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I. Zonation
C. Depth Zones2. Benthic
c. Sublittoral (Mean low water to edge of continental shelf)• Region of sea floor underlying neritic zone (8%)• Character of zone changes with depth and distance
offshore: concentrations of benthic algae decrease, hard substrate replaced by soft substrate
• Highly productive; supports higher densities of organisms than deeper zones
• Vast majority of large benthic species live in this zoned. Bathyal (200–4000 m)
• Essentially no primary production• Organismal densities decrease with increasing depth• Within this zone, physical parameters change
dramatically: light availability, temperature, [O2]• Covers 16% of sea floor
I. Zonation
C. Depth Zones2. Benthic
c. Abyssal (4000-6000 m)• Largest ecological region on earth• Covers 75% of sea floor (>50% of earth’s surface)• Light virtually absent, pressure high, cold, food scarce
and somewhat unpredictable in space & time• Organisms difficult to study and poorly known,
compared to shallow-living relatives
d. Hadal (6000–11,000 m)• Oceanic trenches• Trenches may accumulate organic detritus (food) that
may form basis of trench food webs• Organisms difficult to study and not well known
II. Ocean Circulation
A.A. Surface CurrentsSurface Currents• Driven by winds
• Surface currents deflected to right/left of wind direction by Coriolis Effect
• Anticyclonic gyres in major basins• Clockwise in N. Hemisphere• Counterclockwise in S. Hemisphere
Fig. 4-14
Fig. 4-15
II. Ocean Circulation
A.A. Surface CurrentsSurface Currents• Driven by winds
• Surface currents deflected to right/left of wind direction by Coriolis Effect
• Anticyclonic gyres in major basins• Clockwise in N. Hemisphere• Counterclockwise in S. Hemisphere
• Currents transport heat from equator to poles• Why is Antarctica covered with ice today?
• Surface temperatures higher on western margins of ocean basins vs. eastern margins
II. Ocean Circulation
B. Vertical Circulation• Thermohaline circulation
• Driven by unstable water column with denser water at surface
• Drives Great Ocean Conveyor
Fig. 4-16
II. Ocean Circulation
B. Vertical Circulation• Thermohaline circulation
• Driven by unstable water column with denser water at surface
• Drives Great Ocean Conveyor
• Upwelling and Downwelling• Driven by wind
Fig. 4-22
III. Marine Microbes
A. Marine Viruses• Not alive in traditional sense
B. Marine Bacteria• Organized by nutritional mode and taxon
C. Archaea• “Extremophiles”
D. Eukarya• Fungi• Stramenopiles• Haptophytes• Alveolates• Choanoflagellates• Amoeboid Protozoans
Fig. 6-1
III. Marine Microbes
A. Marine Viruses• Virion outside of host cell• 10x as abundant as marine bacteria
• Up to 1010 virions per liter
• DNA or RNA encapsulated in protein capsid• DNA viruses
• Helical tail• Two basic life cycles: lytic, lysogenic• Ecologically important
• Facilitate breakdown of microbial blooms• Alter food/nutrient availability• Cause diseases in marine animals
Fig. 6-3
Fig. 6-2
III. Marine Microbes
A. Marine Viruses• Virion outside of host cell• 10x as abundant as marine bacteria
• Up to 1010 virions per liter
• DNA or RNA encapsulated in protein capsid• DNA viruses
• Helical tail• Two basic life cycles: lytic, lysogenic• Ecologically important
• Facilitate breakdown of microbial blooms• Alter food/nutrient availability• Cause diseases in marine animals
Fig. 6-4
III. Marine Microbes
A. Marine Viruses• Virion outside of host cell• 10x as abundant as marine bacteria
• Up to 1010 virions per liter
• DNA or RNA encapsulated in protein capsid• DNA viruses
• Helical tail• Two basic life cycles: lytic, lysogenic• Ecologically important
• Facilitate breakdown of microbial blooms• Alter food/nutrient availability• Cause diseases in marine animals
III. Marine Microbes
B. Marine Bacteria• Many shapes - spheres, coils, rods, ringsMany shapes - spheres, coils, rods, rings• Very small cells (usually less than 1 μm across)Very small cells (usually less than 1 μm across)
• May be very large (by bacterial standards)
Fig. 6-5
Coccus Bacillus Spirillum
III. Marine Microbes
B. Marine Bacteria1. Autotrophic
a. Photosynthetic• Energy from sunlight• Contain chlorophyll or other photosynthetic pigments• Important primary producers in open oceani. Cyanobacteria (aerobic) – Some perform nitrogen
fixationii. Purple and green photosynthetic bacteria (anaerobic)
b. Chemosynthetic• Obtain energy from chemical compounds• Ex: Hydrogen, hydrogen sulfide, ammonium ion• Often anaerobic, may be symbiotic
2. Heterotrophic• Most are decomposers (break down organic material)• Important in nutrient cycling• May be symbiotic
Fig. 6-8
III. Marine Microbes
B. Marine Bacteria1. Autotrophic
