39
1 Coordination of swarming motility, biosurfactant synthesis, and 1 biofilm matrix exopolysaccharides production in Pseudomonas 2 aeruginosa 3 4 Shiwei Wang a , Shan Yu a , Zhenyin Zhang a , Qing Wei a , Lu Yan a , Guomin Ai a , Hongsheng 5 Liu b , Luyan Z. Ma a# 6 State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese 7 Academy of Sciences, Beijing 100101, China a ; 8 College of Life Sciences, Liaoning University, Shenyang, 110136, China b 9 10 Running head: Coordination of swarming motility and polysaccharides 11 12 # Corresponding author. Present address: 13 State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese 14 Academy of Sciences, Beijing 100101, China. Tel: 86-10-64807437; Fax: 15 86-10-64806101. E-mail: [email protected] 16 17 18 19 20 21 AEM Accepts, published online ahead of print on 29 August 2014 Appl. Environ. Microbiol. doi:10.1128/AEM.01237-14 Copyright © 2014, American Society for Microbiology. All Rights Reserved.

Coordination of swarming motility, biosurfactant synthesis ...€¦ · 2 22 ABSTRACT 23 Biofilm formation is a complex process with many factors involved. Bacterial swarming 24 motility

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Page 1: Coordination of swarming motility, biosurfactant synthesis ...€¦ · 2 22 ABSTRACT 23 Biofilm formation is a complex process with many factors involved. Bacterial swarming 24 motility

1

Coordination of swarming motility, biosurfactant synthesis, and 1

biofilm matrix exopolysaccharides production in Pseudomonas 2

aeruginosa 3

4

Shiwei Wanga, Shan Yu a, Zhenyin Zhanga, Qing Weia, Lu Yana, Guomin Aia, Hongsheng 5

Liub, Luyan Z. Maa# 6

State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese 7

Academy of Sciences, Beijing 100101, Chinaa; 8

College of Life Sciences, Liaoning University, Shenyang, 110136, Chinab 9

10

Running head: Coordination of swarming motility and polysaccharides 11

12

#Corresponding author. Present address: 13

State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese 14

Academy of Sciences, Beijing 100101, China. Tel: 86-10-64807437; Fax: 15

86-10-64806101. E-mail: [email protected] 16

17

18

19

20

21

AEM Accepts, published online ahead of print on 29 August 2014Appl. Environ. Microbiol. doi:10.1128/AEM.01237-14Copyright © 2014, American Society for Microbiology. All Rights Reserved.

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2

ABSTRACT 22

Biofilm formation is a complex process with many factors involved. Bacterial swarming 23

motility and exopolysaccharides both contribute to biofilm formation, yet it is unclear 24

how bacteria coordinate the swarming motility and the production of exopolysaccharides. 25

Psl and Pel are two key biofilm matrix exopolysaccharides in Pseudomonas aeruginosa. 26

This opportunistic pathogen has three types of motilities including swimming, twitching, 27

and swarming. Here we demonstrated that elevated Psl and/or Pel production reduced 28

swarming motility of P. aeruginosa, but had little effect on swimming and twitching. The 29

reduction was due to decreased rhamnolipids production with no relation to the 30

transcription of rhlAB, two key genes involved in biosynthesis of rhamnolipids. 31

Rhamnolipids negative mutants rhlR and rhlAB synthesized more Psl, whereas 32

exopolysaccharide-deficient strains exhibited hyper-swarming phenotype. These results 33

suggested that competition for common sugar precursors catalyzed by AlgC could be a 34

tactic for P. aeruginosa to balance the synthesis of exopolysaccharides and rhamnolipids 35

and to control bacterial motilities and biofilm formation inversely, because the 36

biosynthesis of rhamnolipids, Psl, and Pel all requires AlgC to provide the sugar 37

precursors and an additional algC enhances the biosynthesis of Psl and rhamnolipids. In 38

addition, our data indicated that the increasing of RhlI/RhlR expression attenuated Psl 39

production. This implied that the quorum sensing signals could regulate 40

exopolysaccharides biosynthesis indirectly in bacterial communities. In summary, this 41

study represents a mechanism that bacteria utilize to co-ordinate swarming motility, the 42

synthesis of biosurfactant, and the production of biofilm matrix exopolysaccharides, 43

which is critical for biofilm formation and bacterial survival in environment. 44

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3

45

INTRODUCTION 46

Pseudomonas aeruginosa is a ubiquitous environmental microorganism. This 47

Gram-negative bacterium is also an opportunistic pathogen that can infect the 48

immunocompromised individuals suffering from cystic fibrosis (CF), cancer, severe burn 49

wound, and AIDS. P. aeruginosa causes severe nosocomial infections due to its capacity 50

to form biofilms on medical devices and in the lungs of immunocompromised patients (1, 51

2). Thus it becomes an important model organism for the study of biofilm. Bacterial 52

biofilms are surface-associated and multicellular-structured communities of 53

microorganisms. Biofilm formation is a complex process that involves many factors such 54

as the production of extracellular polymeric substances, quorum sensing (QS) signals, 55

and bacterial motilities. However, how bacteria coordinate these multiple factors remains 56

elusive. 57

58

Exopolysaccharide is an important biofilm matrix component. Studies have shown that 59

the production of exopolysaccharides impacts the formation of biofilm (3-5). In P. 60

aeruginosa, Psl and Pel are two major exopolysaccharides that serve as biofilm matrix 61

components (4, 6-8). Psl is a repeating pentasaccharide containing D-mannose, D-glucose 62

and L-rhamnose and is an essential matrix component for P. aeruginosa to initiate biofilm 63

and maintain biofilm structure (3, 4, 8, 9). Loss of Psl production greatly attenuates the 64

biofilm formation of P. aeruginosa, yet enhanced Psl production results in a 65

hyper-biofilm with many mushroom-like microcolonies (3). In addition, Psl can also 66

function as a signal to stimulate the biofilm formation of P. aeruginosa (10). Pel is a 67

