10
American Mineralogist, Volume 77, pages 741-7 50' 1992 Bondedand promolecule radii for molecules and crystals G. V. Grnns Departments of Geological Sciences and Material Science and Engineering, Virginia Tech, Blacksburg, Viryinia 24061, U.S.A. M. A. SplcxulN Department of Chemistry, University of New England, Armidale, New South Wales 2351, Australia M. B. BorsrN. Jn. Department of Mathematics, Virginia Tech, Blacksburg, Virginia 24601, U.S.A. Ansrucr Within the context of the total electron density distribution, a well-defined set of radii known as bonded radii can be derived by measuring, along the bond path, the distance between the center of an atom and the point of minimum electron density. As the prop- erties of a crystal, including its total energy,are determined by its electron density distri- bution, such radii provide an objective measure of atomic sizeand a basisfor understand- ing and correlating physical and chemical propertres. Bonded radii observed for chloride and oxide anions are not constant for a given co- ordination number, asassumed in derivations of lists of ionic and crystal radii, but increase in a regular way with bond length. On the other hand, bonded radii observed for cations show a much smaller increase with coordination number than that reported in studies of ionic and crystal radii. An examination of the electron density distributions observed for the alkali halides, fluorides, oxides, and silicates indicates that the distributions in such crystalscan be regardedas largely atomic in nature, despite bond type. Promolecule radii calculated for spherically averagedelectron density distributions for correspondingcoor- dinated polyhedra with bond lengthsand angles fixed at values observedin crystalsrepro- duce to within -0.05 A the Tosi-Fumi radii derived for the alkali halides with the rock salt structure and bonded radii observed for the silica polymorphs, BeO, MgO, CuCl, CaFr, and CuBr. The closecorrespondence of promolecule and bonded radii indicates that the electron density distribution of individual atoms in these crystals decreases rapidly with distance.Reliable estimatesof bonded radii of atoms in crystals are obtained from a calculated charge density distribution for the corresponding coordinated polyhedra making up such crystals,using Roothaan-Hartree-Fockwave functions. INrnooucrron tron density differences for a crystal consisting of either For more than half a century, crystallographers have ions or atoms would be small and very difficult to mea- recordedX-ray diffraction patternsfor thousands of cfs- sure' They also suggest that the bonded radius of an atom tals and have been able to account for the scattering'of in-suc]rcrystals,as measured by the electron density dis- X-rays by such crystals quite satisfactority wittr-an iride- tribulion' would be largely independent of charge and pendent atom or procrystal model that employs spheri- bond type' cally averagedatomic scattering factors. Also, in recent y.uir, r.r*"rous workers have attempted a mapping of ltLEcrRoN DENSTTY DTSTRTBUTIONS AND ihe elusive deformation electron deniity (e.g., Coppens BONDED RADII and Hall, 1982; Tsirelson et al., 1990) and have found Within the context of the total electron density distri- that it is very small relative to the total density and dif- bution, p(r), in a crystal, Gourary and Adrian (1960) and ficulttorecoverevenwhenthediffractiondataareprecise later Slater(1965) have argued that a sensible and well- and massive, particularly when the atoms involved are defined list of radii, referred to as bonded radii by Bader heavy(atomicnumberof l0orgreater)(Hirshfeld,l985). et al. (1971) and Bader (1990),can be derived by mea- Bothoftheseobservationsindicatethattheelectronden- suring, along the bond path, the distancebetween the sity distributions in these crystals are largely atomic in center of an atom and the point of minimum electron nature, particularly when the constituent atoms are heavy. density. Such a definition of radii is natural because the They also corroborate Slater's(1965) conclusions that the properties of an atom in a molecule, as well as the total atoms in the alkali halides tend to be more nearly neutral energy of the molecular system, are determined by the than a fully ionic model would indicate and that the elec- $ound-state electron density distribution (Hohenberg and 0003404x/92l0708-0741$02.00 74r

Bonded and promolecule radii for molecules and crystals G ... · atomic radii or with lists of ionic radii. In addition, bond-ed radii recorded for anions are not approximately con-stant,

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Page 1: Bonded and promolecule radii for molecules and crystals G ... · atomic radii or with lists of ionic radii. In addition, bond-ed radii recorded for anions are not approximately con-stant,

American Mineralogist, Volume 77, pages 741-7 50' 1992

Bonded and promolecule radii for molecules and crystals

G. V. GrnnsDepartments of Geological Sciences and Material Science and Engineering, Virginia Tech, Blacksburg, Viryinia 24061, U.S.A.

M. A. SplcxulNDepartment of Chemistry, University of New England, Armidale, New South Wales 2351, Australia

M. B. BorsrN. Jn.Department of Mathematics, Virginia Tech, Blacksburg, Virginia 2460 1, U.S.A.

Ansrucr

Within the context of the total electron density distribution, a well-defined set of radiiknown as bonded radii can be derived by measuring, along the bond path, the distancebetween the center of an atom and the point of minimum electron density. As the prop-

erties of a crystal, including its total energy, are determined by its electron density distri-bution, such radii provide an objective measure of atomic size and a basis for understand-ing and correlating physical and chemical propertres.

Bonded radii observed for chloride and oxide anions are not constant for a given co-ordination number, as assumed in derivations of lists of ionic and crystal radii, but increasein a regular way with bond length. On the other hand, bonded radii observed for cationsshow a much smaller increase with coordination number than that reported in studies ofionic and crystal radii. An examination of the electron density distributions observed forthe alkali halides, fluorides, oxides, and silicates indicates that the distributions in suchcrystals can be regarded as largely atomic in nature, despite bond type. Promolecule radiicalculated for spherically averaged electron density distributions for corresponding coor-dinated polyhedra with bond lengths and angles fixed at values observed in crystals repro-duce to within -0.05 A the Tosi-Fumi radii derived for the alkali halides with the rocksalt structure and bonded radii observed for the silica polymorphs, BeO, MgO, CuCl,CaFr, and CuBr. The close correspondence of promolecule and bonded radii indicates thatthe electron density distribution of individual atoms in these crystals decreases rapidlywith distance. Reliable estimates of bonded radii of atoms in crystals are obtained from acalculated charge density distribution for the corresponding coordinated polyhedra makingup such crystals, using Roothaan-Hartree-Fock wave functions.

