34
1 HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Function

HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

  • Upload
    others

  • View
    0

  • Download
    0

Embed Size (px)

Citation preview

Page 1: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

1

HST 721 Mouse Lab:Noninvasive Assessment of Cochlear Function

Page 2: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

2

DPOAEs

ABRs

Flowchart of the cochlear signal generationDPOAEs assess all structures except IHCs and NeuronsABRs assess all structures

ABRs vs. DPOAEs

Page 3: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

3

DPOAEs:Distortion Product Otoacoustic Emissions

Page 4: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

4

INP

UT

OUTPUT

DPOAEs: Source of the Nonlinearity

Page 5: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

5

Cochlear Location BaseApex

f1

Cochlear Location BaseApex

f1 f2

Cochlear Location BaseApex

f1 f2

2f1-f2

Cochlear Location BaseApex

f1

f22f1-f2

DPOAEs: Place of cochlear generation

Page 6: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

6

QuickTime™ and a YUV420 codec decompressor are needed to see this picture.

DPOAEs: Source of Amplification

Page 7: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

7

DPOAEs: How they are measured in humans

Page 8: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

8

DPOAEs: How they are measured in the lab

Page 9: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

9

DPOAEs: How they are measured in the lab

Page 10: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

10

DPOAEs: What you will see in mice

-20

-30

-10

0

10

20

30

30

10 20 30 40 50 60 70 80 90

Primary Tone Level (dB SPL)

Noise Floor

DP amplitude vs. level functions in 3 ears1 pair of primaries at many SPLs

Ear-canal spectrum for 1 pairof primaries at 1 SPL

f2f1

2f1-f2

Noise Floor

“Threshold”

Page 11: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

11

DPOAEs: What you can compute in mice

DP iso-response functions“Threshold” vs frequency

Page 12: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

12

DPOAEs: Assess OHCs and all “upstream elements”

Page 13: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

13

ABRs:Auditory Brainstem Responses

Page 14: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

1414

Click Stimulus

Single-Fiber

Responses

Compound Action

Potential (CAP)

CAPs: Dominated by auditory nerve response

Page 15: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

1515

ABRs: Include potentials from several brainstem nuclei

-

Middle Ear

AuditoryMid-Brain &Brainstem

Auditory Cortex

Inner Ear

Click Stimulus

Auditory Brainstem

Response (ABR)

Page 16: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

1616

ABRs: Which cells dominate the peaks ?

-

Middle Ear

AuditoryMid-Brain &Brainstem

Auditory Cortex

Inner Ear

VCN

SOC

Page 17: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

1717

ABRs: Tone pips vs. Clicks

Page 18: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

1818

Single-Fiber Recordings

ABRs: Frequency selectivity of tone pips

Page 19: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

1919

ABRs: Tone pips vs. Clicks

Page 20: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

2020

ABRs: Signal Averaging

Noise decreases in proportion to √n,

where n = # averages

Near threshold, 1024 averages are typically

acquired for ABR.

Page 21: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

2121

Response amplitude grows with increasing

stimulus SPL

ABRs: What is Threshold?

Page 22: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

2222

ABRs: What is Threshold?

Noise floor, and therefore “threshold” is affected by amount

of averaging

Strategy 1:Iso-response criteria

Page 23: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

2323

ABRs: What is Threshold?

Noise floor, and therefore “threshold” is affected by amount

of averaging

Strategy 2:Follow the waves

80 1 2 3 4 5 6 7

Normalized Waveforms

Time (msec)

10 dB

15 dB

20 dB

25 dB

30 dB

35 dB

40 dB

45 dB

50 dB

55 dB

60 dB

65 dB

70 dB

75 dB

Threshold

Page 24: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

2424

ABRs: What is Threshold?

Even with extensive averaging, ABR/CAP

“Threshold” is > single fiber “Threshold”

Page 25: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

2525

ABRs: Signal Averaging

“Artifact Reject” in the software allows

removal of large potentials due to EKG

Page 26: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

26

ABRs: How they are measured in the lab

Page 27: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

2727

ABRs: How they are measured in the lab

Page 28: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

2828

ABRs and DPOAEs:The Laboratory

Page 29: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

2929

Ear Canal Surgery

Page 30: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

3030

LabVIEW Software Controller: Main Menu

3

Group ID #

ABR ACQUISITION ABR DATA PLOT

EQPT SETUP

QUIT

NEW GROUP

RUN OPTIONS

DP ACQUISITION0

DP RUN #DP DATA PLOT

SETUP OPTIONS(do each only once)

