13
The Rice brassinosteroid-deficient dwarf2 Mutant, Defective in the Rice Homolog of Arabidopsis DIMINUTO/DWARF1, Is Rescued by the Endogenously Accumulated Alternative Bioactive Brassinosteroid, Dolichosterone Zhi Hong, a Miyako Ueguchi-Tanaka, a Shozo Fujioka, b Suguru Takatsuto, c Shigeo Yoshida, b Yasuko Hasegawa, a Motoyuki Ashikari, a Hidemi Kitano, a and Makoto Matsuoka a,1 a BioScience and Biotechnology Center, Nagoya University, Chikusa, Nagoya 464-8601, Japan b RIKEN, Institute of Physical and Chemical Research, Wako-shi, Saitama 351-0198, Japan c Department of Chemistry, Joetsu University of Education, Joetsu-shi, Niigata 943-8512, Japan We have identified a rice (Oryza sativa) brassinosteroid (BR)-deficient mutant, BR-deficient dwarf2 (brd2). The brd2 locus contains a single base deletion in the coding region of Dim/dwf1, a homolog of Arabidopsis thaliana DIMINUTO/DWARF1 (DIM/DWF1). Introduction of the wild-type Dim/dwf1 gene into brd2 restored the normal phenotype. Overproduction and repression of Dim/dwf1 resulted in contrasting phenotypes, with repressors mimicking the brd2 phenotype and over- producers having large stature with increased numbers of flowers and seeds. Although brd2 contains low levels of common 6-oxo-type BRs, the severity of the brd2 phenotype is much milder than brd1 mutants and most similar to d2 and d11, which show a semidwarf phenotype at the young seedling stage. Quantitative analysis suggested that in brd2, the 24-methylene BR biosynthesis pathway is activated and the uncommon BR, dolichosterone (DS), is produced. DS enhances the rice lamina joint bending angle, rescues the brd1 dwarf phenotype, and inhibits root elongation, indicating that DS is a bioactive BR in rice. Based on these observations, we discuss an alternative BR biosynthetic pathway that produces DS when Dim/ dwf1 is defective. INTRODUCTION Brassinosteroids (BRs), a class of steroidal plant hormones, are structurally defined as C 27 ,C 28 , and C 29 steroids with substitu- tions on the A- and B-rings and side chains (Fujioka and Sakurai, 1997; Yokota, 1997) and are widely distributed in both lower and higher plants. Since brassinolide (BL), the most biologically active BR, was initially isolated and its structure determined in 1979 (Grove et al., 1979), a variety of BRs have been identified in a broad range of species. To date, >50 BRs have been isolated and identified from the plant kingdom (Bajguz and Tretyn, 2003). A detailed study of the biosynthesis of BL, a C 28 BR, in Catharanthus roseus and Arabidopsis thaliana revealed that two parallel routes, the early and late C-6 oxidation pathways, are connected at multiple steps and are linked to the early C-22 oxidation pathway (Fujioka and Yokota, 2003). In parallel with biochemical studies on BR, molecular genetic approaches using BR-deficient and BR-insensitive mutants of Arabidopsis, pea (Pisum sativum), and tomato (Lycopersicon esculentum) have greatly contributed to our knowledge of the molecular mecha- nisms of BR biosynthesis and signaling (Clouse and Sasse, 1998; Bishop, 2001; Bishop and Koncz, 2002; Fujioka and Yokota, 2003). In contrast with the rapid advances in research on BRs in dicots, little is known on the molecular function of BRs in mono- cots. So far, three types of BR-deficient mutants, d11, d2, and brd1, and one BR-insensitive mutant, d61, have been isolated. Molecular biological studies have demonstrated that the genes containing the d11, d2, and brd1 mutations encode cytochrome P450 enzymes and are involved in the late steps of BR bio- synthesis (Hong et al., 2002, 2003; Tanabe et al., 2005), and the D61 gene encodes a putative protein kinase that is very similar to the Arabidopsis BR receptor BRASSINOSTEROID INSENSI- TIVE1 (BRI1) (Yamamuro et al., 2000). These studies have revealed that the monocot rice (Oryza sativa) plant contains mechanisms for BR biosynthesis and perception that are similar to those in dicots. However, no rice mutation has yet been identified in the biosynthetic pathways of sterols, which are precursors of BRs; consequently, it is not yet known whether the sterol biosynthetic pathway in rice or other monocots is similar to that in dicots. Recently, a maize (Zea mays) gene, dwf1, was cloned, and its high sequence similarity to the Arabidopsis homolog DIMINUTO/ DWARF1 (DIM/DWF1) suggested that monocots and dicots have similar sterol biosynthetic pathways (Tao et al., 2004). However, the absence of a monocot sterol biosynthesis mutant has thus far hampered the understanding of BR and other sterol-based 1 To whom correspondence should be addressed. E-mail makoto@ nuagr1.agr.nagoya-u.ac.jp; fax 81-52-789-5226. The author responsible for distribution of materials integral to the findings presented in this article in accordance with the policy described in the Instructions for Authors (www.plantcell.org) is: Makoto Matsuoka ([email protected]). Article, publication date, and citation information can be found at www.plantcell.org/cgi/doi/10.1105/tpc.105.030973. The Plant Cell, Vol. 17, 2243–2254, August 2005, www.plantcell.org ª 2005 American Society of Plant Biologists

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Page 1: brassinosteroid-deficient dwarf2 Mutant, Defective in the ...The Rice brassinosteroid-deficient dwarf2 Mutant, Defective in the Rice Homolog of Arabidopsis DIMINUTO/DWARF1, Is Rescued

The Rice brassinosteroid-deficient dwarf2Mutant, Defective inthe Rice Homolog of Arabidopsis DIMINUTO/DWARF1, IsRescued by the Endogenously Accumulated AlternativeBioactive Brassinosteroid, Dolichosterone

Zhi Hong,a Miyako Ueguchi-Tanaka,a Shozo Fujioka,b Suguru Takatsuto,c Shigeo Yoshida,b

Yasuko Hasegawa,a Motoyuki Ashikari,a Hidemi Kitano,a and Makoto Matsuokaa,1

a BioScience and Biotechnology Center, Nagoya University, Chikusa, Nagoya 464-8601, Japanb RIKEN, Institute of Physical and Chemical Research, Wako-shi, Saitama 351-0198, Japanc Department of Chemistry, Joetsu University of Education, Joetsu-shi, Niigata 943-8512, Japan

We have identified a rice (Oryza sativa) brassinosteroid (BR)-deficient mutant, BR-deficient dwarf2 (brd2). The brd2 locus

contains a single base deletion in the coding region of Dim/dwf1, a homolog of Arabidopsis thaliana DIMINUTO/DWARF1

(DIM/DWF1). Introduction of the wild-type Dim/dwf1 gene into brd2 restored the normal phenotype. Overproduction and

repression of Dim/dwf1 resulted in contrasting phenotypes, with repressors mimicking the brd2 phenotype and over-

producers having large stature with increased numbers of flowers and seeds. Although brd2 contains low levels of common

6-oxo-type BRs, the severity of the brd2 phenotype is much milder than brd1 mutants and most similar to d2 and d11, which

show a semidwarf phenotype at the young seedling stage. Quantitative analysis suggested that in brd2, the 24-methylene

BR biosynthesis pathway is activated and the uncommon BR, dolichosterone (DS), is produced. DS enhances the rice

lamina joint bending angle, rescues the brd1 dwarf phenotype, and inhibits root elongation, indicating that DS is a bioactive

BR in rice. Based on these observations, we discuss an alternative BR biosynthetic pathway that produces DS when Dim/

dwf1 is defective.

