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Chemistry UCSD Fall 2015
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Know microscopes Light
Brightfield Electrons
TEM transmission- to study cell organelles. Sees internal SEM scanning- 3D image
Plant Cell Eukaryotic Nucleus Chloroplasts Large central vacuole Cell wall
Animal Cells Eukaryotic No chloroplasts There are vacuoles but not as large No cell wall
Prokaryotes Yes cell walls/capsules Plasmids No mitochondria No nucleus Dna is free floating No organelles Yes ribosomes
Cell organelles Nucleus
Contains dna Chromosomes make up nucleus
Ribosomes Carry out protein synthesis Located in cytosol & rough ER
Endoplasmic Reticulum Smooth ER
Synthesis of lipids & steroids Carbohydrate metabolism Detoxification Calcium Storage
Rough ER Contains Ribosomes so it’s involed in protein synthesis Protein modification
Golgi Apparatus Receives from ER Modifies products of ER
Lysosomes Lys means to break Contain hydrolytic enzymes that digest fats and polysaccharides & nucleic acids Fuse with vesicles and deliver 3 kinds of vesicles
3 kinds of vesicles Endosomes
Engulfed molecules Phagosomes
Take and destruction of pathogens Autophagosomes
Recycle damaged organelles Phagocytosis
Cellular eating Pinocytosis
Cellular drinking Endosymbiant Theory
Mitochondria & chloroplasts Free ribosomes Circular DNA Reproduce independently Double membrane
Mitochondria Produces energy
Chloroplasts Have two parts
Thymakoid stacked
Stroma Internal fluid
Cytoskeleton (road) Support the cell Interacts with motor proteins (cars) Vesicles travel along cytoskeleton Components of cytoskel
Microtubules Made of tubulin
Cilia and flagella 9+2 9 surrounding and 2 in the middle Found in both euk and proks
Centrasome MTOC Peroxisomes
Produce hydrogen peroxide and converts to water? Major fxn is to break down long fatty acids
Vacuole Provides support to soft structures in the cells Plants have larger vacuole
ER -> Golgi -> Vesicles, process called exocytosis ?
LECTURE 3
Phospholipid bilayer Amount of lipid species complexity Two types of movement
Lateral (side ways) Flip flop (top to bottom)
Phosphalidylserines Type of phospholipid Tags cells for death
If theres a cell that disfunctioned, it’ll tag it for death Factors that influence membrane fluidity
Saturated single bonds vs Unsaturated fatty acids double bonds Which has more room for movement? Cholesterol
At warm temps, restrains movement At low temps, it prevents tight packing, [more fluid?]
Membrane proteins Only permeable to gases and hydrophobic molecules? Determine membranes specific function Integral
Transmembrane Monotopic
Peripheral Functions of
Enzymatic activity Single transduction Cell to cell recognition Intercellular joining Attachment to cytoskeleton & EC Transport
Passive no energy needed, down concentration gradient
Active needs energy Osmosis diffusion of water
Ion pumps Electrochemical gradient Co transport Bulk transport Exocytosis going out cell membrane? Endocytosis going in cell membrane?
Cell signaling Direct contact plasma d… Local signaling
Synamptic Involve neruotransmitters?
Long distance signaling Pathway for cell signaling
Perception Transduction Response
Anabolic pathway Consume energy Photosynthesis?
Catabolic Releases energy Cellular respiration?
Delta G negative Reaction is spontaneous Nonspontaneous for delta g positive Reaction is equilibrium at delta g is 0 Cells are open system, shit going in and out so theres no equilibrium for something..
Cofactors and coenzymes Inorganic/organic
Types of inhibitors Competitive
Bind to active site of enzyme Noncompetitive
Binds to another part of the enzyme Not to the active site
Cooperatovoty Feedback inhibition
Anabolic pathway End product would stop the reaction bc it would avoid excess of product Could be competitive or non usually competitive
X ->y -> z -> w W would stop x or anyone of them saying I don’t want more or w’s (me) made
Last lecture
Cellular respiration Heterotrophs
The way they Break down compounds/energy Catabolic pathway ^
Can be split to 2 categories Chemoheterotrophs
Animals break down compounds of food? Photoheterotrophs
Use sunlight as energy in order to break down compounds Cellular respiration
Glycolysis : cytosol, doesn’t need O2 Glucose -> 2 pyruvate
Takes 2 atp (energy investment phase) and generate 4 ATP (energy payoff phase) Take 2 nad+ molecules and generates nadh (electron carriers)
Autotrophs
Organisms that fix CO2, takes co2 from environment and makes a longer carbon chain lets say a fruit?
Photoautotrophs, use sun as energy Chemoautotrophs, use carbon compounds as energy? Chemical compounds