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Prokaryotic Diversity
18 Phyla?
80Phyla – uncultured
Aquiflex – most phylogenetic ancient
Thermophiles – ancient?
Fig. 15-1
Aquifex
Thermodesulfobacterium
Thermotoga
Green nonsulfurbacteria
Deinococci
Green sulfurbacteriaGreen sulfurbacteria
Spirochetes
Flavobacteria
Deferribacter
Cytophaga
Planctomyces/Pirellula Verrucomicrobia
Chlamydia
Cyanobacteria
Actinobacteria
Gram-positivebacteria
Nitrospira
Proteobacteria
ProteobacteriaLargest and most metabolically diverse
Purple Sulfur BacteriaUse Hydrogen sulfide
α, β, γ subdivisions
Purple Nonsulfur BacteriaPhotoheterotrophy
Aerobic respiration
Nitrifying bacteriaChemolithotrophs
Nitrosomonas, Nitrobacter
Sulfur Oxidizing BacteriaThiobacillus, Beggiatoa
Sulfuric acid produced
Methanotrophs
Anaerobic Archaea –not bacteria
Aerobic ChemoorganotrophsPseudomonas and pseudomonads
PseudomonadsCommon genera: Pseudomonas, Xanthomonas,Burkholderia, GluconobacterMetabolically diverse -100 substratesPlant and human pathogensFluorescent - burn patientsBurkholderia - gandersXanthomonas – soft root vegetables
Zymomonas FermentsAlcohol production in the tropic
Acetic Acid Bacteria
Acetobacter, GluconobacterAlcohol → Acetic acid and Cellulose?
Nitrogen Fixing Bacteria
Azotobacter, BeijerinckiaNitrogenase is oxygen sensitiveCysts, capsule, and poly-β-hydroxybuytrate
Neisseria and Relatives
Neisseria, Acinetobacter, Chromobacterium, Moraxella
Some human pathogensMost oxidase positive
Enteric Bacteria
Escherichia, Salmonella, Proteus, EnterobacterFacultative anaerobes, peritrichous flagella,Gut flora, human pathogens
Escherichia
Universal inhabitant of warm blooded animalsVitamin synthesisRarely pathogenic
Salmonella and Shigella
Usually pathogenicSalmonella found in some cold blood animals
Proteus
swarming
Butandiol fermentersEnterobacter, Klebsiella, Serratia
Vibrio and Photobacterium
Oxidase positivePolar flagellaFermentativeAquaticBioluminescent
Rickettsia
Small intracellular parasitesHuman diseasesArthropod vectors
Morphologically Unusual ProteobacteriaSpirillum, Budding Bacteria, Sphaerotilus, Bdellovibrio
Gliding Myxobacteria
Form multicellular fruiting bodiesGlide with slime trails
Sulfate Reducing Bacteria
40 generaAnaerobesAnaerobic respirationDesulfovibrio
Epsilonproteobacteria
Human PathogensCampylobacter, HelicobacterAbundant in the environmentHydrothermal ventsEpibionts of tube worm and shrimp
Word List
Aquiflexus18-80 phylaProteobacteriaPurple sulfur bacteriaPurple non-sulfur bacteriaNitrifying bacteriaSulfur oxidizing bacteriaMethanotrophsPseudomonadsPseudomonasFluorescentXanthomonas
ZymomonasAcetic acid bacteriaNitrogen fixing bacteriaAzotobacterBeijerinckiaNeisseriaEntericEscherichiaSalmonellaShigellaProteusVibrioRickettsia
Word list 2
SphaerotilusBdellovibrioMyxobacteriaDesulfovibrioEpsilonproteobacteriaEpibionts