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Evaluation of Sinorhizobium meliloti Signaling, Metabolism & Genetics with their Symbiotic Plant Host, Alfalfa Preston P. Garcia, Ph.D.

Evaluation of Sinorhizobium meliloti Retreat Garcia.pdf · •Castleton –Chris Villa, Molly Leach, Kelsey McKay, Katelynn Leavey –American Society for Microbiology –Faculty-Student

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Page 1: Evaluation of Sinorhizobium meliloti Retreat Garcia.pdf · •Castleton –Chris Villa, Molly Leach, Kelsey McKay, Katelynn Leavey –American Society for Microbiology –Faculty-Student

Evaluation of Sinorhizobium meliloti

Signaling, Metabolism & Genetics

with their Symbiotic Plant Host,

Alfalfa

Preston P. Garcia, Ph.D.

Page 2: Evaluation of Sinorhizobium meliloti Retreat Garcia.pdf · •Castleton –Chris Villa, Molly Leach, Kelsey McKay, Katelynn Leavey –American Society for Microbiology –Faculty-Student

Sinorhizobium meliloti

□ Exists in free living state or symbiont inside plant

roots

□ Ability to fix atmospheric nitrogen

Sinorhizobium + Alfalfa N2-fixing nodule

Page 3: Evaluation of Sinorhizobium meliloti Retreat Garcia.pdf · •Castleton –Chris Villa, Molly Leach, Kelsey McKay, Katelynn Leavey –American Society for Microbiology –Faculty-Student

Medical significance

□ Sinorhizobium is classified within the α2

subdivision of Proteobacteria

□ Mammalian pathogens Rickettsia &

Brucella

□ Sinorhizobium & Brucella are members

of the Rhizobiales order, both forming

chronic infections of eukaryotic cells

□ Exchange chemical signals with their

eukaryotic host to gain entry & prevent

their own destruction once inside.

Page 4: Evaluation of Sinorhizobium meliloti Retreat Garcia.pdf · •Castleton –Chris Villa, Molly Leach, Kelsey McKay, Katelynn Leavey –American Society for Microbiology –Faculty-Student

Using catabolite repression to

study S. meliloti physiology and

genetics

Page 5: Evaluation of Sinorhizobium meliloti Retreat Garcia.pdf · •Castleton –Chris Villa, Molly Leach, Kelsey McKay, Katelynn Leavey –American Society for Microbiology –Faculty-Student

Bacterial catabolite repression

□ When bacteria use one carbon source preferentially over another □ Exhibits diauxic growth.

□ First described by Jacques Monod as the “glucose effect” in E. coli in the 1940’s. □ Model system for understanding carbon

usage, gene regulation, and global gene expression.

Page 6: Evaluation of Sinorhizobium meliloti Retreat Garcia.pdf · •Castleton –Chris Villa, Molly Leach, Kelsey McKay, Katelynn Leavey –American Society for Microbiology –Faculty-Student

Identification of mutants with

altered Succinate-Mediated

Catabolite Repression (SMCR)

phenotype

Page 7: Evaluation of Sinorhizobium meliloti Retreat Garcia.pdf · •Castleton –Chris Villa, Molly Leach, Kelsey McKay, Katelynn Leavey –American Society for Microbiology –Faculty-Student

SMCR screen results

30,000 colonies

52 strains showed SMCR relief on plates

(blue)

Further tested in liquid with succinate and 2° carbon

sources: α-galactoside (raffinose)

β-galactoside (lactose)

α-glucoside (maltose)

One strain showed relieved SMCR with these

secondary carbon sources

Page 8: Evaluation of Sinorhizobium meliloti Retreat Garcia.pdf · •Castleton –Chris Villa, Molly Leach, Kelsey McKay, Katelynn Leavey –American Society for Microbiology –Faculty-Student

Mutation of sma0113 affects SMCR on multiple 2° C-sources

Garcia, P. P. Bringhurst, R.M. and D. J. Gage (2010). J Bacteriol. 192: 5725

Page 9: Evaluation of Sinorhizobium meliloti Retreat Garcia.pdf · •Castleton –Chris Villa, Molly Leach, Kelsey McKay, Katelynn Leavey –American Society for Microbiology –Faculty-Student

Two component systems

Pi Pi

Physiological signal

PAS

H670 D57

□ Regulatory circuits that mediate responses to

diverse environmental signals & play a central

role in bacterial physiology.

□ Excellent context in which to study cell signaling and biochemical circuits

Page 10: Evaluation of Sinorhizobium meliloti Retreat Garcia.pdf · •Castleton –Chris Villa, Molly Leach, Kelsey McKay, Katelynn Leavey –American Society for Microbiology –Faculty-Student

Utilization of fluorescent reporter

plasmids to monitor S. meliloti

competition and succinate sensing in

vivo

Page 11: Evaluation of Sinorhizobium meliloti Retreat Garcia.pdf · •Castleton –Chris Villa, Molly Leach, Kelsey McKay, Katelynn Leavey –American Society for Microbiology –Faculty-Student

Succinate Biosensor Plasmid □ Used to visually monitor specific carbon

sources in the rhizosphere.