INTRODUCTION

Brassinosteroids (BRs), a class of steroidal plant hormones, are

structurally defined as C27, C28, and C29 steroids with substitu-

tions on the A- and B-rings and side chains (Fujioka and Sakurai,

1997; Yokota, 1997) and are widely distributed in both lower and

higher plants. Since brassinolide (BL), the most biologically

active BR, was initially isolated and its structure determined in

1979 (Grove et al., 1979), a variety of BRs have been identified in

a broad range of species. To date, >50 BRs have been isolated

and identified from the plant kingdom (Bajguz and Tretyn,

2003). A detailed study of the biosynthesis of BL, a C28 BR, in

Catharanthus roseus and Arabidopsis thaliana revealed that two

parallel routes, the early and late C-6 oxidation pathways, are

connected at multiple steps and are linked to the early C-22

oxidation pathway (Fujioka and Yokota, 2003). In parallel with

biochemical studies on BR, molecular genetic approaches using

BR-deficient and BR-insensitive mutants of Arabidopsis, pea

(Pisum sativum), and tomato (Lycopersicon esculentum) have

greatly contributed to our knowledge of the molecular mecha-

nisms of BRbiosynthesis and signaling (Clouse andSasse, 1998;

Bishop, 2001; Bishop and Koncz, 2002; Fujioka and Yokota,

2003).

In contrast with the rapid advances in research on BRs in

dicots, little is known on the molecular function of BRs in mono-

cots. So far, three types of BR-deficient mutants, d11, d2, and

brd1, and one BR-insensitive mutant, d61, have been isolated.

Molecular biological studies have demonstrated that the genes

containing the d11, d2, and brd1mutations encode cytochrome

P450 enzymes and are involved in the late steps of BR bio-

synthesis (Hong et al., 2002, 2003; Tanabe et al., 2005), and the

D61 gene encodes a putative protein kinase that is very similar to

the Arabidopsis BR receptor BRASSINOSTEROID INSENSI-

TIVE1 (BRI1) (Yamamuro et al., 2000). These studies have

revealed that the monocot rice (Oryza sativa) plant contains

mechanisms for BR biosynthesis and perception that are similar

to those in dicots.

However, no rice mutation has yet been identified in the

biosynthetic pathways of sterols, which are precursors of BRs;

consequently, it is not yet known whether the sterol biosynthetic

pathway in rice or other monocots is similar to that in dicots.

Recently, a maize (Zea mays) gene, dwf1, was cloned, and its

high sequence similarity to the Arabidopsis homologDIMINUTO/

DWARF1 (DIM/DWF1) suggested thatmonocots and dicots have

similar sterol biosynthetic pathways (Tao et al., 2004). However,

the absence of a monocot sterol biosynthesis mutant has thus

far hampered the understanding of BR and other sterol-based

1 To whom correspondence should be addressed. E-mail [email protected]; fax 81-52-789-5226.The author responsible for distribution of materials integral to thefindings presented in this article in accordance with the policy describedin the Instructions for Authors (www.plantcell.org) is: Makoto Matsuoka([email protected]).Article, publication date, and citation information can be found atwww.plantcell.org/cgi/doi/10.1105/tpc.105.030973.

The Plant Cell, Vol. 17, 2243–2254, August 2005, www.plantcell.orgª 2005 American Society of Plant Biologists

Page 2: brassinosteroid-deficient dwarf2 Mutant, Defective in the ...The Rice brassinosteroid-deficient dwarf2 Mutant, Defective in the Rice Homolog of Arabidopsis DIMINUTO/DWARF1, Is Rescued

phytohormones in agriculturally important monocot plants. The

sterol mutants of dicots fall into two groups. Members of the first

group contain a lesion in the late steps of the sterol biosynthetic

pathway. The phenotypes of these mutants, such as ste1/bul1/

dwf7 (Choe et al., 1999b; Catterou et al., 2001), le/cro6/dwf5

(Serrano-Cartagena et al., 1999;Choe et al., 2000), anddim/dwf1

(Takahashi et al., 1995; Klahre et al., 1998), cannot be distin-

guished from BR-deficient mutants and can be rescued by

treatment with exogenous BL. By contrast, members of the

second group are defective in the early steps of sterol bio-

synthesis. These mutants, such as cph/smt1 (Diener et al., 2000;

Schrick et al., 2002), cvp1/smt2 (Carland et al., 1999, 2002), and

ell/hyd2/fackel (Jang et al., 2000; Schrick et al., 2000; Souter

et al., 2002), share some of the characteristics of BR-deficient

mutants but also have unique defects during embryogenesis that

cannot be rescued by BR treatment. If rice sterol biosynthesis is

similar to that of dicots and rice sterols have biological functions

similar to dicot sterols, it should be possible to isolate mutants

defective in sterol biosynthesis from rice mutant stocks by

screening for BR-related phenotypes.

Here, we report the isolation and characterization of a rice BR-

deficient mutant, BR-deficient dwarf2 (brd2). Molecular genetic

studies have revealed that brd2 is a loss-of-function allele ofDim/

dwf1, a gene homologous to the Arabidopsis DIM/DWF1. Al-

though the level of common endogenous BRs is severely re-

duced in brd2, the abnormalities of the mutant are less severe in

the early vegetative stage. Feeding experiments and quantitative

analysis of sterols and BR intermediates have revealed that the

brd2 mutant accumulates an active BR, dolichosterone (DS),

which is not detected in the wild type. Our data suggest that the

weak phenotype of brd2 is caused by the production of DS in

a Dim/dwf1-free BR biosynthetic pathway.

