Harvard SEAS Newsletter Winter 2010

Embed Size (px)

Citation preview

  • 8/14/2019 Harvard SEAS Newsletter Winter 2010

    1/20

    www.seas.harvard.edu

    Uncovering Open AccessBy Michael Patrick Rutter & James Clyde Sellman

    winter 2010

    Topics

  • 8/14/2019 Harvard SEAS Newsletter Winter 2010

    2/20

    to the general public,

    doing science is all aboutdiscovery. but in truth,

    thats only hal the picture.

    consider the experience o an

    obscure nineteenth-century

    augustinian monk...

    rom 1856 to 1863, gregor

    mendel cultivated and

    observed 29,000 pea plants

    and managed to unlock some

    o the secrets o heredity,

    including the concepts o

    dominant and recessive traits.

  • 8/14/2019 Harvard SEAS Newsletter Winter 2010

    3/20

    In 1865,Mendel presented his ndingsas a two-part lecture, Experiments on Plant

    Hybridization, beore the tiny Natural History

    Society o Brnn (present-day Brno, Czech

    Republic). A year later, he published his nd-

    ings in the societys Proceedings, o which 115

    copies are known to have been distributed.

    With that, his painstaking work disappeared

    virtually without a traceor 35 years. In sci-

    entic terms, an eon. Biologists struggled on,

    ruitlessly seeking to explain heredity through

    blending theories or with Darwins earnest but

    wrongheaded notion o pangenesis. At last,

    in 1900, Mendels work was rediscovered and

    helped spark the modern science o genetics.

    The ate o Mendels research is a sharp

    reminder that aside rom discoveryi.e.,

    the ndingsscience is also emphatically

    about dissemination, that is, access to (and

    application o) those ndings. Open access

    seeks, through the power o the Internet, to

    make scholarly materials reely available to

    the world. No passwords. No subscription ees.

    And today, it is perhaps the hottest fashpoint

    in science publicationwith Harvard, and an

    unlikely rebrand named Stuart Shieber 81,

    right in the thick o things.

    With the ability to watchlectures from courses likeCS 50 on mobile devices,the role print plays in astudents life is changing.

    1

  • 8/14/2019 Harvard SEAS Newsletter Winter 2010

    4/20

    an seas computer scientist and tireless advocate

    o open access, crated an open-access policy or

    scholarship that the harvard aculty o arts and

    sciences (as) adopted, unanimously, in ebruary

    2008. thoughtul, sot-spoken, almost serene, he

    hardly seems suited to the role o revolutionary.

    Shieber, an SEAS computer scientist and tire-

    less advocate o open access, crated an open-

    access policy or scholarship that the Harvard

    Faculty o Arts and Sciences (FAS) adopted,

    unanimously, in February 2008. Thoughtul,

    sot-spoken, almost serene, he hardly seems

    suited to the role o revolutionary. RichardPoynder, an astute observer o the chang-

    ing landscape o journalism and publishing,

    suggested in his blog that this poster child

    or open access might lack the necessary grit

    to push the movement orward. Undeterred,

    Shieber keeps on pushing. The heart o his

    proposal: Each Faculty member grants to the

    President and Fellows o Harvard College per-

    mission to make available his or her scholarlyarticles and to exercise the copyright in those

    articles. Dont be ooled by the matter-o-act

    language: this is pure dynamite. It grabbed

    headlines and roiled the Internet, hailed by

    some as bold and visionary even as a shot

    heard round the academic world.

    While other universities open-access policies

    had been premised on individual aculty

    members opting in, in Harvards policy, the

    presumption is that aculty will make their

    work reely available, unlessor a given

    publicationa aculty member opts out. Ac-

    cording to Peter Suber, a leading proponent

    o open access and currently a visiting ellow

    at the Law Schools Berkman Center or

    Internet and Society, its the best university

    policy anywhere. A newly created Oce or

    Scholarly Communications (OSC), headed

    by Shieber, was tasked with administering the

    policy, which includes archiving o publica-

    tions in a central repository, known as DASH,

    or Digital Access to Scholarship at Harvard.

    But why all the uss? Hasnt the Internet

    already put worlds o knowledge just a mouse-

    click away? Shieber points out that, contrary

    to conventional wisdom, academics access

    to relevant scholarly inormation is actually

    decreasing. The problem isnt with the technol-

    ogy or disseminating knowledge but ratherwith the increasingly inability o institutions

    and individuals to pay or access. Harvards

    policy seems almost elegant in its simplic-

    ity. Under the new policy, Suber explains,

    aculty members retain some o the rights

    they ormerly gave to publishers, and they use

    those rights to authorize open access.

    For academic publishers, it was an unprec-edented shot across the bow. Moreover, the

    School o Education and the Law School

    quickly adopted similar policies. And on

    September 15, Cornell University, Dartmouth

    College, MIT, and the University o Caliornia

    at Berkeley all joined Harvard in a general

    compact to support open-access publishing

    by providing administrative, technical, and

    monetary support. Change is in the air, but

    where is it headedand what does it portend?

    To understand the controversy over open

    access you need to untangle a complex back-

    story, one that involves the long history o

    the academy, the rise o scholarly publishing,

    and the ederal unding o research since the

    Second World Warwith side trips into the

    rise o the Internet and the changing role o

    libraries. Even human (or, at least, aculty)

    nature gures into the mix. Its complicated

    but essential to understanding where we are

    and where were likely to be headed.

    Shie

    2

  • 8/14/2019 Harvard SEAS Newsletter Winter 2010

    5/20

    Topics | Winter 2010

    ber,Movable type breachesthe ivory tower

    Prior to the Enlightenment, the university

    was a very dierent place rom todays research-

    centered institution. Medieval universities,

    such as Oxord (ca. 1167), had a ocus that

    was largely religious, and or centuries their

    eorts at dissemination likewise stressed

    religion: Harvard, or example, was ounded

    in 1636 mainly or the purpose o training

    ministers. But gradually, under the infuence

    o humanist principles that emerged during

    the Renaissance, the university began a meta-

    morphosis that would ultimately yield todays

    modern research institution. And publishinglay at the heart o the transormation.

    Oxord University Press (OUP) was one o the

    very earliest modern academic publishers. As

    the OUP website explains, it emerged as part

    o the inormation technology revolution o

    the late teenth century, which began with

    the invention o printing rom movable type.