□ GFP (green fluorescent protein) is

expressed by the dctA promoter of the

DiCarboxylate Transport system

□ Facilitates movement of succinate, fumarate,

malate and aspartate across cell membrane

□ Cells fluoresce when actively utilizing C4

dicarboxylic acids

Page 12: Evaluation of Sinorhizobium meliloti Retreat Garcia.pdf · •Castleton –Chris Villa, Molly Leach, Kelsey McKay, Katelynn Leavey –American Society for Microbiology –Faculty-Student

Glass slide

Pour Nod3 Agar

Media Place sterile

germinated

seeds

Overlay with moistened

dialysis tubing S. meliloti strain

Visualization of S. meliloti on

Medicago sativa (alfalfa) root

Page 13: Evaluation of Sinorhizobium meliloti Retreat Garcia.pdf · •Castleton –Chris Villa, Molly Leach, Kelsey McKay, Katelynn Leavey –American Society for Microbiology –Faculty-Student

5ml Nod3 Media

Growth chamber cycle:

16 hour light

8 hour dark

Prepare slide for growth

chamber

Page 14: Evaluation of Sinorhizobium meliloti Retreat Garcia.pdf · •Castleton –Chris Villa, Molly Leach, Kelsey McKay, Katelynn Leavey –American Society for Microbiology –Faculty-Student

Glass Slide

Dialysis tubing

Larger Glass

Slide

Inverted

microscope

objective

Orientation on Microscope

Page 15: Evaluation of Sinorhizobium meliloti Retreat Garcia.pdf · •Castleton –Chris Villa, Molly Leach, Kelsey McKay, Katelynn Leavey –American Society for Microbiology –Faculty-Student

S. meliloti growth in the

rhizosphere □ Actively grows on C4-dicarboxylic

acid root exudate

Rm1021/pPG12 (dctA::gfp)

Page 16: Evaluation of Sinorhizobium meliloti Retreat Garcia.pdf · •Castleton –Chris Villa, Molly Leach, Kelsey McKay, Katelynn Leavey –American Society for Microbiology –Faculty-Student

S. meliloti growth in infection

thread □ Actively grows on C4-dicarboxylic acids

within root hairs

Rm1021/pPG12 (dctA::gfp)

Page 17: Evaluation of Sinorhizobium meliloti Retreat Garcia.pdf · •Castleton –Chris Villa, Molly Leach, Kelsey McKay, Katelynn Leavey –American Society for Microbiology –Faculty-Student

Competitive nodulation assay

□ All S. meliloti deletion strains

are Fix+/Nod+

□ 10 distinct S. meliloti strains

(mutation in single gene of

TCS) transformed with

constitutive rfp or gfp plasmid □ Co-inoculated on a single sterile

germinated alfalfa seed.

Growth chamber

cycle:

16 hour light

8 hour dark

Page 18: Evaluation of Sinorhizobium meliloti Retreat Garcia.pdf · •Castleton –Chris Villa, Molly Leach, Kelsey McKay, Katelynn Leavey –American Society for Microbiology –Faculty-Student

Constitutive gfp and rfp

plasmids

Page 19: Evaluation of Sinorhizobium meliloti Retreat Garcia.pdf · •Castleton –Chris Villa, Molly Leach, Kelsey McKay, Katelynn Leavey –American Society for Microbiology –Faculty-Student

*Thank you

to Norwich U.

Page 20: Evaluation of Sinorhizobium meliloti Retreat Garcia.pdf · •Castleton –Chris Villa, Molly Leach, Kelsey McKay, Katelynn Leavey –American Society for Microbiology –Faculty-Student

Future directions

□ Visually document interactions in the

rhizosphere with the biosensor strains

□ Monitor relationship of the environmental

sensing capabilities for motility / chemotaxis

□ Analyze competition data to assess

infection and nodulation ability.

□ Complete knockout mutations of

genetically similar two component

systems to counter redundancy

Page 21: Evaluation of Sinorhizobium meliloti Retreat Garcia.pdf · •Castleton –Chris Villa, Molly Leach, Kelsey McKay, Katelynn Leavey –American Society for Microbiology –Faculty-Student

• VGN

– Jeanne Harris, Ph.D.

• Castleton – Chris Villa, Molly Leach, Kelsey McKay, Katelynn

Leavey

– American Society for Microbiology

– Faculty-Student Research Grants

– Advance Study grants

• UConn

– Daniel J. Gage, PhD.

– Charles Bridges

• St. Josephs University

– Dr. Catalina Arango

Page 22: Evaluation of Sinorhizobium meliloti Retreat Garcia.pdf · •Castleton –Chris Villa, Molly Leach, Kelsey McKay, Katelynn Leavey –American Society for Microbiology –Faculty-Student
Page 23: Evaluation of Sinorhizobium meliloti Retreat Garcia.pdf · •Castleton –Chris Villa, Molly Leach, Kelsey McKay, Katelynn Leavey –American Society for Microbiology –Faculty-Student

S. meliloti growth at root cap

□ Growing on sloughed off root cap cells

Rm1021/pPG12 (dctA::gfp) @ root cap