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4

glucose-rich exopolysaccharide that promotes bacterial cell-cell aggregation and is 68

required for the formation of pellicles at the air-liquid interface of standing cultures (5-7). 69

Ma et al. (11) has reported that the biosynthesis of Psl and Pel both require AlgC, a 70

bifunctional enzyme with both phosphomannomutase and phosphoglucomutase activities, 71

which provides the common sugar precursors mannose-1-phosphate (Man-1-P) and 72

glucose-1-phosphate (Glc-1-P). Glc-1-P is shunt into distinct metabolic pathway to 73

synthesize more immediate precursors, UDP-D-Glc and TDP-L-Rha for the biosynthesis 74

of Psl and UDP-D-Glc for the biosynthesis of Pel (9, 12, 13). It was suggested that there 75

was a competition for common sugar precursors between the biosynthesis pathways of 76

Psl and Pel according to the phenomena that induction of Pel resulted in a reduction of 77

Psl levels at post-transcriptional level (11). 78

79

Bacterial motilities also contribute to the biofilm formation and architecture. P. 80

aeruginosa has at least three types of motilities, including flagella-driven swimming, 81

Type-IV Pili (T4P)-mediated twitching along surfaces, and swarming on semisolid 82

surfaces. Flagella and T4P both contribute to the initial attachment of P. aeruginosa, the 83

first step in biofilm formation (14). Shrout et al. (15) showed that swarming motility 84

affects the biofilm architecture. Hyper-swarming motility results in a flat and uniform 85

biofilm, while lower swarming motility leads to bacterial aggregates and the formation of 86

microcolonies. Swarming motility is a result of complex multi-cellular activity that 87

requires flagella and T4P as well as the presence of biosurfactants (16-18). The 88

biosurfactant produced by P. aeruginosa is mainly rhamnolipids (RL), which contains 89

mono-rhamnolipids (mono-RL), di-rhamnolipids (di-RL) and 3-(3-hydroxyalkanoyloxy) 90

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5

alkanoic acids (HAA) (19, 20). The biosynthesis of RL is a sequential process. The RhlA 91

(acyltransferase) is involved in the synthesis of HAA (19, 21). The rhamnosyl transferase, 92

RhlB catalyzes the transfer of TDP-L-Rha to a molecular of HAA to form a mono-RL. 93

The second rhamnosyltransferase, RhlC sequentially transfers the rhamnosyl group to 94

mono-RL to form di-RL (22). The transcription of rhlAB operon and rhlC are both 95

regulated by the RhlI/RhlR QS system (23, 24). Deletion of either rhlI or rhlR results in 96

the loss of RL production. The biosynthesis of RL also requires AlgC because TDP-L-Rha 97

is converted from the sugar precursor Glc-1-P, which is catalyzed by AlgC (25). 98

99

It has been known that the concentration of intracellular second messenger 100

cyclic-di-GMP (c-di-GMP) can regulate the production of exopolysaccharide and 101

bacterial motilities. High level of intracellular c-di-GMP reduces motilities and elevates 102

the biosynthesis of exopolysaccharides including Psl and Pel. In contrast, low level of 103

c-di-GMP increases motilities and reduces exopolysaccharides production. The bacterial 104

motilities regulated by c-di-GMP usually affect the activities of flagellum and T4P (10, 105

26-28). However, it is unclear whether there are any c-di-GMP-independent mechanisms 106

to balance the motilities and exopolysaccharides production. Recently, Wang et al. (29) 107

reported that bacterial migration mediated by T4P led to the formation of a Psl 108

polysaccharide fiber matrix, which plays a significant role to ensure efficient biofilm 109

formation, especially at high shear flow conditions. In the present study, we showed that 110

the production of exopolysaccharides affected the swarming motility of P. aeruginosa by 111

controlling RL production. At the same time, our data also implied a plausible indirect 112

way for P. aeruginosa to coordinate the production of exopolysaccharides via the QS 113

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6

system. 114

115

MATERIAL AND METHODS 116

Bacterial strains and media. P. aeruginosa strains used in the study are shown in Table 117

1. Unless otherwise indicated, P. aeruginosa was typically cultured in Luria-Bertani 118

medium without sodium chloride (LBNS). For rhamnolipids extraction, rhlAB-lacZ 119

transcriptional analysis, and Psl polysaccharide preparation, corresponding strains were 120

grown in nutrient broth (8 g/L of Oxoid Nutrient Broth and 5 g/L of D-glucose) at 37°C. 121

122

Motility assay. Twitching (1.2% agar) and swimming (0.3% agar) motility assay were 123

performed as previously described by using LBNS or Jensen’s media (30, 31). Swarming 124

motility assay were performed as previously described by using Nutrient Broth with 0.5% 125

Difco Bacto agar and different concentrations of arabinose. After inoculation, swarming 126

plates were incubated for another 12-24 h at 37°C until swarming zones formed. The 127

images were captured by Chemidoc XRS+, MAGELAB (Bio-Rad, USA). The diameter 128

of swarming zone was calculated by average of the longest and shortest diameter of 129

corresponding swarming colony. At least three replicates were measured for each sample. 130

131

Construction of transcriptional fusion strains, rhlAB deletion mutant and rhlRI 132

inducible strains. For transcriptional fusion strains construction, a 432-bp DNA 133

fragment containing the promoter of the rhlAB operon was amplified from the genomic 134