    Lead letters, tucked into wooden shadowbox-es. Theres something charming about linking

    the digital revolution back to a collection o

    smudged metal blocks. But compare the ardu-

    ous task o hand-copying and illuminating a

    manuscript with the relative ease o setting

    (and editing) type, and suddenly it makes

    sense as a game-changer.

    Moreover, with the widespread adoption o

    modern printing, the gates o academia began

    to crack open. Universities began by publish-

    ing Bibles and other religious works but soon

    the scope o their activity began to expand,

    diversiying into dictionaries, biographies,music, and journals. Universities learned that

    to preserve the knowledge o their aculty,

    they needed to disseminate it: knowledge

    and access to knowledge went hand in hand.

    Thus universities also turned to publishing

    academic materials, and by the eighteenth

    century, many were publishing their own

    research journals.

    3

  • 8/14/2019 Harvard SEAS Newsletter Winter 2010

    6/20

    In contrast, commercial publishers entered

    the scholarly landscape more gradually. Then

    as now, commercial publishing was highly

    competitive, and publishers, highly risk-

    averse. In a perceptive essay on American

    university presses, Peter Givler observed that

    leaving the publication o scholarly, highly

    specialized research to the commercial mar-ketplace would be, in eect, to condemn it

    to languish unseen. Commercial publishers,

    however, had the necessary distributional mus-

    cle. Despite the growth o university presses

    and the burgeoning o scientic activity,

    research ndings continued to be surprisingly

    inaccessible. Well into the nineteenth century,

    much o the exchange o scientic inorma-

    tion took place behind closed doorsinVictorian lounges o members-only organiza-

    tions, like the Royal Society in England, or in

    the growing number o local natural history

    or scientic societies. Though many o the

    local societies published Proceedings,they and

    their publications actually limited access to

    research ndingsas with Mendel and the

    115 known copies o the 1866 Proceedings o the

    Natural History Society o Brnn.

    Such eorts at least refected an awareness

    o the need to disseminate knowledge. In

    the United States, or example, the Ameri-

    can Association or the Advancement o

    Science (AAAS) was ounded in 1848. And

    the Lawrence Scientic School at Harvard

    (the progenitor o SEAS) was established

    in 184647. In a letter to the University, Ab-

    bott Lawrencewhose git unded the newschoolvoiced his concern that we have

    been somewhat neglectul in the cultivation

    and encouragement o the scientic portion

    o our national economy. Among those

    neglecting the nations scientic enterprise

    were, with ew exceptions, publishers. But

    by the late nineteenth century, commercial

    scholarly publishing began to emerge in

    something approaching its modern sense.In 1869, or example, publisher Alexander

    Macmillan ounded Naturein Britain. (For

    some time, it survived mainly as a personal

    labor o love: according to the Naturewebsite,

    Macmillan tolerated a loss-making venture

    or three decades.)

    In the United States, Science Magazine(later

    simplyScience), played a similar role as a

    commercial journal or broad-based scien-

    tic knowledge. And, like Nature, it aced

    economic challenges. Backed by Thomas

    Edison and Alexander Graham Bell, the

    journal began rolling o the presses in 1880.

    But it barelysurvived a series o nancialcrises beore gaining a measure o stability by

    partnering with the nascent AAAS. Scienceand

    Natureelevated, even liberated, scholarly com-

    munication, presenting a broad overview o

    discoveries to anyone willing to pay the then

    relatively small subscription ee. Moreover,

    many early commercial scholarly publishers,

    like Macmillan, valued the dissemination o

    knowledge as well as prot-making.

    But whats the relevance o Victorian publish-

    ing eorts to open-access scholarship? The is-

    sues that were present at the outset o modern

    scholarship and scholarly publishinghow

    to distribute and archive knowledge and, no

    less important, how to pay or ithavent

    changed. Theyre the same challenges that

    we conront today. From hand-illuminated,

    gilt-edged manuscripts to lead type and steam-powered presses to silicon and bits and bytes,

    the issue has always been accesswho has it,

    what does it cost, and is it sucient?

    Commercial publishers

    tiptoe onto the scene

    despite the growth o university

    presses and the burgeoning o scientifc

    activity, research fndings continued to

    be surprisingly inaccessible.

    4

  • 8/14/2019 Harvard SEAS Newsletter Winter 2010

    7/20

    The Gordon McKay Libraryat SEAS consists of120,000 volumes and over600 subscription journals.Photo by Eliza Grinnell.

  • 8/14/2019 Harvard SEAS Newsletter Winter 2010

    8/20

    By the latter hal o the twentieth century

    as scientic enterprise and college and univer-sity enrollments burgeonedit appeared that

    researchers and publishers had achieved a

    lasting partnership. Much o the credit, ironi-

    cally, goes to the Second World War. The war

    highlighted the strategic importance not just

    o science but o access to scientic inorma-

    tion. Early on, Pres. Franklin D. Roosevelt and

    Prime Minister Winston Churchill reached

    an inormal agreement that the United Statesand Great Britain would share (at no cost) any

    scientic development o potential military

    value. The ederal government also collabo-

    rated as never beore with universities and

    the private sector, above all in the Manhattan

    Project and the building o the atomic bomb

    but also in a host o other developments in-

    cluding radar, sonar, synthetic rubber, nylon,

    the proximity use, and napalm (developed

    in 194243 by a Harvard team headed by

    chemistry proessor Louis F. Fieser). This ed-

    eral engagement in scientic research didnt

    end with peacetime; indeed, it continued to

    expand.

    Thus, Edwin Purcell, Gerhard Gade University

    Proessor,Emeritus,and co-winner o the 1952

    Nobel Prize in Physics, was instrumental in

    developing the principles o nuclear magneticresonance (NMR). In the coming decades,

    the applied sciences continued to blossom. At

    Harvard alone, Harold Thomas, Jr., whose last

    position was as Gordon McKay Proessor o

    Civil and Sanitary Engineering, spearheaded

    the amed Harvard Water Program; Ivan

    Sutherland conducted research that resulted

    in the rst head-mounted display, one o the

    rst attempts at virtual reality; and the Univer-sity became an early node on the ARPANET,

    the precursor o the Internet.