RESULTS

Characterization of brd2

Since the identification of the first rice BR-related mutant, d61,

which is defective in the rice Bri1 gene (Yamamuro et al., 2000),

we have collected rice dwarf mutants with phenotypes similar to

d61 to investigate the mechanisms of BR biosynthesis and

signaling in rice.We have also previously isolated three other BR-

related mutants, brd1, d2, and d11, all of which are defective in

BR biosynthesis owing to mutations in BR C-6 oxidase (Cyp85),

Cyp90D2, and Cyp724B1, respectively (Hong et al., 2002, 2003;

Tanabe et al. 2005). Recently, we identified a dwarf mutant, brd2,

which displays the typical BR-deficient phenotype but also has

characteristics not observed in the other mutants. Figure 1A

shows the gross morphology of the mutant in an early vegetative

stage. At this stage, the mutant plant (right) displays a moderate

dwarf phenotype with a height;70% of the wild-type plant (left)

but no other obvious abnormalities. However, as development

progresses, the phenotype becomes more severe with charac-

teristics typical of BR-related mutants: dark-green, erect leaves

and shortened leaf sheaths. After flowering, the height of the

plant reaches only;40% of the wild type (Figure 1B). We com-

pared the internode elongation patterns of brd2, the wild type,

and other BR-deficient mutants (Figure 1C). In the wild type, the

five uppermost internodes elongate; the internodes are num-

bered from top to bottom such that the uppermost, just below

the panicle, is designated as the first internode (Figure 1C).

By contrast, the three BR-deficient mutants show different

Figure 1. Phenotype of the brd2 Mutant.

(A) Gross morphology of wild-type (left) and brd2 (right) seedlings grown

for 40 d in soil. Bar ¼ 10 cm.

(B)Gross morphology of field-grown wild type (left) and brd2 (right) at the

flowering stage. Bar ¼ 15 cm.

(C) Comparison of the internode elongation pattern of brd2 with pre-

viously characterized rice BR-deficient mutants. The five uppermost

internodes (I to V) of the wild type were elongated. Bar ¼ 10 cm.

(D) Panicle structure. Thewild-type plant (left) developed;120 seeds per

panicle, and thebrd2mutant panicle developed;30 seedswith poor ger-

mination rates. Arrows indicate the positions of the nodes. Bar ¼ 10 cm.

(E) Morphology of unhulled grains (top) and brown rice (bottom). The

mutant (right) produced shortened grains. Bar ¼ 1 cm.

(F) Root morphology. Seedlings were grown at 308C in water for 1 week

in the light. Bar ¼ 1 cm.

2244 The Plant Cell

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elongation patterns: d2-1 has a specific inhibition in the second

internode, brd1-1 is completely defective in internode elonga-

tion, and the first internode of brd2 elongates, but the lower

internodes do not (Figure 1C).d61-2, which is defective in the rice

Bri1 gene, also exhibits dwarfism with a lack of internode

elongation except for the first internode (Yamamuro et al.,

2000). The brd2 mutant flowers and produces malformed pani-

cles, but the numbers of spikelets and rachis branches, aswell as

fertility, are severely reduced (Figure 1D). The lengths of the first

and second rachis branches in the panicle are also severely

reduced. In contrast with these severe defects, the neck in-

ternode of the mutant is longer than that of the wild type (Figure

1D). This phenomenon is a common feature in rice BR-related

mutants because long neck internodes are also observed in d2

and d61-1. In addition, the brd2 mutant also exhibits shortened

grains (Figure 1E) and defective root elongation and develop-

ment (Figure 1F). Although one seminal root develops normally

during embryogenesis, after germination the seminal root elon-

gates to only two-thirds of the wild-type root and formation of

the crown root is inhibited, but lateral root formation is not as

severely affected as crown root formation.

brd2 Is a Knockout Allele of the Dim/dwf1Gene

To isolate Brd2 by positional cloning, we first performed rough

mapping of brd2 using 30 F2 progeny with the dwarf phenotype.

Using 62 molecular markers, the brd2 locus was mapped to rice

chromosome 10 between 21.8 and 30.2 centimorgan. Because

a gene homologous to Arabidopsis DIM1/DWF1 is present in this

area,we suspected thatbrd2was identical toDim/dwf1 (Figure 2A).

The predicted Dim/dwf1 protein consists of 561 amino acids with

80% identity to the Arabidopsis DIM/DWF1 sequence, and com-

parison of the genomic and full-length cDNA sequences showed

that Dim/dwf1 contains three predicted exons (Figure 2B). Direct

Figure 2. Molecular Characterization of the brd2 Mutation.

(A) The brd2 mutation was mapped at ;25 centimorgan on chromosome 10, near the map position of Dim/dwf1.

(B) Schematic diagram of the structure of Dim/dwf1 and the site of the mutation in the brd2 allele. Closed boxes represent exons, and open boxes

indicate introns. The first Met (ATG) and the stop codon (TAA) are located in exons 2 and 3, respectively. The single base deletion in the brd2 allele is

indicated by an arrow, and the premature stop codon is marked with an asterisk.

(C) The deduced amino acid sequence of Dim/dwf1. The mutation site is marked with a closed triangle, and the FAD binding domain is underlined.

(D) Levels ofDim/dwf1 transcripts in wild-type (left) and brd2 (right) plants. Ten micrograms of total RNAwas loaded per lane. Ethidium bromide–stained

rRNA bands were monitored as a loading control.

(E) Molecular complementation. Transgenic plants derived from mutant callus transformed with the Dim/dwf1 gene had the wild-type phenotype, in

contrast with the dwarf phenotype of the mutant (right), and transformants containing the empty vector had the dwarf phenotype (left).

(F) Organ-specific expression of the Dim/dwf1 gene in the wild type. RT, root; SA, shoot apex; LB, leaf blade; LS, leaf sheath; ST, stem; PA, panicle; FL,

flower. Five micrograms of total RNA was loaded per lane, and ethidium bromide–stained rRNA bands were monitored as a loading control.

(G) The effect of BL on Dim/dwf1 expression. Total RNA was isolated from wild-type, brd1-1, and d61-2 seedlings either treated for 10 d with a final

concentration of 1 mM BL (þ) or untreated (�); 7.5 mg was loaded per lane.

An Uncommon BR Biosynthetic Pathway 2245

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sequencingof thebrd2mutant allele revealeda singlebasedeletion

(guanine) in exon 2, which leads to a frameshift and produces

a premature stop codon near the mutation site (Figure 2B). The

mutationcauses the lossof themajority of aconservedFADbinding

domain and the C-terminal region in Dim/dwf1 (Figure 2C).

We used gel blot analysis to examine the level of Dim/dwf1

transcripts in the mutant. RNA from 10-d-old light-grown wild-

type and mutant seedlings was isolated and probed with the

;800-bp 39 fragment of the Dim/dwf1 cDNA. The Dim/dwf1

transcript was detected in wild-type seedlings but not in the

mutant (Figure 2D). A wild-type genomic DNA fragment contain-

ing the entire Dim/dwf1 was transformed into brd2, which re-

stored the wild-type phenotype in all plants that were resistant to

the selection marker, hygromycin (Figure 2E, right). Transforma-

tion with the empty vector had no effect on the dwarf phenotype

(Figure 2E, left). Based on these results, we predict that brd2 is

a knockout allele of Dim/dwf1.