DNA of PAO1 by PCR using the primer pair PrhlAF1 (italic letters denote restriction 135

enzyme sites) (5’-GGGGTACCAAAGCCTGACGCCAGAGC-3’) and PrhlAR1 136

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7

(5’-CGGGATCCTTCACACCTCCCAAAAATTTTC-3’). The PCR product was digested 137

with Kpn I and BamH I, and then ligated to Kpn I/BamH I-cut mini-CTX-lacZ vector to 138

generate the plasmid pSW4 (a fusion of rhlAB with lacZ). pSW4 was conjugated into the 139

chromosomal attB sites of the P. aeruginosa strains as described previously (32). For 140

rhlAB in-frame deletion, the following PCR primers were used (italic letters denote 141

restriction enzyme sites): primer 1 (F1-del-rhlAB, 142

5’-CCCAAGCTTGCACGCTGAGCAAATTGTTC-3’), primer 2 (R1-del-rhlAB, 143

5’-GAGTATCCATATGAACGGTGCTGGCATAACAG-3’), primer 3 (F2-del-rhlAB, 144

5’-GAGTATCCATATGGAACGGCAGACAAGTAAC-3’), and primer 4 (R2-del-rhlAB, 145

5’-CCGGAATTCTCCAATACCACCAACCTG-3’). Deletion alleles were cloned into 146

pEX18Gm vector and the resulting plasmid was used to knock out rhlAB by allelic 147

exchange (33). For rhlRI inducible strains construction, a pair of primer were used (italic 148

letters denote restriction enzyme sites): primer 5 149

(CTAGTCTAGAATGAGGAATGACGGAGGC) and primer 6 150

(CCCAAGCTTTCACACCGCCATCGACAG) to amplify the 1.5 kb rhlRI fragment. The 151

rhlRI were cloned into pHerd20T vector to get PBAD-rhlRI Plasmid. The plasmid was 152

transformed into PAO1 and its isogenic ΔrhlR mutant respectively to obtain the 153

rhlRI-inducible strains PAO/rhlRI and ΔrhlR/rhlRI. 154

155

β-galactosidase assays. β-galactosidase activity was quantitatively assayed as previously 156

described with modifications (34). P. aeruginosa strains were grown in nutrient broth 157

with or without arabinose at 37°C to middle-log phase (OD600 ≈0.5). One milliliter 158

culture aliquots were re-suspended in 200 μL Z-buffer and subjected to three 159

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8

frozen/thawed cycles. Cell lysates were assayed for β-galactosidase activity, and also for 160

total protein concentration using a BCA assay kit (Pierce, USA). All β-galactosidase 161

activity units (Miller Unit) were normalized by total protein per mL aliquots. All samples 162

were done in triplicates. 163

164

Biofilm growth and microscopy image acquisition. The air-liquid interface biofilm 165

growth was referred to the previous method (29). Fluorescent images were acquired by an 166

Olympus FV1000 (Olympus, Tokyo, Japan). Images were obtained using 63×/1.3 167

objective. A Fluoview image browser generated the 3D images and optical Z-sections. 168

CLSM-captured images were subjected to quantitative image analysis using COMSTAT 169

software as previously described (35). 170

171

Rhamnolipids extraction, quantitation and TLC detection. After 2-day growth in 172

nutrient broth with or without arabinose, rhamnolipids was extracted as previously 173

described (36). Briefly, cells were removed from the culture by centrifugation (10 min at 174

6,000×g), and the supernatant was acidified with concentrated HCl until it reached pH 2.0. 175

Equal volume of chloroform-methanol mixture was added to the acidified supernatant 176

and then the sample was vortexed for 1 min. The lower organic phase was collected and 177

evaporated to dryness, and then re-suspended in 3 mL methanol. The rhamnolipids in the 178

extract were measured by using the anthrone colorimetric assay and the concentration 179

was obtained by using a rhamnose standard curve (21). The rhamnolipids produced by 180

different strains were normalized to the level of rhamnolipids obtained from PAO1. The 181

samples were also analyzed by TLC on silica gel G plates with a mobile phase consisting 182

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9

of 80% chloroform, 18% methanol and 2% acetic acid, and rhamnolipids were examined 183

with a 25 mg/mL solution of α–naphthol. Rhamnolipids standards were obtained from 184

Huzhou Zijin Co. (China) (the main m/z peaks of mono-RL and di-RL are 503 and 649 185

respectively). 186

187

LC/MS analysis of rhamnolipids. Quantification comparison of mono-RL (Rha-C10-C10) 188

and di-RL (Rha-Rha-C10-C10) was furthermore performed by using liquid 189

chromatograph/mass spectroscopy as previously described with modification (19, 37). 190

The analyses were performed with triple-quadrupole mass spectrometer Agilent 191

1260/6460 LC/MSD (Agilent Technologies USA, Santa Clara) using electrospray 192

ionization in negative mode. The 3,000-fold diluted samples (5 uL) were introduced by 193

HPLC with an 100 mm×2.1 mm Agilent ZORBAX SB-Aq reverse phase column 194

(particle size 5 μm). Runs were carried out in 5 mM HCOONH4, using a multi-step 195

gradient of acetonitrile, 0-3 min (20%), 3-20 min (20%-90% linear gradient), 20-26 min 196

(90%), 26-28 min (90%-20%), and 28-40 min (20%). The HPLC flow rate was 0.3 197

mL/min. The MS-conditions were: Nebulizer gas (N2) 35 psi, dry gas (N2) 12 L/min, dry 198

temperature 350°C and capillary voltage 4,000 V. The scanning mass range was from 200 199

to 900 Da. Mono-RL (m/z=503) and di-RL (m/z=649) relative abundance of different 200

samples were respectively normalized to the level of PAO1. 201

202

Drop collapse assay. Drop collapse assays were performed as previously described with 203

minor modification (19, 38). Briefly, after two days incubation at 37°C in liquid nutrient 204

broth medium with or without arabinose, culture samples were centrifuged at 6,000×g for 205