    Taking advantage o the bustling research

    activity, economies o scale oered byadvances in printing technology, and their

    well-established editorial and production

    skills, commercial publishers now seized on

    science as a viable, paying venture. New elds

    blossomedcomputer science, cognitive sci-

    ence, neuroscienceeach accompanied by

    the requisite specialty journals. In many ways,

    publishers (and particularly the editors o

    such journals) joined academics as partners inthe scholarly enterprise. Faculty members pro-

    vided the content; publishers lined up volun-

    teer peer-reviewers, arranged or promotion

    and distribution, and helped hone and polish

    the manuscripts. Indeed, scholarly publishers

    in many respects helped to shape elds. They

    generally also demanded that authors cede

    their entire copyright interest. (Publishers,

    however, still pay nothing or these rights.)

    The partnership was seen as analogous to

    the role o art museums. I people wanted to

    see the paintings, they had to pay to enter.

    And i artists wanted others to see their art,

    they needed to entrust that work to the gallery

    or museum. Given the small number o sub-

    scribers and the high quality o the value-add-

    ed editorial work, the cost o access seemed

    justied. And beore the rise o instantonline publishing, how else could academics

    circulate their work in a orm more durable

    than an oral presentation? Particularly in the

    last 20 years, Shieber says, demand has been

    inelastic, and [the publishers] clearly took

    strong advantage o that. Which was ne as

    ar as academics were concerned: they never

    really knew the direct costs because university

    libraries picked up the tab.

    Scholars and publishersa partnership in peril

    6

  • 8/14/2019 Harvard SEAS Newsletter Winter 2010

    9/20

    Unortunately, or both academics and

    publishers, the honeymoon was short-lived.Well beore the current economic storm, the

    pricing model or scholarly publication was

    beginning to break down. Publishers charged

    ever-higher subscription ees. (Institutional

    online subscriptions to journals like Brain Re-

    searchcan now run as high as $20,000 a year.)

    Libraries and universities bridled at the rising

    costs but initially did little to push back. While

    individual institutions might negotiate betteror modied deals with publishers, overall,

    libraries have ound it a losing game.

    For example, in 2007 the Max Planck Institute

    stopped subscribing to Springers journals in

    protest o the high cost, but, as one version

    o the story goes, researchers demanded the

    return o their journal collections. A year later

    the Institute resubscribed ater negotiating

    a time-limited experimental mix o openaccess and subscription models with Springer.

    Under the agreement, all authors rom Max

    Planck gained access to 1200 journals and had

    the costs waived or Springers Open Choice

    program that oers authors to have their

    journal articles made available with ull open

    access in exchange or payment o a basic

    ee (article processing charge). A sign o

    progress or sure, but a limited one as MaxPlanck still had to oot a substantial bill (the

    nancial terms were not disclosed) and other

    institutions and readers remain on the hook

    or substantial subscription ees, as the vast

    majority o Springers content remains locked.

    In act, prohibitive subscription costs and,

    more recently, budget cuts have orced manylibraries to permanently cut back on journal

    subscriptions, online and print. Even in the

    best o times, Harvard (which maintains one

    o the largest libraries in the world) hasnt

    been able to subscribe to every journal. Today,

    however, the situation is signicantly worse.

    One problem, explains Martha Marce

    Wooster, head o SEASs Gordon McKay

    Library, is the lack o any algorithm a librar-ian can use to determine what journals to

    keep or cut, whether based on price or need

    or access. In some cases, publishers now tie

    multiple journals together, taking advantage

    o online portals. And while you can oten

    hand-tailor journal subscriptions or your insti-

    tution (only requesting access to the particular

    journals aculty would need), the overall cost

    savings relative to buying the entire package

    is limited or nonexistent. The upshot is that

    aside rom interlibrary loan or direct cor-

    respondence with researchersthe only way

    or a aculty member to see certain research

    ndings is by paying the publishers going

    rate. As libraries ace continued cutbacks, this

    will present more and more o a challenge or

    the scholarly enterprise.

    ril

    Topics | Winter 2010

    7

  • 8/14/2019 Harvard SEAS Newsletter Winter 2010

    10/20

    The Internet, of course, was the nal kink

    in the chain of events that imperiled the

    academiccommercial publishing partnership.

    That might not seem surprising. The Web

    has radically revised much of life, includ-

    ing academia. At SEAS, for example, CS 50,

    Introduction to Computer Science I, and QR

    48, Bits, are available online. And instead

    of a textbook, the introductory Life Sciences

    sequence now makes use of a multimedia

    showcase. MITs open courseware initiative

    is a permanent, ongoing program to make

    availablefree and onlinemuch of MITs

    course content. But curiously, while we can ac-

    complish more and more online (sending holi-

    day cards, managing our bank accounts, re-

    newing drivers licenses, etc.), the knowledge

    produced by research universities like Harvard

    has remained comparatively inaccessible, in

    a sort of cyberspace lockdown. How did that

    happen? How was it allowed to happen?

    Before its emergence as a full-edged social

    networking and shopping tool, the Internet

    served university researchers. But if the cur-

    rent commercial model for publication goesunchallenged (leaving publishers as gatekeep-

    ers to Web-based scholarship), the Internet

    could become more a barrier than a catalyst

    for the scholarly enterprise. If the publisher

    owns and controls the scholarly content,

    Shieber says, theres no way to prevent that

    publisher from limiting access and charging for

    that access. In the early days of the Internet,

    the cost of digitizing print materials was farfrom trivial, and publishers could justify high

    online-subscription fees as they migrated

    journal content to this uncertain new medium.

    Thus, while many other sites began giving

    away content, scholarly publishers retained

    and further beefed up their access controls.

    But are there viable alternatives? Any solution

    will require a rethinking of the status quo in

    scholarly publishing. One possibility is open-

    access journals, exemplied by the publica-

    tions of PLoS (Public Library of Science),

    founded in 2000 by Nobel laureate Harold Var-

    mus. In PLoS journals, authors retain all rights

    to their work, and anyone can download and

    use information from PLoS free of charge, pro-

    vided proper credit is given. But such efforts

    are still dwarfed by the subscription journals,

    and some of the traditional, longer-standingpublications still count for more in terms of

    academic status. Moreover, open-access un-

    dertakings arent cost-free: such journals still

    need to be supported and maintained.

    In the case of many open-access journals,

    these costs are shifted to the authors rather

    than the readers side. On the highest end, a

    agship PLoS journal, for example, charges

    authors around $3,000 for the publication of

    an article. That makes subscription-based pub-

    lications, which typically dont charge authors

    for publication, much more attractive for many

    authors.

