1
Molecular ecology genetics to better understand ecological triggers of bloom toxicity. Satellite algorithm assessment and remote sensing. Zebra mussel and microcystin relationship Environmental sample processor (ESP) Monitoring and observations identify environmental conditions promoting Microcystis blooms. HAB predictive modeling: 3D HAB particle forecast, seasonal forecast, weekly HAB bulletin. Remote Sensing We use a combined algorithm approach, using Fluorescent Line Height (FLH) and Chlorophyll Index (CI) which has an atmospheric correc?on. We have found that using the combined algorithms provide a beCer es?mate of HAB extent. MODIS images have been processed for 20082013 using daily images. In addi?on, a program was wriCen to do matchups for this ?me period using the satellite data and taking a 3x3 mean box around the la?tude and longitude points that our in situ data was collected at. We compared our in situ chlorophyll against FLH and CI values to convert to chlorophyll. Using this combined algorithm approach has applica?ons not just for HABs but for other environmental parameters such as suspended solids or bacteria. Harmful Algal Blooms Monitoring, Modeling and Remote Sensing: Advancing Predictions of Bloom Intensity and Movement Abstract The NOAA Great Lakes Environmental Research Laboratory’s comprehensive harmful algal bloom (HAB) program, which is coordinated in partnership with the Coopera?ve Ins?tute for Limnology and Ecosystems Research (CILER), inves?gates HAB events through the use of satellite images, advanced algorithms, hyperspectral overflights and in situ technologies (e.g. Environmental Sample Processor, gliders), and down to the ecology of bloom forming cyanobacteria at a genomics level. These onlake experimental and monitoring efforts allow us to develop advanced models (e.g. HAB tracker) that not only predict Microcys(s bloom size and intensity but also the movement of HABs around the western basin of Lake Erie. The products developed by our program are of cri?cal importance to regional stakeholders including, but not limited to Ohio EPA, City of Toledo (OH), City of Cleveland (OH), City of Monroe (MI), Old Woman Creek NERR, Cuyahoga County Board of Health, Michigan Department of Environmental Quality and Ohio Department of Health. The data that we collect is distributed to the aforemen?oned water u?lity managers, beach managers, ci?zen groups and academic partners on a weekly basis. During the 2014 Toledo water crisis, our website was heavily used as a central source of informa?on on bloom toxicity and loca?on as well as general HAB informa?on. GLERL’s longstanding HABs program con?nues to lead the region in advancing the understanding of HABs in the Great Lakes. Tim Davis 1 , Eric Anderson 1 , Tom Johengen 2 , Steve Ruberg 1 , Mark Rowe 2 , Andrea VanderWoude 2 , Sonia Joshi 2 1 NOAA Great Lakes Environmental Research Laboratory, 4840 S. State Rd., Ann Arbor, MI 48108 2 Coopera?ve Ins?tute for Limnology and Ecosystems Research/ University of Michigan, 4840 S. State Rd., Ann Arbor, MI 48108 Monitoring For nearly a decade, NOAA GLERL and CILER have been monitoring at specific sampling loca?ons in western Lake Erie on a weekly basis. The map below displays sampling sta?ons. In 2015, there will be two addi?onal sampling sites, which are represented by the red circles. In addi?on to weekly sampling, we are conduc?ng con?nuous monitoring at Sta?ons 2,6, and 8. Through the use of sensors and other instrumenta?on, we are able collect hourly soluble reac?on phosphorus (SRP) measurements, chlorophyll, phycocyanin, phycoerytherin, turbidity, and CDOM measurements, as well as 15 minute conduc?vitytemperaturedepth (CTD) readings among other data. This has given us a robust data set to research environmental factors that contribute to the growth and prolifera?on of Microcys(s and the ini?a?on of microcys?n. Monitoring data is also used to groundtruth remotely sensed bloom extent, distribu?on, and to validate our forecas?ng models. NOAA GLERL/ CILER’s HAB Program Top image: Satellite-derived HAB using FLH & CI algorithms after converted to chlorophyll on September 3, 2014. Bottom image: The extent of HAB on the same day (September 3, 2014). Forecas?ng Daily forecasts are made using the combined algorithm approach, which are then translated into 3dimensional par?cles using the P3D par?cle trajectory model. Horizontal diffusion is calibrated to drieers and ver?cal distribu?on/ mixing as well as buoyancy is included as well. Developing the forecast to include the influence of hydrodynamics on a 3D scale leads to a more robust product as the par?cles simulate the movement of HABs. We also make daily 5 day forecasts of the 3D currents using Lake Erie Opera?onal Forecas?ng System. FLH+CI Algorithm HAB (Chla (ug/L)) HAB Tracker is the next generation of the current NOAA HAB Forecast Bulletin. Improvements include: -Developing new algorithms to derive satellite based HAB detection that contains an atmospheric correction to remove haze (clouds) as well as parse out resuspended sediment from the algal bloom -Using a higher-resolution 3D hydrodynamic model for Lake Erie -By also using a 3D Lagrangian particle model to represent the algal bloom, which incorporates vertical mixing and biological processes such as buoyancy and migration -updating the forecast on a daily time step. GLERL and CILER’s HAB Team: Monitoring Tim Davis Duane Gossiaux Tom Johengen Ashley Burtner Danna Palladino Heidi Purcell Russ Miller Alicia Ritzenthaler Remote Sensing Steve Ruberg Andrea van der Woude Modeling Eric Anderson Greg Lang Mark Rowe Communications Sonia Joseph Joshi Joe Smith Comparison of two monitoring techniques for dissolved P. This underscores the value of continuous monitoring to obtain a more accurate picture of what occurs in western Lake Erie. DissolvedP – Toledo Channel Marker Light 2 (WE4) Cycle Quattr o NWS/NDFD NASA/MODIS Great Lakes Coastal Forecasting System (GLCFS) NOS/CO-OPS OAR/GLERL NOS/NCCOS OAR/GLERL R2O R2U weekly bulletin real-time monitoring daily forecast water intake managers Lake Erie HABs Tracker FLH+CI Algorithm Western Lake Erie Sampling WE AUG 1 WE AUG 1

