54
Elena Litchman Michigan State University Linking traits and ecological niches to predict ecoevolu;onary responses of phytoplankton to global change

Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

  • Upload
    dangthu

  • View
    219

  • Download
    0

Embed Size (px)

Citation preview

Page 1: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Elena  Litchman  Michigan  State  University  

Linking  traits  and  ecological  niches  to  predict  eco-­‐evolu;onary  responses  of  

phytoplankton  to  global  change  

Page 2: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&
Page 3: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Climate  Change  Impacts  on  Phytoplankton  

•  Increase  in  CO2  (acidifica;on)  •  Increase  in  temperature  •  Change  in  stra;fica;on,  nutrient  and  light  availability  

•  Changes  in  other  trophic  levels  (predators  and  parasites)    

Page 4: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Key  Ques;ons  

•  How  do  abio;c  constraints  and  bio;c  interac;ons  shape  community  structure  and  diversity?  

•  How  will  communi;es  re-­‐organize  under  changing  condi;ons  (global  environmental  change?)  

•  How  does  community  structure  affect  ecosystem  func;oning?  

Page 5: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Responses  of  Phytoplankton  Communi;es  to  Climate  Change  

•  Dispersal  •  Phenotypic  plas;city  •  Selec;on  on  new  muta;ons  •  Selec;on  on  standing  gene;c  (func;onal)  varia;on  

•  Species  sor;ng  (through  compe;;on)  

Page 6: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Responses  of  Phytoplankton  Communi;es  to  Climate  Change  

•  Dispersal  •  Phenotypic  plas;city  •  Selec;on  on  new  muta;ons  •  Selec;on  on  standing  gene;c  (func;onal)  varia;on  

•  Species  sor;ng  (through  compe;;on)  

Evolu;on  

Page 7: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Ecological  Niches  of  Phytoplankton  

Hutchinsonian  hypervolume    

G.  Evelyn  Hutchinson  

Page 8: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Ecological  Niches  of  Phytoplankton  Niche  axes  • Nutrients  • Light  • pH  • Temperature  • Predators,  parasites,  etc.    

Fundamental  Niche—set  of  abio;c  condi;ons  where  a  species  can  persist    Realized  Niche—the  por;on  of  the  fundamental  niche  in  which  a  species  has  posi;ve  popula;on  growth  rates,  in  the  presence  of  bio;c  interac;ons  (compe;;on)  

Page 9: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Sta;s;cal  Niche  Characteriza;on  Problems:  not  mechanis;c,  niche  changes  (contrac;on,  expansion  or  shiW)  

•  Realized  niche—due  to  ecological  interac;ons  •  Fundamental  niche—due  to  evolu;onary  changes    How  to  determine  if  a  niche  is  sta;c  or  shiWs?  What  niche  dimensions  are  more  likely  to  shiW?    Can  test  for  niche  shiWs:  •  Predict  past  species  distribu;ons  from  models  fiZed  under  current  climate  condi;ons  or  vice  versa  

•  Use  SDMs  to  predict  distribu;ons  in  different  regions  

Pearman  et  al.  2008  

Page 10: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Ecological  Niche  of  Phytoplankton  

Environmental  factor  1  or  resource  1  

Environmental  factor  2  or  resource  2  

Present  range  

Species  A  niche  

Page 11: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Linking  Niche  and  Traits  

Environmental  factor  1  or  resource  1  

Environmental  factor  2  or  resource  2  

Present  range  

Species  A  niche  

Growth  or  mortality  rate  

Resource  R  €

µ = µmaxR

R + k−m

m  

RA*  

RA* =mk

µmax −m

Page 12: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Global  Change  Effects  on  Niche    

Environmental  factor  1  or  resource  1  

Environmental  factor  2  or  resource  2  

Present  range  

Future  range    

Species  A  niche  

Page 13: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Environmental  factor  1  or  resource  1  

Environmental  factor  2  or  resource  2  

Present  range  

Future  range    

Species  A  niche  

Growth  or  mortality  rate   m  

Global  Change  Effects  on  Niche    

Resource  R  RA*  

Page 14: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Environmental  factor  1  or  resource  1  

Environmental  factor  2  or  resource  2  

Present  range  

Future  range    

Future  II  range    

Species  A  niche  

Global  Change  Effects  on  Niche    

Page 15: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Environmental  factor  1  or  resource  1  

Environmental  factor  2  or  resource  2  

Present  range  

Future  I  range    

Future  II  range    

Species  A  niche  

Growth  or  mortality  rate   m  

Global  Change  Effects  on  Niche    

Resource  R  RA*  

Page 16: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Environmental  factor  1  or  resource  1  