    In addition, its important to appreciate the

    value added by commercial publishers. Partic-

    ularly in an age of instant publication, Shieber

    argues, you need people that do what editors

    and journals do now. This includes managing

    the peer-review process, performing editorial

    and production work, and distributing andarchiving the nal product. No less important,

    theres the branding and imprimatur, some-

    thing that happens more or less as a side

    effect of publication in a particular journal.

    The Web has made it possible to unbundle

    these activities: peer review could happen

    in an online forum; editorial and production

    work could be done almost anywhere. But theactivities themselves (and their coordination)

    remain essential, and they come at a price.

    Unfortunately, Wooster says, Web technol-

    ogy has yet to put scholarly publishing on

    an economic basis thats not dysfunctional.

    As counterintuitive as it sounds, the shift of

    scholarship from print to Web (unlike musics

    move from CDs to MP3s) has resulted in

    signicantly higherprices, despite doing away

    with a raft of standard printing costs. Shieber

    felt there simply had to be another way, where

    scholarship ends up winning.

    Rethinking the model

    8

  • 8/14/2019 Harvard SEAS Newsletter Winter 2010

    11/20

    With powerulincentives or pub-lishing in commercial journals, why would anaspiring aculty member choose open access?

    This is where Shieber steps in. His plan is to

    make open access viable, in essence, by level-

    ing the playing eld or scholarly publication.

    According to Shieber, all thats needed to set

    open access on par with commercial options

    is that those underwriting the publishers

    services or subscription-ee journals committo a simple compact guaranteeing their will-

    ingness to underwrite them or processing-ee

    journals as well.

    This commitment, i widely embraced by

    universities and unding agencies, would

    reduce the disincentives or aculty to publish

    in open-access venues. While supporting

    open-access publishing ees might seem like a

    costly commitment or an institution to take

    on, in some scenarios, it could be completely

    oset by the reduction over time in ees or

    subscription-based journals. Indeed, existing

    subscription journals might even convert to

    open-access models (should the benets be

    suciently compelling). Shiebers compact

    has another advantage: paying to publish

    is more transparent. Traditionally, Shieber

    writes, consumers o scholarly articles havebeen well-insulated rom the cost o reading.

    I aculty were brought ace to ace with the

    actual costs, they might more easily be en-

    listed in an eort to address the problem.

    To Shieber, such a compact would be arational, air, and economically sustainable

    way to support the publication o scholar-

    ship. Others arent so sure. One natural

    reaction would be: Why should there be any

    problemor compactat all? In this age, why

    should anyone have to pay to have access to

    scholarship? Stevan Harnad, an outspoken

    archivangelist or giving scholars the green

    light to reely and immediately archive anyarticle they author and a proessor o cogni-

    tive science at the University o Southampton

    (UK) School o Electronics and Computer

    Science, sums up this argument in a haiku:

    Its the online age/Youre losing research impact...

    /Make it ree online.

    Harnad believes that anything that distracts

    rom his goal o achieving universal access

    in short order (opt-in policies; denitions o

    copyright; or simply dealing with the various

    rules or ees publishers request or granting

    open access) distracts us rom the real issues.

    And i it does, Harnad contends, the research

    community will yet again have shot itsel in

    the oot insoar as universal OA [open access]

    ...is concernedRather than rearranging the

    deck chairs on the Titanic, he says, why not

    do something truly transormative. Harnadsparadigm: open-access sel-archiving, in which

    authors deposit material in open digital ar-

    chives. In short, even right-minded publishers

    and supportive academic institutions oten

    get in the way o scholars reaching their audi-

    ences directly.

    the man with aplanComputer scientist Stuart Shieber craftedan open access policy for scholarship that theHarvard Faculty of Arts and Sciences adoptedin February 2008.

    kris

    snibbe

    Topics | Winter 2010

    9

  • 8/14/2019 Harvard SEAS Newsletter Winter 2010

    12/20

    Shieber answers such criticisms much as anengineer would. Many aspects o commercial

    publishing work well, he says. Instead o bat-

    tling the system, our aim should be to set it on

    a realistic oundation. You can be passion-

    ate about all kinds o things, he says, but i

    theres no way or the economics to work out,

    it wont work. Notions that we should just

    give everything away or that inormation

    wants to be ree arent real-world solutions.The ree-content model, even with the help o

    advertisements, probably isnt sustainable in

    the short term, let alone the long. (The news-

    paper industry can certainly corroborate this.)

    While praising the good intentions o open-

    access advocates like Harnad, Shieber warns

    that the situation is ar rom simple. Theres a

    notion that once weve solved the access issue,

    our problems are over, Shieber says. The real-

    ity, he ears, wont be so obliging.

    A case study rom the American Physical Soci-

    ety (APS) highlights this point. In an article in

    the November 1996 APS newsletter, Paul Gin-

    sparg (now a proessor o physics at Cornell)

    observed that:

    publishers had defned themselves in terms o produc-

    tion and distribution, roles which we now regard aslargely automated [T]he essential question at this

    point is no longer whether the scientifc research lit-

    erature will migrate to ully electronic dissemination,

    but rather how quickly this transition will take place

    now that all o the requisite tools are on-line.

    Ginsparg suggested that a shit to electronicdissemination would quickly resolve the

    access problem. But more than a decade later,

    with scientic journals duly ensconced in

    cyberspace, the issue o access continues to be

    thorny and unresolved. People are economic

    actors, Shieber says, and that means they

    work in their own interest, subject to whatever

    constraints theyre under. For the publishers,

    owning the copyright to published articles

    and restricting access (through high ees)

    improves the chances o making scholarly pub-

    lications pay o. And what o the academics?

    While its in scholars best interests to have the

    broadest possible access to their work, the re-

    wards (and amiliarity) o the existing system

    exert a strong gravitational pull.

    Shieber contends that unless the incentives

    are right, allowing authors and publishersto choose among a variety o publishing

    platorms without penalty, scholarship will

    continue to suer until a crisis is reached.

    While you cant separate the economics rom

    the access issue, he says, the economic issue

    is clearly secondary. Once the economics are

    taken care o, aculty will be able to ocus on

    taking scholarship to the next level. And its

    there, in discussing the universitys role as agateway to knowledge, that he truly lets his

    passion show. The whole point o the univer-

    sity is that were supposed to be engaged in

    the generation o knowledge or the good o

    society, he says. So shouldnt society be able

    to get the goods?

    shieber contends that unless the incentives

    are right, allowing authors and publishers

    to choose among a variety o publishingplatorms without penalty, scholarship will

    continue to suer until a crisis is reached.