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10

10 min to remove the bacteria. The supernatant was filtered through a 0.22-μm membrane 206

and serially diluted with Milli-Q dH2O. Aliquots (10 μL) of the diluted supernatant were 207

spotted on the lid surface of a Nunc 96-well plate to detect bead formation. Samples that 208

did not form a bead were defined as having drop collapse activity. 209

210

Immunoblot analysis to detect Psl polysaccharide and PelC protein. Psl 211

polysaccharide was extracted from 5 OD overnight culture. Psl extracts were detected by 212

immunoblotting with anti-Psl serum as described previously (9). The induction of Pel was 213

assayed by immunoblotting with anti-PelC serum with modifications (5). Briefly, one 214

milliliter of culture (OD600 of 0.5) was harvested and re-suspended in 200 μL PBS. After 215

mixing with an equal volume of 2× Laemmli buffer and boiled for 5 min, protein 216

concentration was measured using the BCA assay (Pierce, USA). Equal total protein 217

was loaded on PVDF membrane for Immunoblotting.. Psl and Pel polysaccharide were 218

relatively quantified according to the gray value calculation after dotblotting experiment 219

and normalized to corresponding reference strains. 220

221

RESULTS 222

Increased Psl and Pel production reduces swarming motility of P. aeruginosa 223

To investigate whether the production of Psl and/or Pel polysaccharides affects motility 224

of P. aeruginosa, we used several arabinose-inducible strains derived from P. aeruginosa 225

PAO1, in which the promoter of Psl and/or Pel gene operon was replaced by PBAD 226

promoter on chromosome (Table 1). Thus the production of Psl and/or Pel can be induced 227

by arabinose (the inducer). The induction of Psl/Pel was tested by immunoblotting and 228

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11

1% arabinose displayed a maximum induction (Polysaccaride Psl and PelC were 229

increased approximately three to four-fold in addition of 1% arabinose )(11 and data not 230

shown). The swarming assay showed that increase of either Psl and/or Pel production 231

significantly reduced swarming ability (Fig. 1). Addition of arabinose from 0.005% to 232

0.5% (W/V) caused a gradual reduction of swarming zones in the three 233

polysaccharide-inducible strains, Psl-inducible strain WFPA801, Pel-inducible strain 234

WFPA831 as well as Psl and Pel double-inducible strain WFPA833. WFPA801 exhibited 235

more severe effect than WFPA831, as the swarming zone of WFPA801 was totally 236

abolished with 0.5% arabinose while WFPA831 still had a visible swarming zone at the 237

same condition (Fig. 1A). For wild type PAO1 strain, arabinose had little effect on its 238

swarming zone even at the concentration of 1% (Fig. 2B). Furthermore, 1% arabinose 239

had no impact on the motilities of negative control strains, ΔfliC strain (flagella-deficient 240

strain), ΔpilA (T4P-deficient strain) and ΔalgC strain (RL synthesis-deficient strain) (data 241

not shown). These results indicated that increase of Psl/Pel production reduced bacterial 242

swarming motility. Since swarming motility requires the presence of flagella and T4P 243

(16-18), we examined the effect of Psl and/or Pel production on flagella-mediated 244

swimming and T4P-driven twitching motilities. The results showed that swimming (Fig. 245

1B) and twitching (Fig. 1C) abilities of these three strains were similar at the condition 246

with 1% arabinose or 0% arabinose, suggesting that Psl/Pel production did not affect the 247

function of flagella and T4P. These results indicated that reduction of swarming ability by 248

Psl and/or Pel production may occur through a different mechanism other than 249

controlling the activities of flagella and T4P. 250

251

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12

Overproduction of Psl and/or Pel decreases rhamnolipids production. 252

Swarming motility requires the presence of biosurfactant in addition to flagellum and T4P 253

(16-18). Thus we hypothesized that the effect of Psl/Pel production on swarming may be 254

through the control of biosurfactant synthesis. Surface tension of liquid drops correlates 255

with biosurfactant concentration (38). Thus drop collapse on a hydrophobic surface 256

provides a quick way to estimate the biosurfactant concentration of the fermentation 257

broth. In the assay, culture supernatants were serially diluted with water and the drops 258

containing higher amounts of biosurfactants would require more dilution to reach the 259

point to prevent the collapse. We utilized this assay to examine the culture supernatant of 260

wild-type strain (PAO1) and Psl/Pel-inducible strains grown with and without arabinose. 261

The culture supernatant of PAO1 showed a similar pattern of drop collapse in the 262

presence of 0% or 1% arabinose (Fig. 2A), suggesting that addition of arabinose did not 263

affect the drop collapse and that the concentrations of biosurfactant were similar in the 264

PAO1 cultures with/without arabinose. In contrast, the drop collapse of WFPA801 and 265

WFPA831 appeared different while comparing the cultures grown with and without 266

arabinose (Fig. 2A). Without arabinose, all the cultures exhibited similar drop collapse 267

patterns and their drop collapse was inhibited at eight-fold dilution. With 1% arabinose , 268

four-fold dilution did not lead to drop collapse of WFPA831 and even two-fold dilution 269

did not collapse the culture drop of WFPA801 (Fig. 2A). This result suggested that there 270

were less biosurfactants in Psl/Pel-overproduced condition (1% arabinose) than Psl/Pel 271

non-induced condition (0% arabinose). 272

273

To quantify the amount of biosurfactants, we extracted and compared the total RL from 274