INrnooucrron tron density differences for a crystal consisting of either

For more than half a century, crystallographers have ions or atoms would be small and very difficult to mea-

recorded X-ray diffraction patterns for thousands of cfs- sure' They also suggest that the bonded radius of an atom

tals and have been able to account for the scattering'of in-suc]r crystals, as measured by the electron density dis-

X-rays by such crystals quite satisfactority wittr- an iride- tribulion' would be largely independent of charge and

pendent atom or procrystal model that employs spheri- bond type'

cally averaged atomic scattering factors. Also, in recenty.uir, r.r*"rous workers have attempted a mapping of ltLEcrRoN DENSTTY DTSTRTBUTIONS AND

ihe elusive deformation electron deniity (e.g., Coppens BONDED RADII

and Hall, 1982; Tsirelson et al., 1990) and have found Within the context of the total electron density distri-

that it is very small relative to the total density and dif- bution, p(r), in a crystal, Gourary and Adrian (1960) and

ficulttorecoverevenwhenthediffractiondataareprecise later Slater (1965) have argued that a sensible and well-

and massive, particularly when the atoms involved are defined list of radii, referred to as bonded radii by Bader

heavy(atomicnumberof l0orgreater)(Hirshfeld,l985). et al. (1971) and Bader (1990), can be derived by mea-

Bothoftheseobservationsindicatethattheelectronden- suring, along the bond path, the distance between the

sity distributions in these crystals are largely atomic in center of an atom and the point of minimum electron

nature, particularly when the constituent atoms are heavy. density. Such a definition of radii is natural because the

They also corroborate Slater's (1965) conclusions that the properties of an atom in a molecule, as well as the total

atoms in the alkali halides tend to be more nearly neutral energy of the molecular system, are determined by the

than a fully ionic model would indicate and that the elec- $ound-state electron density distribution (Hohenberg and

0003404x/92l0708-0741$02.00 74r

Page 2: Bonded and promolecule radii for molecules and crystals G ... · atomic radii or with lists of ionic radii. In addition, bond-ed radii recorded for anions are not approximately con-stant,

742 GIBBS ET AL.:BONDED AND PROMOLECULE RADII

Fig. 1. A map ofthe static electron density distribution ob-tained in a pseudoatom model refinement ofcoesite, calculatedthrough the plane ofthe Sil-O5-Si2 group. The contour intervalis 0.0625, 0.125, 0.250,. . . , e/Ar. The circle centered on 05and labeled S (Slater, 1964) defines the outermost limit of the Oatom as defined by its atomic radius, and those labeled S&P(Shannon and Prewitt, 1969) and W&G (Wasastjerne, 1923;Goldschmidt et al., 1926') define the outermost limits of the ox-ide ion as defined by its crystal and ionic radii, respectively.

Kohn, 1964; Reiss and Miinch, l98l). Furtherrnore, theelectron density is so distributed that it adopts a config-uration that minimizes the total energy of the resultingconfiguration (Bader, 1981, 1990). It follows, therefore,that the bonded radii provided by such a configurationmust be considered as minimum energy features of sucha system. As a crystal can be viewed as a molecule ofvisible dimensions (Slater, 1939), these arguments maybe extended directly and without loss of generality to acrystalline system.

Figure I shows a map of the electron density distri-bution obtained in a pseudoatom refinement of a set ofX-ray difraction data observed for coesite, a crystallineform of silica with fourfold-coordinate Si (Geisinger etal., 1987). The bonded radii for the atoms that define theSil-O5-Si2 angle of the structure were obtained by mea-suring along the Sil-O5 and Si2-O5 bonds the distancesbetween Sil, Si2, and 05 and the minima in the electrondensity distribution. The measurement for the Sil-O5bond yielded the bonded radii, ro(Sil) : 0.65 A and ro(O5): 0.97 A, and that for Si2-O5 yielded ro(Si2) : 0.67 Aand ro(O5) : 0.95 A (Buterakos, 1990). Concentric cir-cles of radius 0.60 A (Shter's atomic radius for O), l.2lA (crystal radius for Or- of Shannon and Prewitt, 1969),and 1.32 A (Wasastjerne-Goldschmidt ionic radius forO'-) are drawn about 05 and compared with the pointsof minimum electron density as measured along the two

bonds. In terms of the electron density distribution, Sla-ter's (1964) atomic radius is much too small, with itsoutermost extent falling well within the basin of chargedensity belonging to the 05 oxide ion. On the other hand,the outer limits of the crystal and ionic radii assigned to05 both fall well within the basins of charge density be-longing to the two Si atoms. Actually, the bonded radiiof the O atoms in coesite have values that lie about half-way between the atomic and ionic radius of the O atom.Thus, the sizes ofthe bonded radii obtained for the oxideion are seen to be quite different from traditional valuespublished for ionic, crystal, and atomic radii. As revealedby Figure 1, it is clear that the electron density distribu-tion of the SiOSi group is compressed along both SiObonds and is expanded into the empty regions of the coes-ite structure, rendering a nonspherical distribution for 05.We also note that 05 has two marginally different bondedradii, one toward Sil and the other toward Si2, with thelarger one involving the longer Sil-O5 bond.