    Stuart Shieber: Natural Language Liberator

    The DASH Repository

    Building a Better e-Book

    Q&A with Scribds Trip Adler 06

    References and Additional Reading

    Discover More Onlinewww.seas.harvard.edu/topics

  • 8/14/2019 Harvard SEAS Newsletter Winter 2010

    13/20

    Shiebers ocus on economics and practicali-ties undoubtedly has merit and ts the SEAS

    emphasis on what works and practical appli-

    cations. But there are other actors involved

    here: open access raises matters o principle,

    both philosophical and political. Absent open

    access, how eectively can scholarship pro-

    mote the public good? To somei.e., those

    who nd it hard to imagine scholarship and

    the public good in the same sentencelim-ited access to an article on the Casimir eect

    or yet another interpretation o James Joyces

    Ulysseswouldnt exactly qualiy as a hot-button

    issue. Strictly ivory tower stu.

    In the case o science, engineering, and

    medicine, people generally understand that

    basic, seemingly esoteric research can yield

    proound improvements in our lives: NMR

    gives us magnetic resonance imaging (MRI)and improved medical diagnoses; digital and

    laser technologies give us CDs and DVDs; and

    a rotting cantaloupe in a Peoria, Ill., research

    lab gives us penicillin. Wooster wonders i

    uture benets may be threatened by the

    ongoing constriction o scholarly inormation.

    I no one knows about a nding, she says,

    thats a great disservice to the whole world. I

    universities are really aiming to improve theworld, we need to think hard about this.

    And there are other matters o principle

    involved. As Wooster says, Its always been

    insane that the aculty do the research and

    write the papers and then give it all awayand

    were orced to buyit back. I mean, dont

    we alreadyownit? Others make a similar

    argument with respect to taxpayers: theyre

    being denied something theyve already paid

    or. Ater all, ederal unds support a signi-

    cant portion o university research. (In 2009,

    ederal unding underwrote about 80% o all

    SEAS research.) But, with ew exceptions, the

    rights to this publicly unded researchwhen

    published in a traditional academic journal

    are transerred gratisto the publisher. Regard-

    less whether taxpayers are interested in, say,

    reading up on the latest advances in uel-cell

    technology, Shieber and other open-access

    advocates insist they should be able to do so:

    the principle still applies.

    Such considerations suggest another validmodel or open-access scholarship, aside

    rom sel-archiving and Shiebers compact.

    The ederal government could step into the

    breach: ater all, whats at stake isnt merely

    the public good butpublic goods. Given that

    much research is publicly unded, the people

    (and their government) have an interest in

    the results (and accessto those results). In

    other words, the researcher-publisher partner-

    ship isnt bipartiteits a three-way street.

    Perhaps all ederal research grants could stipu-

    late that ndings achieved with public support

    must be made reely available, either through

    publication in open-access journals or, i

    published in subscription-based ones, by being

    made concurrently available via a ree digital

    archive. At the same time, ederal research

    grants could cover reasonablepublication costs.

    The result, with some tweaking, could recon-

    cile the interests o all parties.

    In act, we already have a working model or

    a good part o this approach, in the area o

    medical research. The National Library o

    Medicine, part o the National Institutes o

    Health (NIH), operates PubMed, a compre-

    hensive database o journal citations and

    abstracts. It also maintains PubMed Central,a ree digital archive o biomedical and lie

    sciences journal literature. In April 2008, at

    the instruction o Congress, the NIH adopted

    a new public-access policy, mandating that any

    investigator unded by the NIH must submit a

    copy o any peer-reviewed manuscript that had

    been accepted or publication or posting in

    PubMed Central. At present, the policy doesnt

    provide unds to cover costs associated withpublication, somewhat limiting this best-

    practice scenario.

    Scholarship as a public good... and public goods

    Topics | Winter 2010

    11

  • 8/14/2019 Harvard SEAS Newsletter Winter 2010

    14/20

    The devil, of course, is in the details, and

    questions remain about the likely fallout from

    any programmatic commitment to open access.

    Would academic presses and parts of the com-

    mercial publishing business perish? Shieber

    insists that his goal (and the overall intent of

    open access) has never been to take down

    the publishers. Especially in the Wild West

    environment of cyberspace (from blog postings

    to tweets to suspect Wikipedia entries), editors

    and peer review are as essential as ever.

    For his part, Shieber downplays the impact of

    the current debate. A very small percentage of

    written works would fall under the open-access

    regime as its currently being discussed, he

    says. Right now, were just talking aboutscholarly articlespeer-reviewed, specialist

    works. The discussion doesnt involve books

    (see online content), editorials, content written

    by journalists, etc. Even if scholarly research

    shifted entirely to open-access journals tomor-

    row, publishers would hardly be out of work.

    In any case, there will probably be an endur-

    ing market for print versions of publications.

    (Kindle has yet to displace Amazons bookdepartment.)

    But what about the impact on libraries? As

    more and more collections move online,

    will the librarys storage function be dimin-

    ished? Many people assume that moving to

    e-journals and digital collections would pose

    a threat to libraries, with the latter winding up

    nearly invisible. Wooster strongly demurs. She

    doesnt think the digital library will be any less

    vital than todays paper-chase repositories.

    John Palfreythe Henry N. Ess III Professor

    of Law, head of the Law School library, and

    co-director of the Berkman Center for Internet

    and Societyanticipates the emergence of

    a whole new type of librarian (his preferred

    term is empiricist) as libraries transform into

    information centers, with open-access archives

    playing a major role. Much like publishers,

    libraries offer services that will continue to be

    of value even if journals go online and open-

    access archives become commonplace. Shieber

    agrees. Library services (reference, teaching,

    and new functions designed to make open-

    access materials available) will all continue

    to be needed and will be incorporated into

    the librarys purview, he says. And, Wooster

    points out, the librarys role as a place for arecord of history isnt likely to be changing

    any time soon.

    Moving forward on the question of access may

    also mean looking back to the traditional role

    of university presses as editors and distribu-

    tors of a given institutions scholarship. (Shie-

    ber concedes the irony that hes published

    his books with MIT Press rather than Harvard

    University Press.)

