvests with a future: towards a sustainable source for

medicinal plants, Plant life International. www.plantlife. org.uk

360. von Reumont B, Meusemann K, Szucsich N, Dell’Ampio E, Gowri-Shankar V,

Bartel D, Simon S, Letsch H, Stocsits R, Luan Y-x, Wägele JW, Pass G, Hadrys H

and Misof B (2009). Can comprehensive background knowledge be incorporated into

substitution models to improve phylogenetic analyses? A case study on major

arthropod relationships. BMC Evolutionary Biology, 9(1):119.

361. Wang Y, Guo LD and Hyde KD (2005). Taxonomic placement of sterile

morphotypes of endophytic fungi from Pinus tabulaeformis (Pinaceae) in northeast

China based on rDNA sequences. Fungal Diversity 20: 235-260.

362. Warren RC (1976). The occurrence of microbes among buds of deciduous trees.

Eur. J. Forest Pathol. 6: 38-45.

xxxiv

363. Wawrosch C and Kopp B (1999). Application of plant tissue culture in protection

and domestication of rare and endangered medicinal plants. In Vitro Cell. Dev. Biol.

Plant. 35: 180-181.

364. Wawrosch C, Malia RR and Kopp B (2001). Clonal propagation of Lilium

nepalense D. Don, a threatened medicinal plants of Nepal. Plant Cell Rep. 10: 457-

460.

365. Weller R and Leifert C (1996). Transmission of Trichophyton interdigitale via an

intermediate plant host. Br. J. Dermatol. 135:656-657.

366. White PR (1933). Results of preliminary experiments on the culturing of isolated

stem tips of Stellaria media. Protoplasma 19: 97-116.

367. White TJ, Bruns T, Lee S and Taylor J (1990). Amplification and direct

sequencing of fungal ribosomal RNA genes for phylogenetics. In: PCR Protocols: A

Guide to Methods and Applications. (eds. M.A. Innis, D.H. Gelfand, J.J. Snisky and

J.J. White) Academic Press, San Diego: 315-322.

368. Wickson M and Thimann KV (1958). The antagonism of auxin and kinetin in

apical dominance. Physiol. Plant. 11: 62-74.

369. Wikee S, Cai L, Pairin N, McKenzie EHC, Su Y-Y, Chukeatirote E, Thi HN,

Bahkali AH, Moslem, MA, Abdelsalam K and Hyde KD (2010). Colletotrichum

species from Jasmine (Jasminum sambac). Fungal Diversity: DOI 10.1007/s13225-

010-0049-x.

370. Wilcox EJ, Selby C and Wain RL (1981). The cytokinin activities of 6- -

alkylbenzyloxy-purines. Ann. Appl. Biol. 97: 221-226.

371. Witztum A, Keren O and Even-Chen Z (1978). The effect of ultraviolet radiation

and sucrose on IAA levels in Spirodela oligorhiza. Annals of Botany 42: 595–598.

372. Wozny A, Gwodz E and Sweykowska A (1973). The effect of 3- indoleacetic acid

on the differentiation of plastids in callus culturs of Cichorium intybus L.

Protoplasma 76: 109-114.

373. Xiao PG and Yong P (1998). Ethnopharmacology and research on medicinal

plants in China. In : Prendergast HDV, Etkin NL, Harris DR and Houghton PJ (Eds.).

Plants for food and medicine. Proc. Joint Conference of the Society for Economic

xxxv

Botany and the International Society for Ethnopharmacology, London, 1-6 July 1996,

Royal Botanic Gardens, Kew, UK. pp. 31-39.

374. Yamada T, Palm CJ, Brooks B and Kosuge T (1985). Nucleotide sequences of the

Pseudomonas savastanoi indole acetic acid genes show homology with

Agrobacterium tumefaciens T-DNA. Proc. Natl. Acad. Sci. USA 82:6522–6526.

375. Yemm EW and Willis AJ (1954). The estimation of carbohydrates in plant

extracts by anthrone. The Biochemistry Journal, London, 508-514.

376. Yurekli F, Geckil H and Topcuoglu F (2003). The synthesis of indole-3-acetic

acid by the industrially important white-rot fungus Lentinus sajor-caju under different

culture conditions. Mycol. Res. 107 (3): 305–309.

377. Zapata FJ, Khush GS, Crill JP, Neu MR, Romero RO, Torrizo LR and Alejar M

(1983). Rice anther culture at IRRI. pp. 27-86 in Cell and Tissue Culture Techniques

for Cereal Crop Improvement. Science Press Beijing, China. Gordon and Breach

Science Publications, Inc., New York.

378. Zazimalova E, Brezinova A, Holik J and Opatrny Z (1996). Partial auxin

deprivation affects endogenous cytokinins in an auxin-dependent, cytokinin-

independent tobacco cell strain. Plant Cell Rep. 16: 76-79

379. Zhang HW, Song YC and Tan RX (2006). Biology and chemistry of endophytes.

Natural Product Reports. 23:753-771.

380. Zhang Y, Fournier J, Pointing SB and Hyde KD (2008). Are Melanomma pulvis-

pyrius and Trematosphaeria pertusa congeneric? Fungal Diversity 33: 47-60.

381. Zhao GZ, Liu XZ and Wu WP (2007). Helicosporous hyphomycetes from China.

Fungal Diversity 26: 313-524.

382. Zhu GS, Yu ZN, Gui Y and Liu ZY (2008). A novel technique for isolating orchid

mycorrhizal fungi. Fungal Diversity 33: 123-137.

383. Zieslin N and Geller Z (1983) Studies with Liatris spicata Willd. 1. Effect of

temperature on sprouting, flowering and gibberellins content. Annals of Botany 52:

849–853.