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13

cultures of three Psl/Pel-inducible strains grown with 0% or 1% arabinose. The 275

corresponding swarming zone of these strains was also shown under each corresponding 276

image (Fig. 2B). The wild type strain PAO1 showed similar swarming zone and RL 277

production in the presence of 0% or 1% arabinose (indicated by the number under the 278

corresponding images in Fig. 2B). In contrast, the swarming of the three inducible strains 279

was totally inhibited by 1% arabinose (Fig. 2B, compare the upper panel with the lower 280

panel). Consistently, the total amount of RL extracted from three inducible strains was 281

also significantly decreased with 1% arabinose (the lower panel in Fig. 2B). The total RL 282

in strain WFPA801, WFPA831, and WFPA833 were reduced to 48%, 65% and 46% 283

relative to the PAO1 level respectively. The results were consistent with the drop collapse 284

assay and indicated that elevated Psl/Pel production reduced the biosynthesis of RL. 285

286

RL produced by P. aeruginosa usually contains a mixture of mono-RL and di-RL (39). To 287

further investigate the effect of Psl/Pel on the RL production, we first used thin-layer 288

chromatography (TLC) to examine the total RL for separation of the mono-RL and 289

di-RL based on their different retention factors (Fig. 3A). The TLC results showed 290

mono-RL and di-RL remarkably reduced in the Psl-induced condition (WFPA801+1% 291

arabinose) as well as the Psl and Pel double-induced condition (WFPA833+1% arabinose) 292

(Fig. 3A). As for the Pel-inducible strain WFPA831, only mono-RL showed a visible 293

reduction with 1% arabinose (Fig. 3A). The corresponding RL extracts were also 294

quantified by LC/MS (Fig. 3B-E) and the results further confirmed our conclusion from 295

TLC analysis. The Rha-C10-C10 and Rha-Rha-C10-C10 were the main peaks of mono-RL 296

and di-RL (15, 19, 37). The corresponding quantification of the two peaks was shown in 297

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14

Fig. 3B-E. The LC/MS results showed that there was a remarkable reduction compared to 298

PAO1 for the Rha-C10-C10 from three inducible strains with 1% arabinose (more than 299

50% reduction) (Fig. 3C). The Rha-Rha-C10-C10 from WFPA801 and WFPA833 also 300

showed 50% reduction compared to PAO1 with 1% arabinose, but WFPA831 only 301

showed 25% reduction at the same condition (Fig. 3E). Interestingly, the Rha-C10-C10 and 302

Rha-Rha-C10-C10 from three inducible strains grown without arabinose were increased in 303

different degrees compared to PAO1 (Fig. 3C and E). This was consistent with the results 304

of the total RL extract shown in the upper panel of Fig. 2B, in which RL of three 305

Pel/Pel-inducible strains without inducer exhibited approximately 30% increase 306

compared to PAO1 level . Taken together, our data indicateded that enhanced Psl or Pel 307

production reduced the synthesis of the biosurfactant RL, which could be the reason why 308

over-produced Psl/Pel decreased swarming motility of P. aeruginosa. 309

310

In order to know whether the reduction of rhamnolipids occurred at the gene 311

transcriptional level, we constructed PrhlAB-lacZ transcriptional fusion in wild type and the 312

Psl and/or Pel-inducible strains to detect the transcription of rhlAB operon. The 313

β-galactosidase analysis showed that the transcription of rhlAB was similar in all tested 314

strains regardless of the concentration of arabinose supplemented in cultures (Fig. 2B), 315

indicating that the production of Psl and Pel do not affect the transcription of rhlAB and 316

suggesting that RL reduction by polysaccharides occurs post-transcriptionally. 317

318

RL-deficient strains produced more Psl. 319

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15

To investigate whether the production of RL impact the Psl synthesis, we examined two 320

RL-deficient strains, rhlR and rhlAB mutants. Both mutants lost the ability to synthesize 321

RL, thus cannot swarm (Fig. 4A). The detection of Psl by anti-Psl serum showed that the 322

two mutants both produced more Psl than PAO1 (Fig. 4A). This data indicated that 323

abolishing the RL synthesis in P. aeruginosa can increase Psl production. 324

325

Psl-negative strains had a hyper-swarming phenotype. 326

To test whether loss of Psl also affect swarming, we have used several Psl-negative 327

strains. Deletion of pslA, the first gene of psl operon, resulted in the loss of Psl production 328

(9). Thus we first tested the swarming of ΔpslA, which exhibited a hyper-swarming 329

phenotype. Its swarming was 2.4-fold larger than that of PAO1 (Fig. 4A). Consistently, 330

the total RL of ΔpslA had 20% increase compared to PAO1 (Fig. 4A). 331

332

Growth of P. aeruginosa in biofilms and chronic CF airway infections generates rugose 333

small-colony variants (RSCVs) (41). Both clinic- and in vitro-derived biofilm RSCVs 334

display increased production of the Pel and Psl polysaccharides and loss of motility due 335

to elevated cellular c-di-GMP level (41). To investigate whether the effect of 336

polysaccharide production on swarming holds true in RSCVs, we examined a RSCV 337

derived from a laboratory-grown biofilm of PAO1, MJK8 and its isogenic pel and psl 338

mutants (Table 1) (42). MJK8 and its pel or psl single deletion mutant could not swarm, 339

however pel and psl double mutant did recover the swarming to 70% of PAO1 level 340

(Fig. 4B). It is a remarkable change because the biosynthesis and activity of flagellum are 341

inhibited by high level of c-di-GMP in MJK8 (42). Strikingly, the total RL of 342