Environmental  factor  2  or  resource  2  

Present  range  

Future  I  range    

Future  II  range    

Species  A  niche  

Growth  or  mortality  rate   m  

Species  Replacement  Under  Global  Change  

Resource  R  

Species  B  niche  

RA*  RB*  

Species  B  is  beZer  compe;tor  RB*<RA*    

Page 17: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Trade-­‐offs  Between  Traits  

0.0

0.5

1.0

1.5

2.0

2.5

3.0

3.5

4.0

0 1 2 3 4 5 6 7 8

KP

mo

l)

KN (µmol)

R2=0.36  (p=0.03)  

Half-­‐satura;on  constants  for  N  and  P  

Page 18: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Three-­‐way  trade-­‐off  

Edwards  et  al.  Ecology  2011    

Grazer  resistance  

Nitrogen  compe;;ve  ability  

Phosphorus  compe;;ve  ability  

Page 19: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Key  Phytoplankton  Traits,  Mul;tude  of  Poten;al  Trade-­‐offs  

Litchman  and  Klausmeier  2008  Ann.  Rev.  Ecol.  Evol.  Syst.    

Page 20: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Environmental  factor  1  or  resource  1  

Environmental  factor  2  or  resource  2  

Present  range  

Future  II  range    Growth  or  mortality  rate   m  

Trait  Evolu;on  and  Niche  ShiW  Under  Global  Change  

Resource  R  RA1*  RA2*  

Genotype  A2  is  beZer  compe;tor  RA2*<RA1*    

New  species  A  niche    

Page 21: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Ways  to  Explore  Trait  and  Niche  Evolu;on  

•  Adap;ve  dynamics  models,  include  bio;c  interac;ons  (compe;;on)  

•  Evolu;on  experiments  with  individual  species  and  in  community  context  

Page 22: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Temperature change"Present-2100"

!

Warming  at  least  2  -­‐  4°C  in  most  of  the  ocean  

Page 23: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Thermal  responses  of  phytoplankton  

Page 24: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Data analysis"

•  Collected  published  data/curves  for  194  phytoplankton  isolates  across  >100  different  loca;ons  from  76°N  to  75°S    

•  Fit  growth  func;on  to  the  curves  •  Determined  op;ma  and  niche  widths  

Page 25: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Thermal tolerance curve"

Topt  

Niche  width  

Page 26: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Strong latitudinal gradient in optimal temperature"

Thomas  et  al.  Science  2012  

Page 27: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Adapta;on  to  mean  ambient  temperature  

Thomas  et  al.  Science  2012  

Page 28: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Adap;ve  Dynamics  Approach  (a  trait-­‐based  approach  to  evolu;onary  ecology)  

Eco-physiological traits &

trade-offs Abiotic factors

Growth rate of invader vs resident (competition)

Evolutionarily Stable Strategy (ESS)

Page 29: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Eco-­‐evolu;onary  dynamics  

Page 30: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Observed  and  predicted  temperature  op;ma  

Thomas  et  al.  Science  2012  

Page 31: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Size  Distribu;on  in  Freshwater  and  Marine  Diatoms  

Ethmodiscus rex, 1-3 mm diameter!

0

2

4

6

8

10

freshwater marine

Log c

ell

volu

me (µm

3)

Cyclotella

Page 32: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Litchman  et  al.  2009  PNAS  

ESS  (N  limita;on)  at  different  fluctua;on  periods,  mixed  layer  depth  and  sinking  

Page 33: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Temperature  change  Present-­‐2100  

!

Page 34: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

ShiWs  in  Fundamental  Thermal  Niche  

Trichodesmium  erythraeum  Calcidiscus  leptoporus  

Page 35: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Potential diversity changesdue to shifts in thermal niches"

!

Page 36: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Dispersal  

Chust  et  al.  Glob  Ecol  Biogeogr  2012  

Immigra;on  rate  AMT  data  

Page 37: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Phenotypic  Plas;city  

•  Important  in  all  organisms    

•  Not  much  is  known  how  thermal  traits  change  due  to  acclima;on  

Irradiance  

Topt  

Thomas  et  al.  in  prep.  

Page 38: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Selec;on  on  New  Muta;ons:  Evolu;on  Experiments  

 

Different  thermal  regimes  WARMER    (above  Topt)  

Thalassiosira  pseudonana  

Topt  

Page 39: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Selec;on  on  New  Muta;ons:  Evolu;on  Experiments  

 

Topt  change   Niche  width  change  

Thalassiosira  pseudonana  

What  is  the  gene;c  basis  of  thermal  adapta;on?  