The Dim/dwf1 expression pattern in various organs was

studied using RNA gel blot analysis. Dim/dwf1 transcripts were

detected in all organs examined, albeit at different levels. The

highest expression was in stems; intermediate expression was

seen in roots, the shoot apex, and flowers; and expression

was low in leaves and panicles (Figure 2F). RNA gel blot analysis

was also used to examine the effect of exogenously applied BL

on Dim/dwf1 expression (Figure 2G). Similar Dim/dwf1 expres-

sion levels were observed in the wild type, the BR-deficient

mutant brd1, and d61-2, which is partially defective in the BR

signaling pathway (Yamamuro et al., 2000), and expression was

not affected by treatment with BL. These results indicate that

Dim/dwf1 expression is not regulated by BL, in contrast with D2

andBRD1, which are downregulated byBL in a feedbackmanner

(Hong et al., 2002, 2003).

Overexpression and Suppression of Dim/dwf1

in Transgenic Rice Plants

Because only one brd2mutant was isolated in the first screening,

we attempted to isolate other brd2 alleles fromourmutant stocks

and the rice Tos17 insertion mutant library, but no other alleles

were found in these libraries. Therefore, we produced transgenic

plants expressing antisense and sense Dim/dwf1 transcripts

under the control of the rice Actin constitutive promoter (McElroy

et al., 1990). Antisense and sense Dim/dwf1 transgenic plants

showed contrasting phenotypes in plant height (dwarf versus tall)

(Figure 3A), lamina joint bending (erect versus bent) (Figure 3B),

the panicle (decreased versus increased spikelets) (Figure

3C), and internode elongation (stunted versus elongated) (Figure

3D), respectively. The overall phenotype of antisense plants was

similar tobrd2, although the abnormalities of the antisense plants

were less severe than in brd2. The gross morphologies of the

transformant lines confirm that the brd2 phenotype is caused by

a defect in the functioning of Dim/dwf1. We performed RNA gel

blot analysis using two different probes to confirm changes in the

levels of Dim/dwf1 mRNA in the transgenic plants (Figure 3E).

When the entire cDNA sequence was used as a probe, the inten-

sity of the hybridized band in both antisense and sense plants

was greater than in wild-type plants, indicating that the antisense

and sense RNAs are highly expressed in the transgenic lines.

Figure 3. Phenotypes of Dim/dwf1 Antisense and Sense Transgenic Plants.

(A) Gross morphology of an antisense plant (left), a control plant

containing the empty vector (middle), and a sense plant (right) 3 months

after transplantation. Bar ¼ 20 cm.

(B) Leaf morphology: a wild-type leaf (center) bends away from the

vertical axis of the leaf toward the abaxial side, an antisense leaf (left) is

more erect, and that of an overproducer (right) is more bent.

(C) Panicle structure: the antisense plant (left) generates poor panicles

with lower spikelet numbers than the wild type (center), whereas the

overproducer (right) generates superior panicles with increased spikelet

numbers.

(D) Internode elongation pattern. The antisense plant (left) is severely

inhibited in the elongation of internodes II through V, whereas the

overproducer has increased numbers and lengths of elongated intern-

odes in comparison with the wild type (center). Bar ¼ 20 cm.

(E) RNA gel blot analysis of the endogenous and transformed Dim/

dwf1 transcripts. Two micrograms of total RNA was loaded per lane. An

800-bp cDNA fragment containing the coding sequence was used as

a probe to detect both sense and antisense Dim/dwf1 transcripts (top),

and a 200-bp probe containing only the 39-noncoding sequence of the

Dim/dwf1 transcript was used to detect endogenous Dim/dwf1 expres-

sion (middle). Ethidium bromide–stained rRNA bands were monitored as

a loading control (bottom).

2246 The Plant Cell

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When the 39-untranslated sequence, which was not included in

the transgene in the antisense or sense constructs, was used as

a probe, either no band or a band of very low intensity was

observed in the antisense plant samples, and a strong band of an

intensity similar to the wild type was observed in the sense plant

samples (Figure 3E). The RNA gel blot analysis confirms that the

phenotypes observed in the antisense and sense plants are

caused by lower and higher expression ofDim/dwf1, respectively.

Common BR Levels Are Much Lower in brd2 Than in

d2 or d11, but the Dwarfism of brd2 Is Most Similar

to That of d2 and d11

We compared the levels of BR intermediates in brd2 and wild-

type seedlings to identify themetabolic step that is blocked in BR

biosynthesis. As shown in Figure 4, intermediates from cam-

pesterol (CR) to castasterone (CS), in either the early or late C-6

oxidation pathways, were dramatically decreased in the brd2

mutant. No BL was detected in the shoots of either mutant or

wild-type plants. The precursor of BL, CS, which is predicted to

be the most bioactive BR in rice because BL has not yet been

detected in this species (Yamamuro et al., 2000; Hong et al.,

2002, 2003), was detected in the wild type, whereas no or a very

low level of CS was detected in brd2 in the two independent

experiments, confirming that the mutant is deficient in the

biosynthesis of the active BR. Because Arabidopsis DIM/DWF1

has been proposed to catalyze the conversion of 24-methylene-

cholesterol (24-MC) to CR (Klahre et al., 1998), we also mea-

sured the levels of 24-MC and CR in wild-type and brd2 plants.

In the mutant, the level of CR was decreased >100-fold, and

the level of 24-MC was increased >10-fold relative to the wild

type, demonstrating that rice Dim/dwf1 catalyzes the conversion

of 24-MC to CR, as does Arabidopsis DIM/DWF1.

Although the Arabidopsis and rice DIM/DWF1 proteins cata-

lyze the same step in the BRbiosynthetic pathway, the severity of

the knockout mutants of these genes differs, with the Arabidop-

sis DIM/DWF1 knockout mutant showing a severely abnormal

phenotype (Takahashi et al., 1995) and the rice Dim/dwf1

Figure 4. Quantitative Analysis of Endogenous BR Intermediates in Wild-Type and brd2 Plants.

Shoots of wild-type and mutant plants were harvested after growth in a greenhouse for 2 months. BR levels (ng/g FW) in wild-type (left) and brd2 (right)

plants are shown below each product. BR levels were measured in two independent experiments. na, not analyzed; nd, not detected.