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16

MJK8ΔpelΔpsl was more than PAO1, and similar to PAO1ΔpslA strain (Fig.4A). 343

Moreover, the total RL production of MJK8 were also similar to that of WFPA833 344

(PBAD-psl and PBAD-pel) with 1% arabinose (Fig. 2B, lower panel). These data indicated 345

the impact of Psl/Pel production on swarming and the biosynthesis of RL were not only 346

found in the artificial PBAD-induced system, it also occurred in physiologically relevant 347

polysaccharide overproducing strain. 348

349

Coordination between synthesis of exopolysaccharides and rhamnolipids is likely 350

mediated by competitions for common sugar precursors. 351

Over-produced Psl/Pel decreased the synthesis of RL, yet lacking of RL synthesis 352

increased the production of Psl. This phenomena was similar to the previous report about 353

the biosynthesis of Psl, alginate and lipopolysaccharide, which competed with each other 354

for the common sugar precursor Man-1-P converted by AlgC (11). It has been suggested 355

that the synthesis pathways of Psl and Pel compete for the sugar precursor Glc-1-P 356

catalyzed by AlgC (11). As the synthesis of rhamnolipids also requires AlgC to provide 357

the common sugar precursor Glc-1-P (25) and the above data indicated there was 358

coordination between the biosynthesis of Psl/Pel and RL, this suggested that there was 359

very likely a competition for common sugar precursors among the biosynthesis pathways 360

of RL, Psl, and Pel (Fig. 5A). Since AlgC is the only enzyme in P. aeruginosa to catalyze 361

the Glc-1-P for Psl, RL, and Pel, we assumed that an additional copy of algC expressed in 362

plasmid should increase the production of Psl and RL. To test this hypothesis, we 363

compared the production of Psl, RL, andthe swarming of PAO1 containing plasmid 364

pLPS188 with constitutively expressed algC(PAO1/algC) and PAO1 with vector 365

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17

(PAO1/vector ). In support of the hypothesis, PAO1/algC showed a hyper-swarming 366

pattern and produced more RL and Psl than PAO1/vector (Fig. 5B-D). In summary, our 367

data suggested that the bio-synthesis of Psl, Pel and rhamnolipids shared the common 368

sugar precursors and led to the coordination between swarming motility and biosynthesis 369

of exopolysaccharide Psl and Pel. 370

371

Enhanced expression of RhlR/RhlI can decrease the Psl production. 372

RL production is strictly regulated by RhlR/RhlI QS system. Once RhlR binds the QS 373

signal molecule synthesized by RhlI, it activates the transcription of rhlAB to synthesize 374

RL. Based on the precursors competition theory proposed above (Fig. 5A), increasing RL 375

would reduce the Psl production if more common sugar precursors were used for the RL 376

biosynthesis. Then enhanced expression of RhlR/RhlI would decrease the synthesis of Psl. 377

To test this hypothesis, we constructed the PBAD-rhlRI by using pHerd20T as vector. The 378

PBAD-rhlRI plasmid was transformed into PAO1 and rhlR mutant respectively to obtain 379

two rhlRI-inducible strains PAO1/rhlRI and ΔrhlR/rhlRI. Psl synthesis of both strains 380

reduced gradually while the expression of rhlRI was induced by various concentration of 381

arabinose (from 0.2% to 1%) (Fig. 6B). The swarming zone (Fig. 6A) and RL production 382

(Fig.6B) were also increased accordingly. This data suggested that the RhlR/RhlI QS 383

system can influence the Psl production through the regulation of RL expression. The 384

results also confirmed that there was a competition for the common sugar precursors 385

between the biosynthesis pathway of Psl and RL, given that increasing of RL biosynthesis 386

reduced the production of Psl (Fig.6B) and vise versa (Fig.2B). 387

388

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18

DISCUSSION 389

Exopolysaccharides and motility are significant contributing factors to the formation of 390

bacterial biofilms. Understanding how exopolysaccharides and motility cooperate to 391

shape the architecture of biofilm will shed lights on the development of strategies against 392

biofilm-related concerns, such as chronic and persistent infections. In this study, we 393

demonstrated that the production of exopolysaccharides Psl and Pel affected bacterial 394

swarming, but not swimming and twitching. This was accomplished by control of 395

rhamnolipids production . 396

397

Recently, it was discovered that Psl can also function as a signaling molecule to stimulate 398

diguanylate cyclases to produce more intracellular second messenger cyclic-di-GMP 399

(c-di-GMP) (10), which is known to regulate the production of polysaccharide and 400

bacterial motilities. Elevated intracellular concentrations of c-di-GMP reduced bacterial 401

motilities by affecting the activities of flagellum and T4P (10, 26-28). Our data showed 402

that the production of Psl and Pel had little impacts on bacterial swimming and twitching 403

motilities (Fig. 1B and C), indicating that activities of flagellum and T4P was not 404

inhibited. This also suggested that c-di-GMP had little contribution on the effect of Psl 405

and/or Pel on swarming motility and RL production. More evidences were come from the 406

results of MJK8. This RSCV strain has high level cellular c-di-GMP (42), even so, 407

delettion of psl and pel in MJK8 recovers its RL production and some swarming motility 408

(Fig. 4B). 409

410

We proposed that biosynthesis of Psl, Pel and rhamnolipids competes for common 411

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19

sugar precursors. Psl is a repeating pentasaccharide containing D-Man, D-Glc and 412

L-rhamnose (9). The rhamnose and glucose precursor are both converted from Glc-1-P 413

synthesized by AlgC (Fig. 6A). D-Man is converted from Man-1-P (which is also 414

catalyzed by AlgC) and is shared by the biosynthesis pathways of Psl, alginate, and LPS. 415