A relatively fe-w accurate total electron density mapshave been published for crystals over the years from whichbonded radii can be measured (Witte and Wiilfel, 1955;Krug et al., 1955; Schoknecht, 1957; Weiss eI al., 19571,Slater, 1965; Kurki-Suonio and Meisalo, 1966; Meisaloand Inkinen, 1967; Jiirvinen and Inkinen,1967; Spack-man et al., 1987; Downs, l99l). However, as observedby Slater (1965), when such radii are measured, they donot in general agree, as observed above, either with hisatomic radii or with lists of ionic radii. In addition, bond-ed radii recorded for anions are not approximately con-stant, as traditionally assumed for ionic and atomic radii.For example, the bonded radius for Cl, ro(Cl), obtainedfrom experimental electron density maps, increases from1.25 A for a CuCl bond length of 2.35 to 1.64 A for aNaCl bond length of 2.82 to 1.70 A for a KCI bond lengthof 3.15 A lslater, 1965). More recently, O'Keeffe (1979)observed that the apparent radius of the nitride ion incompounds with the rock salt structure increases from1.28 to 1.46 A as the interatomic separation, R(XN),between the metal atom, X, and N increases from 2.05to 2.65 A, wittr the radius of the nitride ion increasinglinearly with bond length. As the coordination numberof the nitride ion is six in a rock salt crystal, this increasecannot be ascribed to a change in coordination number.In a study of more than 500 experimental R(XN) data,Baur (1987) concluded that the ionic radius ofthe nitrideion shows a greater dependence on the coordinationnumber than that observed for the oxide ion (Shannonand Prewitt, 1969). However, no attempt was made totest whether a correlation obtains between bond lengthand the radius ofthe nitride ion. Evidence has also beenpresented by O'Keeffe (1977 , 1979) that suggests that theapparent radius ofthe oxide ion also increases with bondlength. Such variations in radii support the argument madeby Fajans (1941) and Johnson (1973) that anion radiitend to decrease with increasing field strength of the metalatom to which an anion is bonded.

An examination of electron density maps recorded for

Page 3: Bonded and promolecule radii for molecules and crystals G ... · atomic radii or with lists of ionic radii. In addition, bond-ed radii recorded for anions are not approximately con-stant,

GIBBS ET AL.: BONDED AND PROMOLECULE RADII 743

coesite and stishovite, a crystalline form of silica withsixfold-coordinate Si, yields an oxide bonded radius, ro(O),for coesite of0.95 A, averaged over eight nonequivalentSiO bonds, and an oxide bonded radius for stishovite of1.05 A, averaged over two nonequivalent bonds (Spack-man et al., 1987; Geisinger et al., 1987). It is apparentthat ro(O) is 0.10 A larger in stishovite, where R(SiO) is- I .78 A, than it is in coesite, where R (SiO) is - 1.6 I A.Also, the bonded radius of the oxide ion is observed toincrease with R (SiO) (Fig. 2) in both coesite and stishov-ite. In addition, ro(O) obtained from an electron densitymap recorded for periclase, MgO, for which R(MgO) :

2.09 A is even larger: ro(O) : 1.09 A. Collectively, theseresults indicate that there is no such thing as a uniquebonded radius for atoms like Cl, N, and O but that theradii of these anions appear to vary with bond length.

In a careful study of the cohesive energies of the alkalihalides with the rock salt structure type, Tosi and Fumi(1964), Tosi (1964), and Fumi and Tosi (1964) undertooka derivation of a list of crystal radii, using a generalizedHuggins-Mayer form for the repulsive energy, based onexperimental isothermal compressibility and thermal ex-pansion data. The resulting crystal radii match bondedradii obtained from electron density maps recorded forthe alkali halides significantly better than they match thetraditional ionic radii derived by Wasastjerne, Gold-schmidt, Pauling, and others (Slater, 1965). Tosi and Fumi(1964) also observed that the crystal radii of the cationsare -0.2 A hrger than ionic radii, whereas those of theanions were -0.2 A smaller. For instance, the crystalradius for the fluoride ion was found to be 1.19 A, aradius that is significantly smaller than values proposedin earlier studies (1.33-1.36 ,4,).

In their derivation of lists of crystal radii for oxidesand fluorides from - 1000 bond length data, Shannonand Prewitt (1969) and Shannon (1976) accepted the Tosi-Fumi radius of I . 19 A as the sixfold-coordinate radius ofthe fluoride ion. Assuming a difference of 0.07 A betweenthe radii ofthe oxide and the fluoride ions, Shannon andPrewitt (1969) deduced a crystal radius of 1.26 A for asixfold-coordinate oxide anion. Using these two radii andfollowing the strategy used by Goldschmidt el al. (1926)to obtain ionic radii from observed bond length data,they undertook a derivation of a list of crystal radii inwhich the radii were refined to conform with observedbond length data and plots of ionic volumes vs. unit-cellvolume (r3 vs. Z). The resulting radii have since beenfound to reproduce average bond lengths in oxide- andfluoride-coordinated polyhedra in a variety of structuretypes to within -0.01 A when coordination number,electronic spin state, covalency, oxidation, and polyhe-dral distortions are taken into account. These radii havefound wide application, as argued by Prewitt (1985) inhis MSA Presidential Address, in the determination ofthe average bond lengths in oxide and fluoride structuretypes and cation coordination numbers based on radiusratio arguments. They have also provided a basis for cor-relating physical properties, generating structure field

1 . 0 0

0 9 01 8 0 1 . 8 5

R(sio)Fig.2. The bonded radius of the oxide ion, ro(O), measured

from static electron density maps, provided by pseudoatom re-finements of observed diffraction data for coesite and stishovitevs. the observed SiO bond length, R (SiO), in angstroms. Thepseudoatom refinements were completed by Geisinger et aI.(1987) and Spackman et al. (1987), and the bonded radii weremeasured by Buterakos (1990).

maps, and rationalizing diffusion in solids. Despite suchsuccesses, Shannon and Prewitt (1969) did remark thatcrystal and ionic radii may not be realistic indicators ofthe sizes ofions, particularly as they relate to easily de-fined properties of the electronic charge density distri-bution within a crystal (Slater, 1965). Another problem

with the Shannon and Prewitt (1969) crystal radii is theirdetermination of l.2l A for the radius of a twofold-co-ordinate oxide ion. Such a radius requires a negative ra-dius for H* of -0.25 A to reproduce the observed length(0.96 A) of the OH bond. If radii are additive, then theradius of the oxide ion in the molecule is indicated to besignificantly less than 1.0 A, in conformity with the shortOH bond length.