An Uncommon BR Biosynthetic Pathway 2247

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knockout mutant showing a moderate phenotype at an early

vegetative stage (Figure 1A). Genomic DNA gel blot analysis was

performed to examine the possibility that the rice genome

contains an additional Dim/dwf1 homolog. Even under low-

stringency conditions, only bands derived from Dim/dwf1 itself

hybridized with the Dim/dwf1 cDNA probe. In addition, no

homolog of Dim/dwf1 in the rice genome was identified in

a tBLAST search for proteins with similarities to Arabidopsis

DIM/DWF1 and rice Dim/dwf1 (data not shown).

To reconcile the inconsistency between the phenotype and the

level of the active BR, CS, in brd2, we also compared the levels of

BR intermediates and the phenotypic severity of the rice BR-

deficientmutants previously isolated (Figure 5).Mutants showing

a mild phenotype, such as d2-1, d2-2, d11-1, and d11-2,

contained some CS (0.10 to 0.38 ng/g fresh weight [FW]),

6-deoxocastasterone (6-DeoxoCS) (0.54 to 1.27 ng/g FW), and

typhasterol (TY) (0.40 to 0.64 ng/g FW),which corresponded from

aquarter to a similar level as in thewild type. By contrast,mutants

showing severe phenotype, such as brd1-1, brd1-2, and brd1-3,

contained undetectable levels of CS and 0.04 to 0.18 ng/g FW of

TY, whereas the level of 6-DeoxoCSwasmuch higher than in the

wild type because thesemutants are defective in BRC6-oxidase.

When we compared brd2 with these BR-deficient mutants, the

dwarfism of brd2 was most similar to d2-1 and d11-2, whereas

the amounts of three BRs were 0.01 or undetectable (Figure 5).

An Alternative BR Biosynthetic Pathway Produces an

Uncommon Bioactive BR in Rice

The trace levels of CS in the brd2 mutant, which shows a

moderately abnormal phenotype, suggest that an alternative

BR biosynthetic pathway may function in the mutant and may

produce one ormore alternative bioactive BRs that attenuate the

severity of the phenotype. Figure 6 shows the proposed normal

and alternate BR biosynthesis pathways. The bioactive CS is

synthesized via a Dim/dwf1-requiring pathway with the conver-

sion of 24-MC to CR, as mentioned above. Measurements of the

levels of all BR-related compounds in these pathways showed

that Dim/dwf1 was also necessary for the isomerization and

reduction of the D24(28) bond of isofucosterol to produce sitos-

terol. Three alternative pathways are expected to be activated

when D24(28) isomerization and reduction are defective: the 28-

nor–type pathway with 28-norcastasterone as the end product,

the 24-methylene–type pathway with DS as the end product,

and the 24-ethylidene–type pathway with 28-homodolichoster-

one as the end product (Figure 6). The first possibility, the

28-nor–type pathway, is less likely because in brd2, the level of

a key precursor, cholesterol, was less than the level in the wild

type, and the end product of this pathway, 28-norcastasterone,

was undetectable. The 24-ethylidene–type pathway, the last

possibility, was found to be activated in brd2, and the levels of

intermediates in this pathway, such as isofucosterol, 24-ethyl-

idenecholest-4-en-3-one, and 24-ethylidenecholestanol, were

greatly increased, but the expected end product, 28-homodo-

lichosterone, could not be detected. Thus, it is difficult to

conclude that the 24-ethylidene–type pathway contributes to

the production of an alternative bioactive BR in the mutant.

The most likely pathway for the production of an alternative

bioactive BR is the 24-methylene–type pathway. The levels of

intermediates in this pathway were strongly increased in brd2,

and the end product of this pathway, DS, which was previously

reported to be present in rice (Abe et al., 1984), also accumulated

in the mutant but was undetectable in the wild type. Because we

did not have an internal standard for DS, we could not estimate

its intrinsic level. The endogenous amount of DS should be higher

than the raw value, which is presented as the amount of DS in

Figure 6. If the recovery rate of DS is the same as that of

BL (55%), the expected level of DS in brd2 is estimated to be

;0.20 ng/g FW,which is approximately half of the CS (;0.40 ng/g

FW) found in the wild type.

DS Has Biological Activity Similar to CS in Rice

To examine the possibility that the bioactivity of DS compensates

for decreased levels of CS in the brd2 mutant, DS feeding

Figure 5. Comparison of Dwarfism and Level of BRs between brd2 and

Other Rice BR-Deficient Mutants.

(A) Two-week-old seedlings are shown. The mutants were germinated

and grown in MS agar. The background of d2-1, d2-2, and d11-1 is T65

(Taichung 65); brd2, brd1-1, brd1-2, and brd1-3 are Ni (Nipponbare)

background; and that of d11-2 is Shi (Shiokari). Bar ¼ 5 cm.

(B) Comparison of the level of TY, 6-DeoxoCS, and CS in the BR-

deficient mutants. The background plant of each mutant is written in

parentheses. The level of BRs in d2, d11, brd1-1, and brd1-2 are adopted

from the results previously reported (Hong et al., 2002, 2003; Tanabe

et al., 2005). CS level in brd1-3 was not determined because of

contamination with unknown compound(s).

2248 The Plant Cell

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Figure 6. The Sterol Biosynthetic Pathway and Sterol Contents in the Wild Type and brd2.

An Uncommon BR Biosynthetic Pathway 2249

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experiments were performed using wild-type and BR-related

mutants. We first compared the effects of DS and CS on the

growth of brd1-1, a knockout mutant of BR C-6 oxidase. CS was

found to promote the elongation of leaf sheaths and to rescue the

abnormal morphology of newly expanded leaves after a 2-week

exposure. Mutant plants treated with DS also grew elongated

leaf sheaths, though the effect of DSwas somewhat weaker than

that of CS. Similarly, the morphology of newly expanded leaves

was rescued by treatment with DS (Figure 7A).

Lamina joint bending tests were also performed using wild-

type, brd2, and d61-2 leaves (Figure 7B). This assay exploits the

high sensitivity of the degree of bending between the rice leaf

sheath and blade to exogenously applied bioactive BRs. In the

wild type, both CS and DS increased lamina joint bending in

a dose-dependent manner, with CS being slightly more active

than DS. DS was more effective than CS at increasing the

bending of the lamina joints in the brd2mutant. In d61-2, a loss-

of-function mutant of the BRI1 receptor kinase, neither CS nor

DS increased lamina joint bending, indicating that DS and CS are

similarly perceived by the BRI1 receptor.

The effects of CS and DS on root elongation in wild-type, brd2,

and d61-2 seedlings were also examined (Figures 7C and 7D).