We showed in this study that Psl production led to more severe inhibition on swarming 416

motility and RL synthesis than the glucose-rich exopolysaccharide Pel (Fig. 1-3). One 417

explanation for this phenomenon is that the synthesis of Psl may use more sugar 418

precursors catalyzed by AlgC than that of Pel. P. aeruginosa RL usually contains a 419

mixture of mono-RL and di-RL. Various RLs play different roles in swarming motility. 420

Mono-RL acts as wetting agents, di-RL promotes tendril formation and migration, and 421

they work together to form swarming pattern of P. aeruginosa (39). Our TLC and LC/MS 422

results indicated that Pel production had a similar decreasing effect on mono-RL as that 423

of Psl, yet had little effect on di-RL. This can be a fine tune for the ratio of mono-RL and 424

di-RL. RLs not only play critical roles in the biofilm formation of P. aeruginosa (43, 44), 425

but also serve as an important biosurfactant due to their wide applications in oil recovery, 426

cosmetic, and environmental protection, etc. (20). Thus, our results could also provide 427

potential strategies for industry to upgrade RL production. 428

429

Quorum-sensing (QS) circuits allow bacteria to coordinate their gene expression in a cell 430

density-dependent manner. P. aeruginosa employs three QS signaling systems 431

(LasR/LasI, RhlR/RhlI and PQS). So far, little is known about the involvement of QS in 432

the regulation of exopolysaccharides in P. aeruginosa. Our data suggested that the 433

RhlR/RhlI signaling system may indirectly control Psl and/or Pel production by 434

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coordinating RL production. The synthesis of RL is regulated by the RhlR/RhlI system, 435

which is activated during the maturation stage of P. aeruginosa biofilm development (45). 436

It has been reported that little Psl is found in the center of the microcolony at the 437

maturation stage, which is associated with the preparation of future seeding dispersal (4). 438

The center of the microcolony is the micro-environment with the densest bacterial 439

population and the up-regulated RhlR/RhlI, which activates the synthesis of RL. 440

Increasing the synthesis of RL enhances swarming and may further reduce the production 441

of exopolysaccharide. This may be a strategy in which P. aeruginosa balances the 442

polysaccharide production and bacterial motility during biofilm development to allow 443

seeding dispersal to occur. Consistent with this scenario, the biofilm of a hyper-RL 444

producer yields an earlier seeding dispersal compared to the wild-type strain PAO1 (44). 445

446

Swarming is the fastest known bacterial mode of surface translocation and enables the 447

rapid colonization of a nutrient-rich environment and host tissues. In this study, we 448

revealed how P. aeruginosa coordinate the production of biofilm exopolysaccharides and 449

the swarming motility without affecting the flagella and T4P. This was accomplished by 450

competition for common sugar precursors between the biosynthesis pathway of 451

exopolysaccharides and the biosurfactant RL. Since RL synthesis in P. aeruginosa is 452

regulated by the QS signaling system and the reduction or increase of RL and RhlRI can 453

impact the production of exopolysaccharides, our data suggested a plausible strategy how 454

QS signals may regulate biofilm matrix exopolysaccharides and swarming motilities in 455

bacterial communities in a coordinating manner. 456

457

ACKNOWLEDGEMENTS 458

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21

The authors thank Dr. Alan K Chang at Liaoning University, Dr. Di Wang at Institute of 459

Microbiology, Chinese Academy of Sciences for their contribution to the revision of the 460

manuscript and Dr. Matthew Parsek at University of Washington for providing the 461

anti-PelC serum and MJK8 strains. This work was supported by Chinese Academy of 462

Science grant KSCXZ-YW-BR-5 (L.M.) and National Natural Science Foundation of 463

China grant 31270177 (L.M.), National Basic Research Program of China (973 Program, 464

grant 2014CB846002)(L.M.). 465

466

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Genomics 8:287. 620

621

622

623

624

625

626

627

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29

Table 1. P. aeruginosa strains used in this study 628

Strains Relevant charateristic(s)a or sequence Reference/source

PAO1 Wild type, Psl+, Pel+ (46)

PA14 An isolate commonly used in the laboratory, Psl-, Pel+ (7)

WFPA801 Psl-inducible strain, PBAD-psl, PAO1 (3)

WFPA831 Pel-inducible strain, PBAD-pel, PAO1 (11)

WFPA833 Psl and Pel double-inducible strain,

PBAD-psl and PBAD-pel, PAO1 This study

IMPA114 PrhlAB-lacZ integrated into attB site of PAO1 This study

IMPA115 PrhlAB-lacZ integrated into attB site of WFPA801 This study

IMPA116 PrhlAB-lacZ integrated into attB site of WFPA831 This study

IMPA117 PrhlAB-lacZ integrated into attB site of WFPA833 This study

PAO1/pUCP18 PAO1 containing pUCP18 vector, Apr This study

PAO1/pLPS188 PAO1 containing pLPS188, a plasmid has constitutively

expressed algC, Apr (11)

PAO1/rhlRI PAO1 containing the plasmid with PBAD-rhlRI in

pHerd20T vector, Apr This study

ΔrhlR/rhlRI PAO1ΔrhlR the plasmid with PBAD-rhlRI in pHerd20T

vector, Apr, Apr This study

PAO1ΔrhlAB PAO1, rhlAB in-frame deletion This study

PAO1ΔfliC PAO1, fliC (encoded flagellin) in-frame deletion (11)

PAO1ΔpilA PAO1, pilA (encoded pilin) in-frame deletion (11)

PAO1ΔalgC PAO1, algC::Tc, Tcr (47)