The observation that the Shannon and Prewitt (1969)and the Shannon (197 6) radii generate bond lengths thatmatch average values exhibited by coordinated polyhedrain a variety of oxide and fluoride crystals can be taken asevidence that the average separation between the bondedatoms in such polyhedra is largely independent of theforces exerted on the polyhedra by the other parts ofthecrystal structure, other than those that induced local chargebalance. This result suggests that molecules constructedfrom such coordinated oxide and fluoride polyhedra canserve as useful models for studying bond length andbonded radii variations, provided the molecules are neu-tralized by attaching H atoms, for example, to the pe-

ripheral anions to mimic the local crystal field (Gibbs,

1982). As these molecules are relatively small, molecular

orbital calculations have been completed on a wide va-

li

I

Page 4: Bonded and promolecule radii for molecules and crystals G ... · atomic radii or with lists of ionic radii. In addition, bond-ed radii recorded for anions are not approximately con-stant,

744 GIBBS ET AL.: BONDED AND PROMOLECULE RADII

riety of such molecules, using relatively robust basis sets,to learn whether the resulting bond lengths match ob-served values reported by Shannon and Prewitt (1969)and Shannon (1976). For example, Gibbs et al. (1987)undertook a calculation of the minimum energy bondlengths in hydroxyacid molecules with fourfold-coordi-nate Hr_,X*,Oo polyhedra and sixfold-coordinateH'2-,X*,O6 polyhedra with first- and second-row cations(X: Li through N and Na through S) and found that theresulting bond lengths match those recorded, on average,for similarly coordinated polyhedra in oxide crystals towithin -0.03 A. In addition, Finger and Gibbs (1985)calculated total electron density maps for these moleculesand found, for example, that the bonded radii for Si andO obtained for HoSiOn and HrSiOu match those observedfor coesite and stishovite to within -0.05 A. The radiialso show that ro(O) increases for fourfold-coordinate Xcations from 0.90 A for the SO bond to 1.22 A for theNaO bond. Not only did Gibbs and Boisen (1986) ob-serve that ro (O) increases with R (XO), but they also ob-served that ro(O) decreases, for a given bond length, withthe row number of the X cation. Total electron densitymaps calculated for the molecules SO3, H2SO., H2S2O',and HuSOu show that ro(S) and ro(O) both increase lin-early with R(SO), with the bonded radii of both S and Oincreasing at about the same rate (Lindsay and Gibbs,1988). Similar molecular orbital calculations have beencompleted on hydrosulfide (Bartelmehs et al., 1989) andhydronitride (Buterakos, 1990; Buterakos et al., 1992)molecules. In these studies, the bonded radii for both thesulfide and the nitride ions were found to increase in aregular way with bond length and to decrease with rownumber. It is noteworthy that the cation bonded radiiobtained in each of these molecular orbital studies cor-relate with the available crystal and ionic radii, but theslopes of the lines are not 1.0 because the radius of theanion to which a cation is bonded also increases linearlywith bond length.

PnolrolnculE RADII

A promolecule is defined to be a model of a moleculewhere the electron density distributions ofeach ofits at-oms have been spherically averaged and placed at theirminimum energy positions (Hirshfeld and Rzotkiewicz,197 4). Like the bonded radius of an atom in a molecule,the promolecule radius, ro, of an atom is defined to bethe distance between the nucleus of the atom and thepoint of minimum electron density between the atom andits nearest neighbors, as measured along the line betweenthe atom and each of its neighbors. Spackman and Mas-len (1986) have calculated promolecule radii for 39 dia-tomic molecules, with bond lengths clamped at the valuesrecorded for these molecules, and have found that theresulting promolecule radii match bonded radii obtainedfrom electron density distributions calculated with accu-rate Roothaan-Hartree-Fock wave functions with an es-timated standard error, ese, of 0.06 A. As the difference(deformation electron density) between the Roothaan-

cla '

c

N . t/

M C JI

A l t_ L l

. / P

S i / // t

P 1s , -

/ r E/ B e

/.E

- - ' - B

z N

F

2.O

t . o

><i i 1 4

0 80 .0 0 2

ru (H)

Fig. 3. A plot of the bonded radius for the H atom in XHdiatomic molecules calculated from total electron density mapsgenerated with Hartree-Fock wave functions vs. the minimumenergy R(XH) bond length in angstroms. The data used to pre-pare this plot were taken from Table A3 ofBader (1990). Theopen squares represent X atoms of the first row of the periodictable. and the solid circles represent X atoms of the second.

Hartree-Fock electron density and the promolecule elec-tron density is small, they concluded that bonded radiiderived from electron density maps are largely consistentwith those calculated in the promolecule and, therefore,appear to be largely atomic in nature, despite bond type.In other words, the deformation electron density, whichis very small in comparison with the promolecule elec-tron density, apparently exerts a minor role in determin-ing bonded radii.

A comparison with published lists shows that promole-cule radii, just like bonded radii, calculated for diatomicsand for the silica polymorphs, correlate with but lie be-tween atomic and ionic radii. Spackman and Maslen(1986) also observed that promolecule radii bear littleresemblance to the radii of such anions as F , O2-, andso forth, as determined by Pauling (1927). They also ob-served that bonded radii for a given atom exhibit a rel-atively wide range of values. An examination of theseradii shows, as observed for the hydroxyacid, hydrosul-fide, and hydronitride molecules discussed above, thatthe radii of the nonmetal atoms tend to increase withbond length and to decrease with the row number of themetal atom to which they are bonded (Gibbs et al., I 99 I ).Figure 3 shows, for example, how the bonded radius ofthe H atom measured for a variety of diatomic hydridemolecules varies with bond length. Clearly, for these di-atomics, the radius of the H atom is not constant butincreases from 0. 14 A when bonded to F to 0.90 A whenbonded to Na. Thus, for H in the hydride diatomics and