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Page 1: Harmful Algal Blooms Monitoring, Modeling and Remote ... · Harmful Algal Blooms Monitoring, Modeling and Remote Sensing: Advancing Predictions of Bloom Intensity and Movement Abstract&

Developing Predictive Models to Improve Coastal and Human Health

and Beach Forecasting - HAB Component

Molecular ecology

genetics to better

understand ecological

triggers of bloom toxicity.

Satellite algorithm assessment

and remote sensing.Zebra mussel

and microcystin

relationship

Environmental

sample processor

(ESP)

Monitoring and

observations identify

environmental conditions

promoting Microcystis blooms.

HAB predictive modeling: 3D HAB particle forecast,

seasonal forecast, weekly HAB bulletin.

Remote  Sensing  We  use  a  combined  algorithm  approach,  using  Fluorescent  Line  Height   (FLH)   and   Chlorophyll   Index   (CI)   which   has   an  atmospheric   correc?on.   We   have   found   that   using   the  combined  algorithms  provide  a  beCer  es?mate  of  HAB  extent.  MODIS   images  have  been  processed   for  2008-­‐2013  using  daily  images.  In  addi?on,  a  program  was  wriCen  to  do  matchups  for  this  ?me  period  using  the  satellite  data  and  taking  a  3x3  mean  box   around   the   la?tude   and   longitude   points   that   our   in   situ  data   was   collected   at.   We   compared   our   in   situ   chlorophyll  against  FLH  and  CI  values  to  convert  to  chlorophyll.    Using  this  combined   algorithm   approach   has   applica?ons   not   just   for  HABs   but   for   other   environmental   parameters   such   as  suspended  solids  or  bacteria.  

Harmful Algal Blooms Monitoring, Modeling and Remote Sensing: Advancing Predictions of Bloom Intensity and Movement

Abstract  The   NOAA   Great   Lakes   Environmental   Research   Laboratory’s  comprehensive   harmful   algal   bloom   (HAB)   program,   which   is  coordinated   in   partnership   with   the   Coopera?ve   Ins?tute   for  Limnology   and   Ecosystems   Research   (CILER),   inves?gates   HAB  events  through  the  use  of  satellite  images,  advanced  algorithms,  hyperspectral   overflights   and   in   situ   technologies   (e.g.  Environmental   Sample   Processor,   gliders),   and   down   to   the  ecology   of   bloom   forming   cyanobacteria   at   a   genomics   level.    These   on-­‐lake   experimental   and  monitoring   efforts   allow   us   to  develop  advanced  models  (e.g.  HAB  tracker)  that  not  only  predict  Microcys(s   bloom   size   and   intensity   but   also   the  movement   of  HABs   around   the   western   basin   of   Lake   Erie.   The   products  developed  by  our  program  are  of  cri?cal  importance  to  regional  stakeholders   including,   but   not   limited   to   Ohio   EPA,   City   of  Toledo   (OH),   City   of   Cleveland   (OH),   City   of   Monroe   (MI),   Old  Woman   Creek   NERR,   Cuyahoga   County   Board   of   Health,  Michigan   Department   of   Environmental   Quality   and   Ohio  Department  of  Health.    The  data  that  we  collect  is  distributed  to  the   aforemen?oned   water   u?lity   managers,   beach   managers,  ci?zen  groups  and  academic  partners  on  a  weekly  basis.  During  the  2014  Toledo  water  crisis,  our  website  was  heavily  used  as  a  central   source  of   informa?on  on  bloom   toxicity  and   loca?on  as  well   as   general   HAB   informa?on.     GLERL’s   long-­‐standing   HABs  program   con?nues   to   lead   the   region   in   advancing   the  understanding  of  HABs  in  the  Great  Lakes.  