a. Photosynthetic• Energy from sunlight• Contain chlorophyll or other photosynthetic pigments• Important primary producers in open oceani. Cyanobacteria (aerobic) – Some perform nitrogen
fixationii. Purple and green photosynthetic bacteria (anaerobic)
b. Chemosynthetic• Obtain energy from chemical compounds• Ex: Hydrogen, hydrogen sulfide, ammonium ion• Often anaerobic, may be symbiotic
2. Heterotrophic• Most are decomposers (break down organic material)• Important in nutrient cycling• May be symbiotic
Fig. 6-11
III. Marine Microbes
B. Marine Bacteria1. Autotrophic
a. Photosynthetic• Energy from sunlight• Contain chlorophyll or other photosynthetic pigments• Important primary producers in open oceani. Cyanobacteria (aerobic) – Some perform nitrogen
fixationii. Purple and green photosynthetic bacteria (anaerobic)
b. Chemosynthetic• Obtain energy from chemical compounds• Ex: Hydrogen, hydrogen sulfide, ammonium ion• Often anaerobic, may be symbiotic
2. Heterotrophic• Most are decomposers (break down organic material)• Important in nutrient cycling• May be symbiotic
Fig. 6-14
III. Marine Microbes
C. Archaea• Resemble bacteria superficially but may be more closely
related to eukaryotes than bacteria• Very small cells (0.1 – 15 μm)• Heterotrophs or autotrophs (photo- or chemosynthetic)
• Many methanogens• Some fix nitrogen
• Important decomposers• Abundant in sediments
• Extremophiles• Deep sea (barophiles)• Hydrothermal vents (thermophiles)• Salt ponds/lakes (halophiles)• Antarctic (psychrophiles)• Acid/Alkaline lakes (acidophiles)
III. Marine Microbes
D. Eukarya1. Fungi
• Unicellular or multicellular (produce hyphae)• Body = mycelium• Mostly microscopic
• Cell walls made of chitin• Heterotrophic
• Important decomposers, esp. of wood• Some pathogenic forms• Host to algae in lichens
Fig. 6-17
III. Marine Microbes
D. Eukarya2. Stramenopiles (Heterokonts)
• Diverse group• Bear two different flagella at some point in life cycle
• One complex with mastigionemes• Photosynthetic and nonphotosynthetic forms
• Photosynthetic = Ochrophytes
a. Diatoms
b. Silicoflagellates
Fig. 6-18
III. Marine Microbes
D. Eukarya2. Stramenopiles (Heterokonts)
a. Diatoms• Unicellular; may form chains• Cell enclosed by silica frustules (test)• Shape: centric or pennate• Test usually perforated and ornamented with
spines or ribs (Why?)• Perforations allow gases, nutrients, waste
products to pass through test to cell• Important open-water primary producers,
especially in temperate and polar regions
Centric
PennateFig. 6-19
Fig. 6-20
III. Marine Microbes
D. Eukarya2. Stramenopiles (Heterokonts)
b. Silicoflagellates• Silica test, usually with spines• One or two flagella• Especially abundant in• cold water
Fig. 6-21
III. Marine Microbes
D. Eukarya2. Haptophytes
• Two similar simple flagella
a. Coccolithophores• Covered by calcium carbonate coccoliths• Abundant and important in tropics• Coccoliths may be important in sediments
Fig. 6-23
Fig. 6-24
III. Marine Microbes
D. Eukarya3. Alveolates
• Membranous sacs (alveoli) beneath cell membranes
a. Dinoflagellates
b. Ciliates
Fig. 6-25
III. Marine Microbes
D. Eukarya3. Alveolates
a. Dinoflagellates• Motile forms possess two flagella• Some lack flagella• May be autotrophic, heterotrophic (~50%),
mixotrophic• Some symbiotic (e.g. zooxanthellae)
• Two basic forms• Thecate – Covered with theca made of cellulose
plates, sometimes with spines (Why?)• Athecate – Less common
Fig. 6-26
III. Marine Microbes
D. Eukarya3. Alveolates
b. Ciliates• Important small heterotrophs
Fig. 6-27
III. Marine Microbes
D. Eukarya4. Choanoflagellates
• Solitary or colonial free-living heterotrophs• Best-known from surface waters• Important grazers on bacteria• Closest living relatives of metazoans
Fig. 6-28
III. Marine Microbes
D. Eukarya5. Amoeboid Protozoans
a. Foraminiferans• Test (shell) made of calcium carbonate (CaCO3) or
agglutinated sediment particles - Fossil tests used to age geological deposits
• May have multiple chambers - Tests increase in size as organism grows
• Feed by extending pseudopodia through pores in test - Trap bacteria and other small organisms/detritus - Some have bacterial symbionts
• Pelagic forms (calcareous) - Often have spines - Tests may form foraminiferan oozes, esp. in shallow water beneath tropics
• Benthic forms (calcareous or agglutinated) - Calcareous tests can be important sources of sand for beaches
http://earthguide.ucsd.edu/earthguide/imagelibrary/orbulinauniversa.html
http://www.ucl.ac.uk/GeolSci/micropal/foram.html
III. Marine Microbes
D. Eukarya5. Amoeboid Protozoans
b. Radiolarians• Test made of silica (SiO2)
• Tests may form radiolarian oozes, esp. in deep water in temperate and polar regions
• Feed by extending pseudopodia through pores in test
• Trap diatoms and other small organisms/detritus (Why diatoms?)
Fig. 6-30