Page 5: Bonded and promolecule radii for molecules and crystals G ... · atomic radii or with lists of ionic radii. In addition, bond-ed radii recorded for anions are not approximately con-stant,

GIBBS ET AL.: BONDED AND PROMOLECULE RADII 745

0.0 2.o 4.o

r (bohrs)

0.001 -t-0.0 2.O 4.O

r (bohrs)

Fig. 5. The spherically averaged electron density, (p(r)), plot-ted as a function of r for Na (a) and Cl (b) atoms. The electrondensities were calculated for neutral ground state atoms, usingthe Roothaan-Hartree-Fock wave functions published by Cle-menti and Roetti (1974) (1 bohr : 0.529 A).

ecules can be explained in terms of a linear dependenceon the promolecule radius with an ese of 0.06 A. Thisindicates, as observed by Spackman and Maslen (1986)for diatomic molecules, that bonded radii can be regardedas largely atomic in nature.

Calculations show that the spherically averaged elec-tron density distribution, (p(r)), of an atom falls offrap-idly with increasing dislance, r, from its nucleus. This factis illustrated for both the Na and Cl atoms in Figure 5,where it is seen that (p(r)) is less than 0.01 e/b3 for an rvalue of -3 bohrs (l bohr :0.529 A). fnis suggests,because (p(r)) diminishes rapidly with r, that promole-cule radii for atoms making up the coordinated polyhedrain crystals can be accurately estimated by completing acalculation on model polyhedra whose bond lengths andangles are clamped at the values observed for a crystal.We tested this assertion by calculating the promoleculeradii of Na and Cl for a NaCl dimer, for a NaClu-coor-dinated octahedron, for a ClNau octahedron and for aunit cell of NaCl of Na,rCl,o composition. In each of thesecalculations, R(NaCD was fixed at 2.82 A, and eachLNaClNa and /ClNaCl was clamped at 90.0', as ob-served in the rock salt structure. The calculation for theNaCl dimer yielded promolecule radii of r"(Na) : 1.168A and r"(Cl) : 1.652 A, compared with ro(Na) : 1.169A and r"(Cl) : 1.651 A calculated for the NaClu octahe-dron, ro(Na) : 1.165 A and r"(Cl) : 1.655 A calculatedfor the

-ClNa. octahedron, and ro (Na) : I . I 66 A and r" (Cl)

: 1.654 A calculated for the NaClu-coordinated polyhe-dron centered al Vz,r/z,lz in the unit cell. The values ofro(Na) and ro(Cl) obtained for the isolated NaClu octa-hedron and for the one in the NaCl unit cell and thoseobtained for the ClNau octahedron are identical for ourpurposes. What may be surprising is that the promoleculeradii obtained for the ClNa. octahedron and for bothNaClu octahedra agree to within 0.003 A with that cal-culated for the NaCl dimer, demonstrating that the efectof (p(r)) is not long-ranged. Witte and Wiilfel (1955) cal-culated electron density maps for a NaCl crystal withobserved X-ray diffraction data and reported bonded ra-dii of 1.17 A for Na* and 1.64 A for Cl-, radii that agreeto within 0.01 A of the promolecule radii calculated forthe NaCl. octahedra. A map of the promolecule electron

' t00

1 0

0.1

kt . b

0.'l

0.01

0.001

0.or

tr

o.4o.4

rP

Fig. 4. Bonded radii, ro, vs. promolecule radii, ro, calculatedfor hydroxyacid (Gibbs et al., 1987), hydrosulfide (Bartelmehset al., I 989), and hydronitride rnolecules (Buterakos et al., I 992).

for the O, N, and S in hydroxyacid, hydrosulfide, andhydronitride molecules, not only do the bonded radii showa relatively wide range ofvalues, but they also correlatewith the length of the bond in which they participare. Acalculation of the promolecule radii for the H and O at-oms in the HrO molecule and the OH group yields r"(H): 0.20 A and r"(O) : 016 A. The promolecule radiusfor H is positive and -0.45 A hrger than the crystalradius derived by Shannon and Prewitt (1969), and ro(O)is, as expected, smaller than it is in coesite and stishovite.The bonded radius of the O atom obtained from a Har-tree-Fock structure determination of the electron densityof the OH molecule (0.77 A) is in close agreement (Bader,1990) with that provided by the calculation on the pro-molecule.

A connp.lnrsoN oF pRoMoLEcuLE RADIr wITHBONDED RADII

Promolecule radii, calculated for the hydroxyacid mol-ecules studied by Finger and Gibbs (1985), for the hy-drosulfide molecules studied by Bartelmehs et al. (1989)and for the hydronitride molecules studied by Buterakoset aI. (1992), are plotted in Figure 4 against the bondedradii calculated for these molecules with robust 6-3lG*basis sets. The charge density distributions for the pro-molecules were calculated (see Appendix l) with Root-haan-Hartree-Fock wave functions expressed as a linearcombination ofSlater-type functions, squared and spher-ically averaged. A linear regression analysis ofthe bondedradii as a function of the resulting promolecule radii cal-culated for the molecules shows that more than 960/o ofthe variation of the bonded radii calculated for these mol-

t o

( o ) (b )

Page 6: Bonded and promolecule radii for molecules and crystals G ... · atomic radii or with lists of ionic radii. In addition, bond-ed radii recorded for anions are not approximately con-stant,

746

Fig. 6. A total electron density map calculated through a planedefined by Na and four Cl atoms in an NaClu octahedron. Themap was calculated using the sum ofthe electron densities fromspherically averaged atoms calculated from the Roothaan-Hart-ree-Fock wave functions (Clementi and Roetti, 1974). The kthcontour, counting from the corners of the map, corresponds tothe value (3.0 x 10-4)(1.3u ')e/b3. The contours at the atom cen-ters have been omitted.

density calculated through the center of a NaCl octahe-dron is displayed in Figure 6. Despite the fact that themap was calculated for superimposed spherically aver-aged Na and Cl atoms, the resulting electron density dis-tribution shows a slight polarization in the direction ofthe NaCl bond, a feature that might be erroneously as-cribed to covalency.