    University-based digital archives represent

    another avenue for open access. Such archives

    are already coming into being, as seen in the

    DASH open-access repository or the Medical

    Schools Harvard Catalyst project, which fea-

    tures a social networking database for linking

    researchers and research (including links to

    the DASH archive) across the entire University.

    And some elds (physics, for example) havelong maintained free archives of preprints,

    for example, arXiv.org, developed by Cornells

    Ginsparg.

    Mobilizing Harvard faculty behind the open-

    access model and developing a practical

    platform for its implementation will be ongoing

    challenges. Shieber has invited fellow open-

    access expert and Berkman Center VisitingFellow Suber to help further foster the process.

    Shieber cautions that any shift to open access

    will take time. Even after the conceptual and

    economic issues are resolved, he doesnt advo-

    cate changing everything at once. But once the

    issue of open access becomes secondary and

    the claims of researchers and publishers have

    been reconciled in a fair (and sustainable)

    way, then, he believes, scholars, universities,

    publishers, and the wider world will be able

    to focus on a bracing new realm ofdiscovery.

    And isnt that what we really want science and

    research to be about?

    Other ways to open access:Brave new libraries and digital archives

    12

  • 8/14/2019 Harvard SEAS Newsletter Winter 2010

    15/20

    Geniuses use American Express?

    In September, L. Mahadevan, Lola Englandde Valpine Proessor o Applied Mathematics,was named a MacArthur Fellowthe geniusellowshipor his research into the science andengineering o everyday lie. In addition to thefurry o media coverage, Mahadevan was evenapproached by American Express about appear-ing in an advertisement. SEAS is now home to

    three MacArthur geniuses: Lene Hau, Mallinck-rodt Proessor o Physics and o Applied Physics,was a MacArthur Fellow in 2001 and Dan Schrag,Sturgis Hooper Proessor o Geology and Proes-sor o Environmental Science and Engineering,was a Fellow in 2000.

    Passing of a pioneer of ocean dynamics

    Allan R. Robinson, Gordon McKay Proessor oGeophysical Fluid Dynamics,Emeritus, passedaway unexpectedly at the age o 76 on Sept.25, 2009. A special 1999 issue oDynamics oAtmospheres and Oceanshonored his prooundinfuence on the eld: His relentless quest orunderstanding o the inner workings o theocean has inspired many students, postdoctoral

    ellows, and colleagues alike. A memorial servicewill be held at Harvard in the spring.

    Next on 60 Minutes

    A small lm crew rom 60 Minutes spent aday at SEAS to record the visit by star che JosAndrs. An innovator in microgastronomy,Andres visited the labs o Dave Weitz, Mallinck-rodt Proessor o Physics and Applied Physics, tosee the latest in emulsions, and Vinny Manoha-

    ran, Assistant Proessor o Chemical Engineeringand Physics, to make mayonnaise with colloids,and he guest-taught ES 139, Innovation in Sci-ence and Engineeringwhere, o course, hedid a cooking demo. Weitz and colleagues aredesigning a uture General Education course onthe science and engineering o ood.

    Discover more in the SEAS 2008-9 annual report

    www.seas.harvard.edu/news-events/publications/

    annual-reports

    Community Highlights

    All hands on deckOn October 16, 2009, Dean Cherry A. Murray hosted her rst all-hands meeting to

    outline her 10-year plan or SEAS. She placed particular emphasis on hiring aculty;

    enhancing the curriculum through hands-on learning and new degree programs

    such as bioengineering; and investing in community-building. Murray also elaborated

    on her idea or a uture Deans Lectureship series that would bring prominent SEAS

    alumni to campus.

    For more details visit, www.intranet.seas.harvard.edu.

    Select Awards

    Five students named 2010 Siebel Scholars

    The Siebel Scholars program recognizes out-standing graduate students rom the worldsmost prestigious graduate schools. The studentswill receive a $35,000 award or their nal yearo graduate studies. SEAS graduate students sohonored include: Georey Werner Challen 02(Ph.D. candidate in Computer Science), ZhouFan 10 (A.B./S.M. candidate in Mathematics/Computer Science), Brett Alexander Harrison10 (A.B./S.M. candidate in Computer Sci-ence), Benjamin Lubin 99 (Ph.D. candidate inComputer Science), and Ameya Velingker 10(A.B./S.M. candidate in Mathematics, Physics/Computer Science).

    Zhigang Suo honored with HumboldtResearch Award

    Zhigang Suo, Allen E. and Marilyn M. PuckettProessor o Mechanics and Materials, has beenhonored with a Humboldt Research Award. The60,000-EUR award is conerred in recognition olietime achievements in research.

    Wood and Wolfe receive PresidentialEarly Career Awards

    Rob Wood, Assistant Proessor o Electrical Engi-neering, and Patrick J. Wole, Associate Proessoro Electrical Engineering, were each named arecipient o the 2009 Presidential Early CareerAward or Scientists and Engineers. Its the high-est honor bestowed by the ederal governmenton researchers at the early stages o their careers.

    Anthony Oettinger receives NationalIntelligence Medallion

    Anthony G. Oettinger, Gordon McKay ResearchProessor o Applied Mathematics and ResearchProessor o Inormation Resources Policy,

    received the National Intelligence Medallion inrecognition o outstanding service in support othe Director o National Intelligence as Chair-man o the Intelligence Science Board.

    MacArthur genius fellow L. Mahadevan. Photo courtesy

    the John D. and Catherine T. MacArthur Foundation.

    Around Oxford Street

    13

  • 8/14/2019 Harvard SEAS Newsletter Winter 2010

    16/20

    Research Briefs

    Implant-based cancer vaccine is rst to eliminate tumors in miceNew approach reprograms the immune system to attack tumors throughout the body.

    Who: David J. Mooney, Robert P. Pinkas Family Proessor o Bioengineering in

    Harvards School o Engineering and Applied Sciences and Core Member o the

    Wyss Institute, and Glenn Drano at the Dana-Farber Cancer Institute.

    Why it matters: The new approach uses plastic disks impregnated with tumor-specic

    antigens and implanted under the skin to reprogram the mammalian immune system

    to attack tumors.

    Whats next: Further research and development and extending the approach to other

    types o cancer and, much longer term, investigating broader clinical applications.