Treatment of wild-type plants with 10�7 M CS or DS severely

inhibited root elongation, although the inhibitory effect of DS was

slightly weaker than that of CS (Figure 7C). Both compounds also

inhibited root elongation in brd2. By contrast, the elongation of

d61-2 roots was not inhibited by CS or DS. The inhibition of wild-

type root elongation by CS and DS was dose dependent from

10�9 to 10�7 M, and the inhibitory activity of CS was always

higher thanDSat$10�9M. Inbrd2, CS andDSalso inhibited root

elongation in a dose-dependentmanner from10�9 to 10�6M, but

the inhibitory effects were similar at the same concentrations.

However, neither CS nor DS inhibited root elongation in the BR-

insensitive mutant at concentrations of 10�7 M or lower, whereas

both compounds slightly inhibited root elongation at 10�6M,with

CS having a slightly stronger effect than DS. These results

support the observation in the lamina joint bending test that DS is

a bioactive BR with slightly less activity than CS in the wild type,

but in brd2, DS is as bioactive as CS.

DISCUSSION

This study demonstrates that a knockout mutation, brd2, of the

rice gene encoding a protein similar to the Arabidopsis DIM/

DWF1 causes a semidwarf phenotype in the vegetative stage,

with severe defects in internode elongation and panicle and seed

development. Quantitative analysis of the endogenous sterol

levels showed that brd2 is defective in the conversion of 24-MC

to CR, as are the Arabidopsis dim/dwf1 and pea lkb mutants

(Nomura et al., 1999; Schultz et al., 2001). The weak phenotype

of brd2 during vegetative growth cannot be explained by the

residual levels of CS but is probably due to DS produced in the

absence of adequate BRs from other pathways. DS has BR

activity in rice plants, such as promoting the angle of bending of

the lamina joint and inhibiting root elongation.

brd2 Exhibits Features Not Observed in Previously

Isolated Rice BR-Related Mutants

Rice BR-related mutants can be distinguished from other rice

dwarf mutants by their distinctive internode elongation features

(Figure 1C). The group of BR-related mutants that includes the

mutants d2, d11, and d61-1 hadweak phenotypes and a specific

reduction in the second internode. Mutants brd2 and d61-2, with

intermediate phenotypes, had a specific reduction from the

second to the fourth internodes. Mutants with severe pheno-

types, brd1-1 and brd1-2, only elongated at the neck internode.

The overall severity of rice BR-related mutants can be repre-

sented by these unique internode elongation patterns. For ex-

ample, the mutants of the d2, d11, and d61-1 group show mild

dwarfism of leaves in the vegetative stage and slightly shortened

yet fertile grains. By contrast, the mutants of the brd1-1 and

brd1-2 group form severely stunted and malformed leaves at

the vegetative stage and very small numbers of flowers, which

are malformed and infertile. However, the overall phenotype of

brd2 does not match either group, although this mutant has a

specific reduction in the second to fourth internodes. For ex-

ample, brd2 has mildly dwarfed leaves but no other abnormal

morphologies. The phenotype is similar to that of thed2,d11, and

d61-1 group, all of which form erect leaves with slightly stunted

sheaths. In contrast with its mild phenotype in the early seedling

stage, brd2 is much more severely affected at the developing

flower stage than the d61-2 group, approaching that of brd1-1

and brd1-2. The fertility of brd2 is low, as it is difficult to obtain

seeds from plants homozygous for brd2, but d61-2 forms fertile

flowers and develops viable seeds. Therefore, the phenotype of

brd2 is intermediate between mild and severe as growth pro-

gresses, a feature that is unique tobrd2. It is possible that the brd2

phenotype is caused by an unusual mechanism related to BR

biosynthesis.

The brd2Mutation Is a Knockout of Rice Dim/dwf1

We concluded that the brd2 mutation is caused by a knockout

of Dim/dwf1 for several reasons. First, Dim/dwf1 in brd2 con-

tains a single base deletion in exon 2, which leads to a premature

stop codon approximately two-thirds of the way through the

coding region, causing the production of a nonfunctional protein

(Figure 2B). Second, theDim/dwf1 transcript is not detected in the

mutantbut is in thewild type (Figure 2D). Third, transformationwith

Figure 6. (continued).

Proposed biosynthetic pathways of the wild type (left) and brd2 (right) are shown. The end products of theDim/dwf1-requiring pathways are enclosed in

boxes with solid lines, and those of the Dim/dwf1-free pathway are enclosed in boxes with dashed lines. Sterol levels were measured by two

independent experiments. The level of DS was not corrected by an internal standard. The number of arrows does not represent the number of chemical

reaction steps. nd, not detected.

2250 The Plant Cell

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wild-typeDim/dwf1 rescues themutant phenotype ofbrd2 (Figure

2E). Fourth, the phenotype of plants transformed with the anti-

sense cDNA mimics the abnormal phenotype of brd2 (Figure 3).

Finally, in the mutant, the level of 24-MC is greater than in the wild

type, whereas the level of CR is dramatically decreased (Figure 4),

as in the Arabidopsis dimmutant and the pea lkbmutant.

Klahre et al. (1998) studied the function of Arabidopsis DIM/

DWF1 by analyzing the dim mutant, revealing that dim accumu-

lates 24-MC and shows a deficiency in CR. Using deuterium-

labeled sterols, the authors also showed that DIM/DWF1 is

involved in both the isomerization and reduction of the D24(28)

bond. A similar accumulation of 24-MC and deficiency in CRwas

observed in the Arabidopsis dwf1 mutant, which is allelic to dim

(Choe et al., 1999a), and also in the pea lkbmutant (Nomura et al.,

1999). Taking all of these observations together, although there is

no direct biochemical evidence that the DIM/DWF1 protein

Figure 7. BR Biological Activity of DS.

(A) Phenotypic rescue of the abnormal morphology of brd1-1 by treatment with DS and CS. The malformed phenotype and shortened leaf sheaths of

a brd1-1 plant grown for 4 weeks were not rescued by the mock treatment (cont.), whereas 1 mM DS or CS restored the sheath elongation and

morphology of newly expanded leaves. White brackets indicate the relative length of the uppermost leaf sheaths.

(B) Lamina joint bending test. DS increased the lamina joint bending of the wild type and brd2 in a dose-responsive manner but not of the BR-perception

mutant d61-2. CS treatment had an effect similar to DS treatment, although the efficiency of CS was slightly higher than that of DS in the wild type and

lower in brd2. Shown at right are typical lamina joint bending results after treatment with 1 mg CS or DS.

(C) Inhibition of root elongation by treatment with DS or CS. Plants were germinated on agar lacking (�BR) or containing 10�7 M CS or DS. Seedlings

were examined 4 d after germination.

(D) Effect of CS and DS on root elongation in wild-type, brd2, and d61-2 seedlings. The plants were germinated as in (A) with the indicated

concentrations of CS or DS. The data presented are the means of results from six plants. Error bars ¼ SD.