Increase  in  growth  rate  

Possible  adapta;on  scenarios  

Page 40: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Selec;on  on  new  muta;ons:  model  

-1 0 1 2

-2

-1

1

2

∂N∂t

= gN +µ k( "x∫ )N( "x )d "x − N( )

g,  fitness  

muta;on  kernel  k(x)  

x,  trait  

Direc;onal  selec;on  

Page 41: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Dynamics  of  adapta;on:  jumps  

t,  ;me  

x,  trait  

100 120 140 160 180 2000.0

0.2

0.4

0.6

0.8

1.0

Page 42: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Adap;ve  jumps:  data      

Lenski  and  Travisano  PNAS  1994  

Evolu;on  of  glucose-­‐limited  E.  coli  

Page 43: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Adap;ve  jumps:  data      

Toprak  et  al.  Nature  Gen.  2012  

Evolu;on  of  an;bio;c  resistance  (E.  coli)  

resistance  

Increasing  an;bio;c  concentra;on  

Page 44: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Adap;ve  jumps:  data      

Toprak  et  al.  Nature  Gen.  2012  

Evolu;on  of  an;bio;c  resistance  (E.  coli)  

resistance  

Insights  into  evolu;on  under  climate  change  

Page 45: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Selec;on  on  standing  varia;on  

Thalassiosira  pseudonana   Thalassiosira  rotula  

Boyd  et  al.  PLoS  ONE  2013    

Page 46: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Intraspecific  vs  interspecific  varia;on  in  temperature  op;ma  

Species sorting?"

Boyd  et  al.  PLoS  ONE  2013    

6  

6  4  

3  3  

Page 47: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Community  Responses  to  Climate  Change:  Eco-­‐Evolu;onary  Models  

•  Need  to  include  mul;ple  mechanisms  (phenotypic  plas;city,  dispersal,  evolu;on,  species  sor;ng)  

•  Example:  Norberg  et  al.  2012  

Page 48: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Different  contribu;on  of  Ecological  and  Evolu;onary  Processes  

Norberg  et  al.  Nature  Climate  Change  2012  

Page 49: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Different  contribu;on  of  Ecological  and  Evolu;onary  Processes  

Norberg  et  al.  Nature  Climate  Change  2012  

Dispersal  

Gene;c  variance  

Page 50: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Different  contribu;on  of  Ecological  and  Evolu;onary  Processes  

Norberg  et  al.  Nature  Climate  Change  2012  

Dispersal  

Gene;c  variance  

Species  abundances  

Page 51: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Even  More  Complexity  

•  Trade-­‐offs  among  traits  (pairwise,  mul;dimensional)  

Temperature  op;mum    

Niche  width  

Page 52: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Summary  

•  Ecological  niches  can  be  characterized  using  traits—more  mechanis;c  descrip;on  

•  Describing  trait  dynamics  and  evolu;on  can  help  predict  niche  dynamics  and  evolu;on  

Page 53: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

Summary  (cont’d)  •  Temperature  op;ma  in  phytoplankton  exhibit  strong  la;tudinal  paZern  and  species  appear  adapted  to  local  temperature  regimes  

•  In  the  absence  of  evolu;on,  species  diversity  may  drama;cally  decline  in  the  tropics  due  to  warming  

•  Dispersal,  evolu;onary  adapta;on  and  species  sor;ng  may  counteract  nega;ve  effects  of  rising  temperature  and  other  stressors  

•  Need  to  get  es;mates  of  various  components  of  eco-­‐evolu;onary  responses  to  parameterize  models  

Page 54: Linking&traits&and&ecological&niches&to& predicteco9evolu ... · Log cell volume µ m 3) Cyclotella ... Potential diversity changes due to shifts in thermal niches"! Dispersal& Chust&etal.&Glob&

What  we  can  do:  

• Collect  species  distribu;on  data  and  trait  informa;on  and  map  ecological  niches  • Combine  sta;s;cal  and  mechanis;c  niche  descrip;ons  • Develop  new  models  of  (phyto)plankton  community  organiza;on  and  evolu;on  • Conduct  eco-­‐evolu;onary  experiments  to  assess  (phyto)plankton  responses  to  changing  condi;ons      -­‐-­‐In  monocultures    -­‐-­‐In  communi;es  and  food  webs