Another test is provided by a careful determination byDowns (1983) of the electron density distribution of bro-mellite, BeO, using X-ray diffraction data. The bromellitestructure can be described as a hcp eutactic array of Oatoms in which one-half of the available tetrahedral sitesare filled by Be. The term eutactic, as defined by O'Keeffe(1977), means that the centers of the oxide ions in BeOare arranged as those in an hcp metal, but the ions donot make contact with one another as assumed by Braggand Brown (1926) in their analysis of the structure offorsterite.

As all of the BeOo tetrahedra in BeO are equivalent,the corners of each such tetrahedron are shared by fourBeO,-coordinated tetrahedra. Three ofthe four BeO bondsat the base of each tetrahedron are equivalent and arecalled basal bonds, whereas the fourth lies along the caxis of the crystal and is called the apical bond. The re-finement of the structure shows that the length of theapical bond (1.655 A) is slightly but significantly longerthan that of the basal bonds (1.647 A;. In an excellentreview of the electrostatic properties of the mineral,

GIBBS ET AL.: BONDED AND PROMOLECULE RADII

Downs (1991) determined the bonded radii of Be and Oin procrystal and the pseudoatom model refinements. Likea promolecule, a procrystal is defined to be a collectionof atoms whose electron density distributions have beenspherically averaged and placed at their equilibrium po-sitions in the crystal (Coppens and Hall, 1982).

The BeO procrystal electron density distribution mea-sured by Downs (1983) yielded bonded radii for the api-cal bond [r"(Be) : 0.579 A, ro(O) : 1.076 A1 that aresimilar to those of the basal bonds [ro(Be) : 0.577 A,ro(O) : 1.070 Al. These values show close agreementwith promolecule radii calculated for a BeOo-coordinatedtetrahedron [apical bond: ro(Be) : 0.581, r,(O) : 1.074;basal bonds: r"(Be) : 0.579, ro(O) : 1.068 A1 whosebond lengths and angles were clamped at the values ob-served for the BeOo group in BeO. The close agreementbetween these two lists of radii demonstrates again thatpromolecule radii calculated for a model coordinatedpolyhedron with a geometry matching that in a crystalprovides a good estimate of bonded radii. The pseudo-atom refinement provided bonded radii for the apical bond

[r , (Be) :0.569 A, ro(O): 1.086 A] and basal bonds

[r"(Be) : 0.562 A, ro(O) : 1.085 A1 tnat match thoseobtained in the procrystal refinement to within 0.015 A,suggesting that charge density distribution in BeO has adominant atomic component. Despite traditional de-scriptions of the structure of BeO as a hcp array of largeoxide ions with the smaller Be atoms tucked away in theavailable tetrahedral voids, the bonded radii obtained inDown's (1991) review supports O'Keeffe's (1977) argu-ments that oxide ions in structures like BeO should bedescribed as eutactic close packed rather than just closepacked and making contact (O'Keeffe and Hyde, 1985).A description of such structures with the oxide ions incontact is clearly wrong insofar as the electron densitydistribution of the crystals is concerned. The close agree-ment in promolecule and procrystal bonded radii ob-tained for both NaCl and BeO provides support for theassertion that accurate radii can be obtained for crystalsby completing a calculation for coordinated polyhedrawith the bond lengths and angles clamped at the observedvalues.

As observed earlier, Tosi and Fumi (1964) publisheda list of radii for the alkali halides that match bondedradii obtained from experimental electron density mapssignificantly better than they match traditional ionic ra-dii. To learn how well the Tosi-Fumi radii agree withpromolecule radii, radii were calculated for X% octahe-dra where X: Li, Na, K, and Rb and I: F, Cl, Br, andI with R (XY) set at values observed for the alkali halides.The resulting promolecule radii are plotted against theTosi-Fumi radii in Figure 7. A linear regression analysisof these data shows that99o/o of the variation of the Tosi-Fumi radii for the alkali halides can be explained in termsof a linear dependence on the calculated promolecule ra-dii. With the exceptions of NaF and RbCl, whose pro-molecule radii depart bv 0.07 A from the Tosi-Fumi crys-tal radii, all the remaining promolecule radii agree with

Page 7: Bonded and promolecule radii for molecules and crystals G ... · atomic radii or with lists of ionic radii. In addition, bond-ed radii recorded for anions are not approximately con-stant,

GIBBS ET AL.: BONDED AND PROMOLECULE RADII 747

tr

1 . 0

rp

Fig. 8. Bonded radii, rb, obtained from experimental electrondensity distributions measured for NaCl, RbCl, LiF, KCl, KBr,coesire, stishovite, Mgo, Nio, cucl, cuBr, Beo, and caF, vs.promolecule radii, r,, calculated for the nonequivalent coordi-nation polyhedra in each of these crystals \,\dth the bond lengthsand angles fixed at observed values.

ear regression analysis of these data shows that 97o/o ofthe variation in the bonded radii can be explained interms of a linear dependence on the calculated promole-cule radii. As the ese is 0.05 A, we conclude that theelectron density distribution in each of these crystals isalso indicated to have a large atomic component, like thatof the procrystal.

In their derivation of a list of crystal radii for the ox-ides, Shannon and Prewitt (1969) and Shannon (1976)obtained a crystal radius of 0.40 A for fourfold-coordi-nate Si and a radius of0.54 A for sixfold-coordinate Si,requiring the SiO bond length in an octahedron to be 0. l4A longer, on average, than it is in a tetrahedron. In con-trast, the radius of the oxide ion obtained in their studyshows a much smaller increase (0.02 A) for a change incoordination number from 2 to 3. As observed above,the total electron density maps recorded for the silicapolymorphs indicate that the bonded radius of the O atomincreases 0.12 A with an increase in its coordinationnumber from 2 to 3, whereas that of the Si atom is in-dicated to increase by only 0.04 A with an increase ofcoordination number from 4 to 6. In other words. it isthe bonded radii ofthe oxide anion that show the largerincrease in size with increasing coordination number,whereas in the case of crystal radii, the reverse seems tobe true, with the cations showing the larger increase insize with coordination number. On the other hand, bond-ed radii recorded for S and O increase at about the samerate in S-containing hydroxyacid molecules with increas-ing coordination of S and R(SO) (Lindsay and Gibbs,I 988) .