Tim  Davis1,  Eric  Anderson1,  Tom  Johengen2,  Steve  Ruberg1,  Mark  Rowe2,  Andrea  VanderWoude2,  Sonia  Joshi2  1NOAA  Great  Lakes  Environmental  Research  Laboratory,  4840  S.  State  Rd.,  Ann  Arbor,  MI  48108  

2Coopera?ve  Ins?tute  for  Limnology  and  Ecosystems  Research/  University  of  Michigan,  4840  S.  State  Rd.,  Ann  Arbor,  MI  48108  

Monitoring  For  nearly  a  decade,  NOAA  GLERL  and  CILER  have  been  monitoring  at  specific  sampling   loca?ons  in  western  Lake  Erie  on  a  weekly  basis.  The  map  below  displays  sampling  sta?ons.  In  2015,  there  will  be  two  addi?onal  sampling  sites,  which  are  represented  by  the  red   circles.   In   addi?on   to  weekly   sampling,  we   are   conduc?ng   con?nuous  monitoring   at   Sta?ons   2,6,   and   8.   Through   the   use   of  sensors   and   other   instrumenta?on,   we   are   able   collect   hourly   soluble   reac?on   phosphorus   (SRP)   measurements,   chlorophyll,  phycocyanin,   phycoerytherin,   turbidity,   and   CDOM   measurements,   as   well   as   15   minute   conduc?vity-­‐temperature-­‐depth   (CTD)  readings  among  other  data.  This  has  given  us  a  robust  data  set  to  research  environmental  factors  that  contribute  to  the  growth  and  prolifera?on  of  Microcys(s   and   the   ini?a?on  of  microcys?n.  Monitoring  data   is  also  used   to  ground-­‐truth   remotely   sensed  bloom  extent,  distribu?on,  and  to  validate  our  forecas?ng  models.    

NOAA  GLERL/  CILER’s  HAB  Program    

Top image: Satellite-derived HAB using FLH & CI algorithms after converted to chlorophyll on September 3, 2014. Bottom image: The extent of HAB on the same day (September 3, 2014).

Forecas?ng  Daily   forecasts   are  made   using   the   combined   algorithm  approach,  which   are   then   translated   into   3-­‐dimensional  par?cles   using   the   P3D   par?cle   trajectory   model.  Horizontal   diffusion   is   calibrated   to   drieers   and   ver?cal  distribu?on/   mixing   as   well   as   buoyancy   is   included   as  well.  Developing  the  forecast  to   include  the   influence  of  hydrodynamics   on   a   3D   scale   leads   to   a   more   robust  product  as  the  par?cles  simulate  the  movement  of  HABs.  We   also  make   daily   5   day   forecasts   of   the   3D   currents  using  Lake  Erie  Opera?onal  Forecas?ng  System.    

FLH+CI Algorithm

HAB  (Chl-­‐a  (u

g/L))  

HAB Tracker is the next generation of the current NOAA HAB Forecast Bulletin. Improvements include: - Developing new algorithms to derive satellite based HAB detection that contains an atmospheric correction to remove haze (clouds) as well as parse out resuspended sediment from the algal bloom - Using a higher-resolution 3D hydrodynamic model for Lake Erie - By also using a 3D Lagrangian particle model to represent the algal bloom, which incorporates vertical mixing and biological processes such as buoyancy and migration - updating the forecast on a daily time step.

GLERL and CILER’s HAB Team: Monitoring Tim Davis Duane Gossiaux Tom Johengen Ashley Burtner Danna Palladino Heidi Purcell Russ Miller Alicia Ritzenthaler Remote Sensing Steve Ruberg Andrea van der Woude Modeling Eric Anderson Greg Lang Mark Rowe Communications Sonia Joseph Joshi Joe Smith

Comparison of two monitoring techniques for dissolved P. This underscores the value of continuous monitoring to obtain a more accurate picture of what occurs in western Lake Erie.

Dissolved-­‐P  –  Toledo  Channel  Marker  Light  2  (WE4)  

Cycle

Quattro

NWS/NDFD

NASA/MODIS

Great Lakes Coastal

Forecasting System (GLCFS)

NOS/CO-OPS

OAR/GLERL NOS/NCCOS

OAR/GLERL R2O

R2U weekly bulletin

real-time monitoring

daily forecast

water intake managers

Lake  Erie  HABs  Tracker  

FLH+CI Algorithm

Western  Lake  Erie  Sampling  

WE AUG 1

WE AUG 1