An Uncommon BR Biosynthetic Pathway 2251

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catalyzes the isomerization and reduction of the D24(28) bond, it is

possible that the Arabidopsis and pea DIM/DWF1 proteins

catalyze the conversion of 24-MC to CR in the synthesis of

bioactive BRs in these plants. By analogy, rice Dim/dwf1 should

also be involved in the isomerization and reduction of the D24(28)

bond to convert 24-MC to CR in rice (Figure 4).

DS Functions as a Bioactive BR in Rice

There are three possible hypothetical pathways for sterol me-

tabolism in brd2, in which the isomerization and reduction of the

D24(28) bond are impaired: the 28-nor–type, the 24-methylene–

type, and the 24-ethylidene–type pathways (Figure 6). Nomura

et al. (1999) previously discussed the possibility that plants

defective in DIM/DWF1 may not show a clear dwarf phenotype

because they can synthesize C27-type BRs, probably from

cholesterol, which would compensate for decreases in CR-

derived BRs, such as BL and CS. This postulated pathway,

derived from cholesterol, is the same as the first hypothesized

pathway but is not functional in the brd2 mutant. Actually, the

level of cholesterol is decreased, not increased, in the mutant. In

contrast with the 28-nor–type pathway, the 24-methylene– and

24-ethylidene–type pathways are activated in the mutant, and

the levels of 24-methylene–type and 24-ethylidene–type sterols

are greatly increased (Figure 6). Similarly, the Arabidopsis dim/

dwf1 and pea lkbmutants accumulate relatively large amounts of

24-MC and isofucosterol (Klahre et al., 1998; Nomura et al.,

1999), indicating that sterol metabolism of the 24-methylene and

24-ethylidene types is activated in various plant species that are

defective in isomerization and reduction of the D24(28) bond.

Klahre et al. (1998) proposed the activation of a 24-methylene–

type pathway, which converts 24-MC to 24-methylenecholesta-

nol, in the Arabidopsis dim mutant by analogy with the pathway

from CR to campestanol. Evidence in brd2 suggests that the rice

BR-metabolizing enzymes also catalyze the steps from24-MC to

DS. By analogy, it is possible that the enzymes in other plants

also catalyze the steps from 24-MC to DS to accumulate DS in

dim/dwf1 mutants of other plant species. Further analysis of the

sterol content in dim/dwf1 mutants should help to elucidate this

hypothesis.

The high levels of sterols, such as 24-methylenecholestanol

and 24-ethylidenecholestanol, in the brd2 mutant suggest that

BRs containing 24-methylene and 24-ethylidene groups also

accumulate in themutant. This was found to be true in the case of

the 24-methylene–type BR, and the level of DS was increased

in themutant, whereas 28-homodolichosterone, the end product

of the 24-ethylidene BR pathway, was not detected. The lack of

production of 28-homodolichosterone in the mutant may be

caused by a low or complete lack of affinity of BR-metabolizing

enzymes for 24-ethylidene–type BRs because no 28-homocas-

tasterone was detected in wild-type plants, even though high

levels of its precursor, sitostanol, were detected (Figure 6).

The biological activity of DS in rice was confirmed by feeding

experiments using three different BR-responding phenomena in

rice: the rescue of leaf sheath elongation in a BR-deficient

mutant, an increase in the lamina bending angle, and the in-

hibition of root elongation (Figure 7). In each of these experi-

ments, the wild type was more sensitive to CS than to DS,

indicating that CS has a higher specific BR activity than DS.

DS and CS had approximately equal activity in the root inhibi-

tion assays in both the wild type and the brd2 mutant, but

brd2 was more sensitive to DS than to CS in lamina bending

assays. These results suggest a difference in tissue-specific BR

sensing.

It is noteworthy that in d61-2, which contains a lesion in rice

Bri1 kinase, BR-responsive events are not enhanced by treat-

ment with either DS or CS. This observation demonstrates that

Bri1 kinase is essential for perception of the signals triggered by

DS andCS; consequently, the signaling pathway triggered byDS

should be the same as that triggered by CS after perception by

the Bri1 kinase. At present, the reason for the higher sensitivity of

the brd2mutant to DS than to CS in the lamina bending assay is

unclear. Because lamina joint bending is a unique and hyper-

sensitive phenomenon in BR-triggering events, higher sensitivity

to DS does not directly suggest that the brd2mutant always has

higher sensitivity to DS in other tissues or organs. For example,

the root inhibition assay showed that there is no difference in the

sensitivity between DS and CS in brd2 (Figure 7C). This also

suggests the possibility that lamina joint bending of rice may be

regulated by a unique mechanism triggered by BR. In fact, its

bending is regulated not only by BR but also by auxin in

a synergistic manner (Takeno and Pharis, 1982; Cao and Chen,

1995).

METHODS

Plant Materials and Growth Conditions

The brd2mutant was obtained from rice (Oryza sativa) plants regenerated

froma suspension cell culture derived froma japonica strain,Nipponbare.

The plants were grown to maturity in the research field, and transgenic

plants were grown in a greenhouse under 16 h of illumination at 288C. For

germination, seeds were surface sterilized as described previously (Hong

et al., 2003) and plated on MS medium containing 0.8% agar. The plates

were then incubated at 308C under continuous light.

Isolation, Sequencing, and Mapping of the brd2 Gene

The Dim/dwf1 gene was identified in a BLAST search of all available rice

genomic databases. The corresponding cDNA sequence was entered as

CA757254 and AU030326, which contain the 59- and 39-flanking regions,

respectively. To identify the site of the mutation in the brd2 gene, we

amplified Dim/dwf1 by PCR and sequenced the amplified DNA fragment

with appropriate primers and without cloning. The full-length cDNA clone

was produced by RT-PCR using 1 mg of total RNA and the Omniscript RT

kit (Qiagen, Hilden, Germany). The isolated cDNA was sequenced to

confirm that no nucleotide substitutions occurred during the PCR. A clone

with the correct sequence was used to prepare probes and the sense and

antisense constructs. To map the brd2 mutant, F2 populations derived

from a cross between a plant heterozygous for brd2 and an indica strain,

kasalath, were used. Thirty plants homozygous for brd2 were identified

using molecular markers.

RNA Isolation and RNA Gel Blot Analysis

Total RNA was isolated using the RNeasy plant mini kit (Qiagen). After

incubation at 658C for 5 min, the total RNA was subjected to electropho-

resis on a 1% denaturing gel and then transferred to a Hybond Nþ

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membrane for RNA gel blot analysis. The probe used was a 39-terminal

cDNA fragment unless specified otherwise in the figure legends, and the

subsequent hybridization and washing were performed using the con-

ditions described by Ueguchi-Tanaka et al. (2000).