'I .8

t{

2.OO

t - / J

1 . 5 0

t -13

1 . 0 0

0.750. 1 . 2 5 1 . 5 0 1 . 7 5 2 0 0

Tosi -Fumi rad i iFig. 7. Tosi-Fumi radii calculated for Xlalkali-halide crys-

tals with the rock salt structure vs. promolecule radii calculatedfor XYu coordinated polyhedra with a geometry matching thatin the crystal. The Tosi-Fumi radii were taken from Table 3 ofTosi and Fumi (1964).

the Tosi-Fumi radii for the alkali halides with an ese of0.03 A. This result suggests, as asserted by Slater (1965),that the electron density distributions in the alkali halideshave a large atomic component. The observation by Tre-fry et al. (1987) that the electron density distributionscalculated for LiCl and NaF crystals with atomic wavefunctions are strikingly similar to those calculated for thecrystals with ionic wave functions provides additionalsupport for Slater's assertion. That is, that the electrondensity distributions in each of these crystals can be re-garded as similar to that of the procrystal. Trefry et al.(1987) also observed that a calculation of the electrostaticenergies for the alkali halides, assuming procrystal mod-els for the electron density distributions, yields energiesthat match observed cohesive energies with an ese of 0.70eV compared with those estimated with calculated Ma-delung energies, which show an ese of 1.38 eV. It is note-worthy that the Madelung energies calculated for the al-kali halides systematically overestimate cohesive energies,whereas procrystal electrostatic energies are more ran-domly distributed around the cohesive energies and pro-vide better estimates.

In an examination of the extent to which promoleculeradii correlate with bonded radii obtained from experi-mental electron density maps in general, promolecule ra-dii were also calculated for the coordinated polyhedra incoesite, stishovite, MgO, NiO, CuCl, CuBr, BeO, andCaFr, crystals for which experimental total electron den-sity maps have been published. The resulting radii, to-gether with those calculated for the alkali halides with therock salt structure, are plotted in Figure 8 against thebonded radii obtained from electron density maps. A lin-

0 .67 5 1 0 0 0 .6

Page 8: Bonded and promolecule radii for molecules and crystals G ... · atomic radii or with lists of ionic radii. In addition, bond-ed radii recorded for anions are not approximately con-stant,

748 GIBBS ET AL.:BONDED AND PROMOLECULE RADII

As observed earlier, O'Keeffe (1979) has shown thatthe apparent radius ofsixfold-coordinate N correlates lin-early with the length of the XN bond. A similar resultobtains for bonded radii observed for the O atoms in thesilica polymorphs, for the O, S, and N atoms in hydroxy-acid, hydrosulfide, and hydronitride molecules, and forthe H atom in a variety of hydride diatomic molecules.A calculation of the promolecule radii for the nitride an-ion in VN, CrN, TiN, and ScN yields radii of 1.01, 1.02,I .03, and I .09 A for XN bonds of length 2.06, 2.07 , 2.12,and 2.22 A, respectively. Although these radii are -0.25

A smaller than those derived by O'Keeffe (1979), theyare positively correlated with bond length, as observed,with an 12 value of 0.99. These results support the obser-vation by O'Keeffe (1977, 1979, 1981) that "it seemsquite clear that one should not ascribe a constant radiusto an ion, particularly to anions such as 02- and N3 ."

DrscussroN

Despite the successful use oflists ofionic radii in cor-relating physical and chemical properties and in gener-ating structural field maps, O'Keetre (198 l) argued thatthese lists are little more than lists of bond lengths forestimating the average separations between bonded at-oms in coordinated polyhedra. He continued by assertingthat little significance should actually be attached to thevalues of these radii other than that they are ordinal. Itis, after all, the bond lengths that are well known, not theradii. Thus, it is the averaged bond lengths provided bysuch lists that should be used to ascertain whether oneatom will substitute for another in a coordinated poly-hedron without destabilizing a stmcture. For the samereason, such bond lengths, rather than the radii them-selves, should also be used to generate structural fieldmaps. Furthermore, the determination of coordinationnumbers from radius ratio considerations is questionableat best, particularly when the radius of the anion is notconstant but shows significant variations.

More than 30 years ago, Mooser and Pearson (1959)showed that the coordination numbers adopted by theatoms in a variety of binary compounds are related tothe average principal quantum number of the valenceelectrons of a pair of bonded atoms and their electronega-tivity difference rather than to radius ratio considera-tions. More recently, Phillips (1970) showed that the co-ordination numbers adopted by cdtions in a variety ofX"Y-" compounds appear to be governed in large part bythe fractional ionic character oftheir bonds. By plottingthe covalent energy gap widths against the ionic energygap widths for a large number of compounds, he foundthat fourfold-coordinate compounds could be separatedfrom sixfold-coordinate compounds into disjoint sets, withcompounds with large covalent gaps adopting fourfold-coordinate structures. An examination of compounds withthe CsCl-structure type with eightfold-coordinate cationsshows that these compounds can also be separated fromfourfold- and sixfold-coordinate compounds into anotherdisjoint set with large ionic band widths. As radius ratio

arguments fail to predict the observed coordination num-bers for a number of the alkali halides as well as manyothers (Phillips, 197 4; O'Keeffe, 1977; Tossell , 1979), aneffort should be made to purge from textbooks the notionthat the coordination number of a cation in a coordinatedstructure is governed by the relative sizes of the cationand anion that make up the coordinated polyhedra. Infact, Burdett (1982) finds it surprising that the radius ra-tio rule is still being used as a predictive tool in crystalchemistry, particularly in light of its utter failure to pre-dict the correct coordination number for more than 40o/oof the alkali halides (Phillips, 1974).