    Flight of the Robobee pushes the frontiersof engineering, entomology, and more

    Funded by a $10-million NSF grant, researchersare seeking to create next generation Micro AirVehicles.

    Who:A team led by Rob Wood, Assistant Proes-sor o Electrical Engineering, with collaboratorsrom Northeastern and Centeye, a microelec-tronics rm.

    Why it matters: The research could lead to agreater understanding o how to mimic the col-lective intelligence o a bee colony; oster novelmethods or building an electronic surrogatenervous system; and advance work on small-scalefying mechanical devices.

    Whats next: The scientists anticipate the deviceswill advance elds ranging rom the lie sciences(or example, entomology and developmentalbiology) to amorphous computing and electrical

    engineering.

    3-d structure of human genome deciphered

    Scientists have deciphered the three-dimensionalstructure o the human genome.

    Who: Erez Lieberman-Aidena graduate studentat both SEAS and the laboratory o Eric Landerat the Broad Instituteand colleagues.

    Why it matters: This nding deepens our under-standing o how cellular DNA olds at scales thatdwar the double helix, which promises to yieldurther insights into genomic unction.

    Whats next: Applying the discovery to curingdisease.

    China could meet its future energy needsby wind alone

    Researchers estimated that wind alone couldmeet the countrys electricity demands projectedor 2030.

    Who: Michael McElroy, Gilbert Butler Proessor

    o Environmental Studies; Chris P. Nielsen, Exec-utive Director o the Harvard China Project; andXi Lu, a graduate student (all based at SEAS)and a team rom Tsinghua University in Beijing.

    Why it matters: The group used extensive me-teorological data and incorporated the Chinesegovernments energy-bidding and nancialrestrictions or delivering wind power, provid-ing the rst ully comprehensive model or thepotential contribution o this renewable energy

    resource.

    Whats next: The researchers plan to conducta more intensive study in China to investigate theyear-to-year geographic variations in wind. Themodel could be used or assessing wind-powerpotential anywhere in the world, onshore oroshore, and could be extended as well to solar-generated electricity.

    Discover more research...

    www.seas.harvard.edu/news-events

    A computer rendered prototype of a robotic bee.Illustration courtesy of Robert Wood.

    Around Oxford Street

    14

  • 8/14/2019 Harvard SEAS Newsletter Winter 2010

    17/20

    New & Recent Appointments

    In Translation

    Xbox computing speeds up research

    NVIDIA Corporation recognized Harvard asa CUDA Center o Excellence or its commit-ment to teaching GPU (Graphics Processing

    Unit) Computing and its integration o CUDAenabled GPUs or a host o science and engineer-ing research projects.

    SEAS grad student and alumni recognized asamong worlds top young innovators

    In its annual TR35 list (the 35 top innovatorsunder the age o 35), MITs Technology Reviewhonored graduate student Erez Lieberman-Aid-en and two alumni with SEAS connections: JamesCarey 04, o SiOnyx, or his use o black siliconto build inexpensive, super-sensitive light detec-tors, and Kurt Zenz House 08, o C12 Energy,or his work in the capture o carbon dioxidethrough cement production.

    Robotic grasper grabs worldwideexclusive license

    Barrett Technology Inc. ormalized a licens-ing agreement with Harvard University underwhich it has acquired exclusive rights to a novelpolymer-based robotic-hand technology. Thisrobotic grasper was developed by Robert D.Howe, Gordon McKay Proessor o Engineering,and Aaron Dollar, a ormer member o Howeslab and currently an Assistant Proessor at YalesSchool o Engineering and Applied Science.

    A more exible gripallows this Harvard-basedrobotic hand to grasp arange of objects.

    aaron

    dollar

    Yiling Chen, Assistant Professor ofComputer Science

    Chena veteran o the online giant Yahoo!researches topics at the intersection o computer

    science and economics, encompassing algo-rithms, complexity, mechanism design, gametheory, optimization, multi-agent systems, andmachine learning.

    Stephen Chong, Assistant Professor ofComputer Science

    Chongs research aims to help programmerswrite trustworthy programs. He ocuses onusing programming language technologiesto provide strong, practical inormation-securityguarantees.

    Krzysztof Gajos, Assistant Professor ofComputer Science

    Gajoss research interests are in human-computerinteraction, articial intelligence, and applied

    machine learning.

    Daniel Needleman, Assistant Professor ofApplied Physics and Assistant Professorof Molecular and Cellular Biology

    Joint appointment with the Faculty o Arts and

    Sciences Center or Systems Biology

    Needleman uses quantitative experimental tech-niques to study how the cooperative behaviorso molecules give rise to the architecture and dy-namics o sel-organizing subcellular structures.

    Sharad Ramanathan,Assistant Professor of Molecular andCellular Biology

    Joint appointment with the Faculty o Arts andSciences Center or Systems Biology

    Ramanathans research explores the ways inwhich cells and organisms process signals rom

    their surrounding environment and how theunderlying molecular pathways or such sensoryprocessing evolved.

    eliza

    grinnell

    eliza

    grinnell

    eliza

    grinnell

    eliza

    grinnell

    15

  • 8/14/2019 Harvard SEAS Newsletter Winter 2010

    18/20

    Alumni Connections

    Everything and Anything

    We like to say that alumni rom SEAS go onto careers in everything rom engineering tophilanthropy. Even with that in mind, the recentpursuits o Phil Maymin 97 (M.S. in AppliedMathematics and a B.A. in Computer Science)

    are notably diverse. For his day job, Mayminserves as an Assistant Proessor o Finance andRisk Engineering at the Polytechnic Instituteo New York University.

    He also recently gained media attention orhis paper suggesting that hit songs can be usedto predict stock market behavior: With therecent high stock volatility, people should nowpreer less volatile music. Furthermore, the beatvariance appears able to predict uture market

    volatility, producing 2.5 volatility points o protper year on average.

    And in 2006, he ran or Congress in Connecti-cuts 4th Congressional District as an outspokenLibertarian. While he didnt win, he was knownor his humorous campaign ads.

    Discover more about SEAS alumni...

    www.seas.harvard.edu/audiences/alumni

    Recent Gifts

    Thanks to several current use gifts (below),SEAS has been able to greatly enhance itseducational programs.

    Warren Wilkinson SB 41 established a current-use SEAS Deans Discretionary Fund o $250,000.SEAS is using the fexible und to bolster the

    undergraduate teaching labs and supplementour current nanotech equipment.