Complementation and Antisense Analyses

To isolate a genomic Dim/dwf1 clone, a BAC library was screened using

PCR. The XBH43-2B02 clone was identified as containing the entire Dim/

dwf1 gene. An 8.8-kb EcoRI fragment encompassing the full-length

Dim/dwf1 sequence and the promoter domain were fused in the SmaI

site of the hygromycin-resistant binary vector pBI-Hm12, which was

kindly provided by Hiroyuki Hirano (Tokyo University, Tokyo, Japan). The

construct was introduced into brd2 cells by Agrobacterium tumefaciens–

mediated transformation as described by Hiei et al. (1994). Control plants

were transformed with the empty vector.

To produce antisense and overexpression constructs, the full-length

cDNA was fused downstream of the rice Actin promoter in the pAct-Nos/

Hm2 vector. The orientation of the cDNA clone was determined by

restriction enzyme digestion.

Quantification of Sterols and BRs

Shoots of wild-type and mutant plants were harvested after growth in

a greenhouse for 2 months and lyophilized immediately at �808C.

Extraction and purification for BRs and sterols were performed according

to the method described by Fujioka et al. (2002) and He et al. (2003).

For BR analysis, plants (20 g FW equivalent) were extracted. [2H6]

Brassinolide, [2H6]castasterone, [2H6]typhasterol, [2H6]teasterone,

[2H6]cathasterone, [2H6]6-deoxocastasterone, [2H6]6-deoxotyphasterol,

[2H6]3-dehydro-6-deoxoteasterone, and [2H6]6-deoxoteasterone (each

1 ng/g FW) were added to the extract as internal standards. For the

analysis of 6-deoxocathasterone and sterols, plants (0.5 g FW equivalent)

were used. [2H6]episterol (100 ng), [2H7]24-methylenecholesterol (2.5mg),

[2H7]24-methylenecholest-4-en-3-one (500 ng), [2H7]24-methylene-

5a-cholestan-3-one (500 ng), [2H7]24-methylenecholestanol (500 ng),

[2H6]campesterol (10 mg), [2H6](24R)-24-methylcholest-4-en-3-one (500

ng), [2H6](24R)-24-methyl-5a-cholestan-3-one (50 ng), [2H6]campestanol

(250 ng), [2H6]6-oxocampestanol (25 ng), [2H3]cholesterol (2.5 mg), and

[2H6]6-deoxocathasterone (2.5 ng) were added to the extract as internal

standards. Purified fractions were derivatized and analyzed by gas

chromatography–mass spectrometry (GC-MS). BRs and sterols were

identified by full-scan GC-MS. The endogenous levels of episterol,

24-MC, 24-methylenecholest-4-en-3-one, 24-methylene-5a-cholestan-

3-one, 24-methylenecholestanol, CR, (24R)-24-methylcholest-4-en-3-

one, (24R)-24-methyl-5a-cholestan-3-one, campestanol, cholesterol,

and 6-oxocampestanol were calculated from the peak area ratios of

molecular ions of the internal standard and the endogenous sterol. The

endogenous level of 6-deoxocathasterone was calculated from the peak

area mass-to-charge (m/z) ratios of 193 for the internal standard andm/z

187 for the endogenous one. The endogenous levels of C29 sterols were

roughly estimated from the peak area ratios of molecular ions of internal

standards of the corresponding C28 sterols and the endogenous ones.

For instance, the level of (24R)-24-ethylcholest-4-en-3-one was calcu-

lated from the peak area ratios ofmolecular ions ofm/z 404 for [2H6](24R)-

24-methylcholest-4-en-3-one (C28 sterol, internal standard) and m/z 412

for (24R)-24-ethylcholest-4-en-3-one.

For purification and semiquantitative analysis of DS, we purified DS

according to themethod described byHe et al. (2003). Using thismethod,

the chromatographic behavior of DS was the same as BL. Purified HPLC

fraction (BL fraction: retention time, 8 to 10min) was subjected to GC-MS

analysis after methaneboronation. Based on the full mass spectrum and

retention time in GC, DS was definitely identified from the BL fraction of

brd2 mutant. Characteristic ions and retention time of DS methane-

boronate were as follows: m/z 510 (Mþ, 11), 327 (20), 153 (64), 124 (76),

82 (100); GC retention time of DS was 10.95 min (CS, 11.00 min, and BL,

11.70 min, under the same GC conditions).

The raw level was calculated from peak area at m/z 510 using

a calibration curve of authentic DS. In the first experiment, only the raw

level was shown (0.09 ng/g FW). In the second experiment, the raw level

was 0.11 ng/g FW. Because DS was detected in the BL fraction, its

endogenous level was corrected using the recovery rate of [2H6]brassi-

nolide (55%). The endogenous level was estimated to be 0.20 ng/g FW.

Lamina Joint Inclination Assay

DS and CS were dissolved in ethanol at final concentrations of 10 ng,

100 ng, and 1000 ng/mL. The seeds were germinated, and the seedlings

used in this assay were selected as described by Fujioka et al. (1998).

Six plants were used for each treatment.

Sequence data from this article may be found in the EMBL/GenBank

data libraries under the following accession numbers: rice Dim/dwf1

(AAM01136), Arabidopsis DIM/DWF1 (Q39085), and pea LKB (AAK15493).

ACKNOWLEDGMENTS

We thank Masayo Sekimoto and Makoto Kobayashi (both of RIKEN) for

their technical assistance. Youichi Morinaka, Ikuko Aichi, and Hiroko

Ohmiya (all of Nagoya University) helped with some preliminary prep-

aration. This work was supported in part by a Grant-in-Aid from the

Program for the Promotion of Basic Research Activities for Innovative

Biosciences (M.M., M.U.-T., and H.K.) and a Grant-in-Aid from the

Center of Excellence (M.M. and M.A.).

Received January 18, 2005; revised June 8, 2005; accepted June 8, 2005;

published July 1, 2005.

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2254 The Plant Cell

Page 13: brassinosteroid-deficient dwarf2 Mutant, Defective in the ...The Rice brassinosteroid-deficient dwarf2 Mutant, Defective in the Rice Homolog of Arabidopsis DIMINUTO/DWARF1, Is Rescued

DOI 10.1105/tpc.105.030973; originally published online July 1, 2005; 2005;17;2243-2254Plant Cell

Hasegawa, Motoyuki Ashikari, Hidemi Kitano and Makoto MatsuokaZhi Hong, Miyako Ueguchi-Tanaka, Shozo Fujioka, Suguru Takatsuto, Shigeo Yoshida, Yasuko

Brassinosteroid, DolichosteroneDIMINUTO/DWARF1, Is Rescued by the Endogenously Accumulated Alternative Bioactive

Mutant, Defective in the Rice Homolog of Arabidopsisbrassinosteroid-deficient dwarf2The Rice

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