Bonded radii obtained from electron density maps showthat it is unreasonable to assume a unique radius for an-ions like 02 , S2-, and N3- inasmuch as each is observedto increase in a regular way with bond length. As ob-served by O'Keefe (1981), the term radius implies thatthe electron density distribution of an atom is sphericaland that it is the same in all directions. However, thebonded radius of an atom, as the term implies, refers tothe outer extent of the atom as measured by the mini-mum in the electron density in the direction of a bond.It does not, however, provide a measure ofthe outer ex-tent ofan atom in other directions. Since the distance tothe minimum depends on the nature of the atom to whichit is bonded, often the atom is not spherical but mayexhibit several different "radii" rather thanjust one. It isdoubtful whether the electron density distribution aboutan atom in a molecule or a crystal will ever be spherical.Undoubtedly, it will be compressed by the atoms to whichit is bonded and extended toward the more empty regions,as observed by Kurki-Suonio and Meisalo (1966) for thefluoride ion in CaFr. The term radius is clearly unsatis-factory when used in this context, as argued by O'Keeffe,but its niche is so well carved into the parlance of crystalchemistry that it would seem counterproductive to dis-card it at this late date in favor of another term,

Finally, the determination of accurate bonded radii fromthe electron density distribution in a crystal using X-raydiffraction data is a nontrivial and difrcult undertakingthat requires a variety of favorable experimental condi-tions and utmost care in data reduction (Downs, 1991).Nonetheless, as demonstrated in this study, promoleculeradii calculated for the component-coordinated polyhe-dra in a crystal reproduce bonded radii obtained fromexperimental electron density maps to within -0.05 A.As such radii are easy to calculate, they can be obtainedfor any coordinated structure, providing the structure isknown. In addition to providing a meaningful measureof atomic size, such radii provide a basis for understand-ing and correlating physical and chemical properties.

AcxNowlnncMENTs

G.V.G. wishes to thank the University of New England at Armidale,New South Wales, Australia, for inviting him to the Chemistry Depart-

ment as a Visiting Research Fellow during the spring of 1991, where a

significant part ofthis work was completed. He also wishes to thank the

chemistry faculty and Geoff Richie and Mark Spackman, in particular,

Page 9: Bonded and promolecule radii for molecules and crystals G ... · atomic radii or with lists of ionic radii. In addition, bond-ed radii recorded for anions are not approximately con-stant,

for their kind hospitality and for making the visit a very exciting andprofitable experience. We thank Sharon Chiang for skillfully drafting aportion of Figure 1. G.V.G. and M B.B. also wish to thank the NationalScience Foundation for generously supporting their research program tostudy bonding in minerals vdth gant EAR-8803933

It is a pleasure to dedicate this paper to F. Donald Bloss in honor ofhis 70th birthday and his pioneering contributions in mineralogy.

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750 GIBBS ET AL.: BONDED AND PROMOLECULE RADII

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MeNuscmrr RECETvED J.q.NUaRy 10, 1992MeNuscrusr AcCEPTED Mmcn 3- 1992

AppnNorx 1.

The goal of this appendix is to present a strategy forcalculating the electron density distribution for a promol-ecule, i.e., an array of atoms whose electron density dis-tributions have each been spherically averaged and areindependent ofone another. Suppose that the wave func-tion ofan electron on an atom isolated from this array isdefined by R",(r)Y,-(0,9), then the charge density of theelectron, R|,Q)Y,*(|$, can be spherically averaged overthe values of the polar angles d and d for a given valueofr by evaluating the integral

R|,(r)Y l-(0,9)r2sin 0 d0 d 6(p(r)) :

As the independence of r and / is irrelevant because thecharge density has been spherically averaged, both termscan be consolidated into a single term, t : nl, where tdefines electron type (i.e., ls, 2s, 2p, etc.). When morethan one atom is considered, the R, associated with anelectron of some atom q will be denoted by R,.

According to the discussion in Clementi and Roetti(1974), given an atom a and one ofits electrons oftypet, Ro, can be expressed as a linear combination of Slatertype orbitals, denoted (STO)^, (r):

c,(STO)^,(r)

for choices of the parameters tr and p that are appropriatefor an atom a and a type of electron /. The expression for(STO)^,(r) is given by (Slater, 1930)

(STO)^, (r) : l(2 n^,)lj-' / 2 (21 ̂,)"' n' * r'^, -' e- r\e r .

The values of f^, and C^, were determined in SCF calcu-lations that minimize the total energy of the atom a. Theresulting f^p and C, values used in this study to calculatepromolecule charge densities for ground-state neutral at-oms with Z < 54 are given by Clementi and Roetti (1974).

Given an array of independent atoms 4 with rypes ofelectrons /, the promolecule electron density function p(p)for this array can be calculated at each point in space,represented by the end point of a vector p emanatingfrom a chosen origin. This is done with the formula

p$:2 2fttn",1a"6111

where N,, is the number of electrons of tpe t in atom aand d"(p) is the distance from the center of any atom ain the promolecule to the end point of p.

To accomplish the calculations presented in this paper,a Fortran 77 program called Promin was written. Givenany two atoms, at and a2, in a promolecule, Promin findsthe point along the line between al and a, at which p(p)is minimum, yielding the promolecule radii of a, and. ar.An analytic gradient is calculated at this minimum pointto determine whether it qualifies as a (3,-l) or a bondcritical point in a three-dimensional ball around the point(Bader, 1990).

(p(r)) : _ R?(r)4r4rrz

R",(r): ?

I,* I," r,sin o do ds

Rl,(r)P Y?*(0,o)sin 0 d0 do

," I," J" rt" o do do

Since

defines the surfac.e area of a sphere of radius r, and sincethe spherical harmonics, Y,^(0,e), are normalized

,, I,'" J" rt" o do do:4trr2

I"'" 1," "r-r,d)sin d do do : r.o

it follows for a single electron that

r,RIQ)