    SEAS received over $325,000 in gifts fromvarious college alumni to support TECH. Thisgenerous support allows TECH to continuedeveloping innovative education or studentsthrough courses, seminars, training, networkingopportunities, and annual competitions.

    SEAS emeritus professor and Nobel Prize winner

    Nicolaas Bloembergen AM 51 GSA 48 GSA 51established a $1 million Charitable RemainderTrust that will ultimately support SEAS graduatestudents.

    Discover more ways to connect and to give...

    http://alumni.harvard.edu/

    Celebrating the interface of the artsand sciences

    The Laboratory at Harvard (The Lab), a catalystspace to support student and aculty explorationand experimentation, hosted an ocial openingon November 8 in the Northwest Science Build-ing. Exhibitions by Harvard students rangedrom Vertigrow, a modular planter designed orcrowded urban spaces, to GIGUE, a music-socialperormance generated rom human bio-data.The Lab (www.laboratory.harvard.edu) is led byDavid Edwards, Gordon McKay Proessor o thePractice o Bioengineering.

    J-Term course offers experience in the eldSEAS, in collaboration with the Escola Politc-nica o the Universidade de So Paulo and theDavid Rockeeller Center or Latin AmericanStudies, is oering a eld course that will takeplace in Brazil during the Universitys rst Janu-ary Term. Students will have opportunities toexplore energy, water, and the environment.

    Hands On, Minds On

    Innovation Space expands opportunities for studentsThe Technology and Entrepreneurship Center at Harvard (TECH) launched its

    new Innovation Space on September 1, expanding SEASs resources or experiential

    education and hands-on innovation. Occupying 2,100 square eet on the top foor o

    the Harvard Student Agencies (HSA), its open to students all hours and organized

    through a partnership between TECH, HSA, and their aliated student groups.

    Phil Maymin 97 is a professor and formerlibertarian political candidate. Imagecourtesy of Phil Maymin.

    SEASs Anas Chalah shows off the InstructionalLabs to Mireille and Warren Wilkinson 41.

    eliza

    grinnell

    Around Oxford Street

    16

  • 8/14/2019 Harvard SEAS Newsletter Winter 2010

    19/20

    After serving as dean of SEAS for the past

    six months, I nd myself with an enviable

    challenge. Our faculty, students, and staff are

    superb. Our alumni are as amazing as theyare dedicated. And Ive found that being part

    of Harvard, even during what has been a

    difcult time, is an unparalleledand exhila-

    ratingexperience.

    I believe that we can make SEAS even more

    outstanding as a school for engineering and

    applied sciencesnot simply continuing and

    maintaining what we have accomplished, but

    making SEAS preeminent in its faculty, its

    students, its research, its community. Ive

    outlined a plan, whichwith the help of an

    outstanding team of faculty and administra-

    torsI believe will take us in that direction.

    At the heart of this vision for SEAS is a

    comprehensive educational and research

    planning process and a renewed, commitment

    to building strong foundations and spreading

    the word. In short, we intend to be bold, to

    grow, and to continue raising our stature.

    This redesigned newsletter marks one of

    the ways were taking new steps to share the

    fantastic, broad-based contributions of the

    SEAS community with our friends, peers,

    and the world-at-large. In this issue, we tackle

    the topic of open-access scholarship. With

    the leadership of computer scientist StuartShieber, Harvard became one the rst aca-

    demic organizations in the country to adopt

    an open-access mandate. It also turns out

    that the problem of access is, at heart, a

    systems-level engineering problem with more

    twists and turns than a good mystery. As my

    predecessor Venkatesh Venky Narayanamurti

    was fond of saying, engineering does, indeed,underlie everything.

    I hope you nd our comprehensive look at

    open access as refreshing and as fascinating

    as I do. In coming issues, well cover a wide

    range of topics, including nature-inspired

    engineering, the future of energy, and student

    innovation.

    Our new website (www.seas.harvard.edu)is now the place to nd the latest news on

    research and student life.

    I also encourage you to become a fan of SEAS

    on Facebook (www.facebook.com/hseas);

    subscribe to the Harvard Research Twitter

    feed, twitter.com/HarvardResearch ; and visit

    the new Alumni Affairs site http://alumni.

    harvard.edu.

    Thanks to everyone who has made my

    transition so effortless. I look forward to

    meeting many of you in the months ahead

    and to keeping you up-to-date about our

    progress. In the meantime, please feel free

    to drop me a line.

    How do you make a greatplace even better?

    Cherry A. Murray

    Dean, Harvard School of Engineering and Applied Sciences

    John A. and Elizabeth S. Armstrong Professor of Engineering

    and Applied Sciences

    [email protected]

    Dean Cherry A. Murray

    eliza

    grinne

    ll

    End Note

  • 8/14/2019 Harvard SEAS Newsletter Winter 2010

    20/20

    ationoftheHarvardSchoolofEngineering

    iedSciencesCommunicationsOfce.

    endfeedbackto:commun

    [email protected]

    du

    sat617-496-3815.

    gEditor/Writer

    PatrickRutter

    ,Producer

    ica,

    Inc.

    or/Proofreader

    ydeSellman,

    PhD93

    StoryAuthors

    PatrickRutterisCommunicationsDirectorattheHarvar

    d

    fEngineeringandApplied

    Sciences.

    BeforejoiningSEA

    S,

    adecadeworkinginacademicpublishing.

    ydeSellman,

    PhD93,

    history,

    hascopyeditedtheSEAS

    ersince2006.

    Afreelance

    writerandeditor,h

    ehas

    dinHarvardWomensHea

    lthWatch,

    HarvardHealthLetter,

    ut.comsHealthChannel,a

    mongothers.

    ghtbythePresidentand

    FellowsofHarvardCollege.

    Wereexperimentin

    gwithnew

    waysofprovidingyouwiththe

    latestinformationfrom

    SEAS.

    Please

    giveus5minutes

    ofyourtimeand

    takeanonlinesurveyaboutour

    enhancedeffortsa

    ndtellu

    showwe

    canbetterkeepyo

    uup-to-dateabout

    teachingandresea

    rchatSEAS.

    Thanks!

    www.seas.harvard.e

    du/survey

    29OxfordStreet

    Cambridge,

    MA02138

    seas

    .harvard

    .ed

    u

    Survey