0

ABR RUN #

Page 31: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

3131

Software Controller: DPOAE Control & Indicators

4.0

f2 Frequency

15

Start dB

80

Stop dB

5

dB Step

25

#Waves per Spectrum

1. Set Stimuli

2. S tart START

3. Watch Data Acquisition

ABORT

4. Add Notes (Optional)

5. Sav e SAVE DATA

6. Note FilePath

7. Return to Main Menu RETURN

Type stuff here if you want

0

-140

-120

-100

-80

-60

-40

-20

Frequency (Hz)

500001000 10000

Response Spectrum

2

ID #

1

Run #

90

-40

-30

-20

-10

0

10

20

30

50

60

80

Primary Level (dB SPL)

805 10 15 20 25 30 35 40 45 50 55 60 65 70 75

DPOAE Amplitude vs Level

f1

105.46103.25 MAX SPL

f1 f2

1.2513

-1.2199-1.0000

-0.5000

0.0000

0.5000

1.0000

Time (msec)

2.00.0 0.2 0.4 0.6 0.8 1.0 1.2 1.4 1.6 1.8

Response Waveform

C:\Data\HST721- DATA\HST721-2\DP-2-1

2f1-f2

40

70

f1

f2

2f1-f2

Noise Flr

Page 32: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

3232

Software Controller: Data Storage

:RUN-1 DP I-O 3:54 PM:Level Step (dB):5 Start dB: 20 Stop dB: 50# Buffers Averaged: 25Sampling Interval:4 Ear:Right

:NOTES-:CHAMBER-4

:ANALYZED DATA:Command dB Measured f1(dB) Measured f2(dB) 2f1-f2(dB) 2f1-f2Nse(dB)20.00 30.01 19.97 -24.01 -25.3325.00 35.05 24.98 -26.75 -23.7130.00 40.04 30.01 -25.80 -25.4235.00 45.04 35.01 -25.51 -24.8640.00 50.04 40.04 -22.93 -25.0645.00 55.11 45.05 -20.88 -24.5450.00 60.10 50.05 -23.63 -24.94

:RAW WAVEFORMS0.002390 0.003187 0.004161 0.006183 0.009836 0.016199 0.0277110.002397 0.003308 0.004397 0.006392 0.010246 0.016801 0.0288280.002385 0.003362 0.004509 0.006510 0.010535 0.017273 0.029696

etc.

Page 33: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

3333

Software Controller: ABR Control & Indicators

START

ABORT

10

START (dB)

80

STOP (dB)

512

# AVERAGES per LEVEL

8.00

FREQUENCY

5

dB STEP

Tone Pip Stimuli

SAVE DATA

35

REP RATE (pips/sec)

15

REJECT THRESH (µV)

2. Start

1. Set Stimuli

5. Save

3. Watch Data Acquisition

4. Add Notes (Optional)

6. Note FilePath:

RETURN7. Return to Main 3

ID #

15

0

5

10

1000 20 40 60 80

Amplitude vs Level

20

-1

0

1

2

3

4

5

6

7

8

9

10

11

12

13

14

15

16

17

18

19

80 1 2 3 4 5 6 7

1

RUN #

10

8

9

Time (msec)

90 1 2 3 4 5 6 7 8

Current Average

113 MAX SPL

6 # RejectsReject Flag

512 # Averages

80SPL

6

-6

-4

-2

0

2

4

Time (msec)

600 5 10 15 20 25 30 35 40 45 50 55

Stimulus Waveform

Level (dB SPL

C:\Data\HST721- DATA\HST721-3\ABR-3-1

Stacked Waveforms - All Levels

SPLList

Page 34: HST 721 Mouse Lab: Noninvasive Assessment of Cochlear Functionweb.mit.edu/HST.721/www/Lectures/Lecture_OAEABR.pdf · DPOAEs: How they are measured in the lab. 10 DPOAEs: What you

3434

Software Controller: Data Storage

:RUN-0 ABR I-O 10/24/2003 4:47 PM: EAR: R FREQ: 16.00 # AVES: 400 REP RATE (/sec): 80 SAMPLING (µsec): 10:NOTES-:CHAMBER-4:SPLs TESTED-20;30;40;50;60;70;80;

:ANALYZED DATA:SPL "NEURAL" P-P "CM" P-P20.000 1.563 1.29630.000 1.587 1.52940.000 1.514 1.01750.000 1.562 1.56660.000 1.820 1.49070.000 2.368 2.67180.000 3.563 4.549

:RAW WAVEFORMS-0.084572 -0.060116 -0.104443 0.059216 0.167206 -0.009075 -0.132732-0.046043 -0.051418 -0.105358 0.054485 0.158127 -0.014187 -0.088329-0.042152 -0.030743 -0.097805 0.046932 0.125854 -0.006329 -0.072536