WFPA803 PAO1, ΔalgC, PBAD-psl (11)

CIM1 PAO1, ΔalgC, PBAD-pel (11)

PAO1ΔrhlR PAO1, rhlR::Gm, Gmr (48)

PAO1ΔgalU PAO1, galU::Gm, Gmr (9)

PAO1ΔpslA PAO1, pslA in-frame deletion (9)

MJK8 Rugose small-colony variant, isolated from aged

biofilm of PAO1 (42)

MJK8Δpsl MJK8, pslBCDE in-frame deletion (42)

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30

MJK8Δpel MJK8, pelA in-frame deletion (42)

MJK8ΔpslΔpel MJK8, pslBCDE and pelA in-frame deletion (42)

a: Abbreviations: Tcr, tetracycline resistant; Gmr, gentamicin resistant; Apr, ampicillin resistant. 629

630

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631

Figure legends 632

FIG 1 The motilities of the Psl/Pel-inducible strains (WFPA801, 831, and 833) under 633

various concentrations of arabinose (inducer). (A) Swarming patterns at 0% to 0.5% 634

arabinose. (B) Swimming zone with 0% or 1% arabinose. (C) Twitching zone with 0% or 635

1% arabinose. The numbers on images indicated the diameter of corresponding 636

swimming or twitching zone; PAO1ΔfliC and PAO ΔpilA were used as negative control 637

for swimming and twitching motility respectively. 638

639

FIG 2 Overproduction of Psl and/or Pel polysaccharide decreases RL production. (A) The 640

drop collapse assay showed a reduction of rhamnolipids in the Psl/Pel-induced strains. 641

The image showed that the bead formation of the culture supernatants from the 642

Psl/Pel-inducible strains grown with/without arabinose. CS, culture supernatants; DW, 643

distilled water; +, 1% arabinose; -, no arabinose. (B) Swarming patterns, swarming zone, 644

total RL production, and the corresponding rhlAB transcription of PAO1, WFPA801, 645

WFPA831 and WFPA833 with 0% or 1% arabinose. Shown under each image were the 646

corresponding quantitative value of swarming zone (the average diameter,cm), total 647

rhamnolipids (RL) and rhlAB-lacZ transcription. The RL extracts were normalized to the 648

level of PAO1 in the absence of arabinose (1=4.9 g/L total RL by dry weight calculation 649

or 284.3 mg/l RL by the anthrone colorimetric assay). The transcription of rhlAB was 650

determined by β-galactosidase activity of PrhlAB-lacZ fusion integrated in chromosome of 651

the corresponding strains. The values were also normalized to PAO1 without arabinose 652

(1=116 Miller Unit). 0, no swarming zone. 653

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32

654

FIG 3 TLC and LC/MS analysis of the total RL extracts from PAO1 and Psl/Pel-inducible 655

strains. (A) TLC analysis of RL extracted from the culture of the corresponding strains 656

grown in the absence (-) or presence (+) of 1% arabinose. (B) LC/MS peak of 657

Rha-C10-C10 (m/z 503) (mono-RL). (C) The relative abundance values of Rha-C10-C10 in 658

corresponding RL extract analyzed by LC/MS. (D) LC/MS peak of Rha-Rha-C10-C10 659

(m/z 649) (di-RL). (E) The relative abundance values of Rha-Rha-C10-C10 in 660

corresponding RL extract analyzed by LC/MS. The relative abundance values of 661

Rha-C10-C10 and Rha-Rha-C10-C10 were normalized to PAO1 level (respectively 662

3,646,111 and 1,653,883 without arabinose and 2,722,080 and 2,223,691 with 1% 663

arabinose). Arrows indicated the corresponding peak for mono-RL and di-RL 664

665

666

FIG 4 The swarming ability, total RL and/or Psl production of RL-deficient mutants and 667

psl/pel mutant strains. (A) Shown are the swarming pattern, corresponding swarming 668

zone, Psl level and total RL of PAO1, the PAO1 isogenic rhlR, rhlAB, pslA and galU 669

mutants; (B) The swarming and RL production of MJK8, its isogenic psl and/or pel 670

mutant, and the native Psl-negative strain PA14. The mean diameter of swarming zone 671

and total RL were presented under each corresponding image. The RL extracts were 672

normalized to the level of PAO1 (214 mg/l). Psl was detected by immunoblotting with Psl 673

antiserum. ++++ indicated that Psl level was 4-fold higher than PAO1. -, Psl negative;0, 674

no swarming zone. ND, not determined. 675

676

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33

FIG 5 The biosynthesis pathways of RL, Psl, and Pel share the common sugar precursor 677

Glc-1-P catalyzed by AlgC. (A) Schematic representation of the P. aeruginosa PAO1 678

metabolic routes for the biosynthesis of Psl, Pel and RL. Solid lines represent known 679

metabolic routes and dashed line represents hypothetic route. (B) Swarming zone of 680

PAO1/algC (algC was constitutively expressed in plasmid pLPS188.) and control strain 681

PAO1/vector. (C) Comparison of RL production in PAO1/algC and PAO1/vector. The 682

amount of RL was normalized to PAO1/vector level (261 mg/l). (D) Comparison of Psl in 683

PAO1/algC and PAO1/vector. 684

685

FIG 6 The effect of rhlR/rhlI QS system on the biosynthesis of Psl polysaccharide. (A) 686

Swarming zone of rhlRI inducible strains PAO/rhlRI and ΔrhlR/rhlRI grown with/ 687

without arabinose. (B) The Psl and RL production of PAO/rhlRI and ΔrhlR/rhlRI under 688

various concentrations of arabinose. The amount of RL was normalized to PAO1/vector 689

level (214±3 mg/l) 690

691

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