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ORIGINAL PAPER
Association between OGG1 gene single nucleotide polymorphismsand risk of pancreatic cancer in Chinese
Chengli Liu • Hui Huang • Cheng Wang •
Yalin Kong • Hui Zhang • Hongyi Zhang
Received: 28 April 2014 / Accepted: 16 May 2014
� Springer Science+Business Media New York 2014
Abstract Previous studies have suggested that the
8-oxoguanine DNA glycosylase gene (OGG1) has poten-
tially influenced the risk of pancreatic cancer. The objec-
tive of this study was to assess the association between
single nucleotide polymorphisms (SNPs) of OGG1 gene
and risk of pancreatic cancer. A case–control study has
been conducted in 370 pancreatic cancer patients and 395
healthy controls. Genotypes were determined using the
polymerase chain reaction–restriction fragment length
polymorphism and DNA sequencing methods. The asso-
ciation analysis was evaluated by the unconditional logistic
regression test. Our data suggested that the distributions of
alleles and genotypes were statistically different between
pancreatic cancer patients and healthy controls. The
c.307G[C SNP was associated with the decreased risk of
pancreatic cancer (C vs. G: OR 0.73, 95 % CI 0.59–0.91,
P = 0.006). As for c.828A[G SNP, the significantly
decreased risk of pancreatic cancer was detected (G vs. A:
OR 0.74, 95 % CI 0.59–0.92, P = 0.006). The allele C of
c.307G[C and allele G of c.828A[G SNPs might be
associated with a protection from pancreatic cancer.
Findings from this study indicate that OGG1 SNPs are
associated with pancreatic cancer risk in Chinese Han
population and could be useful molecular biomarkers for
assessing the risk of pancreatic cancer.
Keywords Pancreatic cancer � Cancer susceptibility �OGG1 gene � Single nucleotide polymorphisms �Molecular markers
Introduction
Pancreatic cancer is one of the most common cancer-
related deaths for both men and women worldwide [1–5]. It
causes a constantly rising health burden in the world, with
a 5-year survival rate of less than 5 % [1–3]. It has been
proposed that the possible risk factors for pancreatic cancer
include gender, age, alcohol consumption, smoking status,
body mass index, overweight, diabetes mellitus, genetic
variants and family history of pancreatic cancer [3, 6–9].
Up to date, the exact mechanism of pancreatic cancer still
remains uncertain. Previous studies have shown that the
8-oxoguanine DNA glycosylase gene (OGG1) is an
important candidate gene for influencing the development
of pancreatic cancer [3–5, 10–14]. The OGG1 gene, loca-
ted on chromosome 3p26, is one of the component of DNA
base excision repair (BER) pathway, which play an
important role in repairing damaged DNA [14]. OGG1 is
polygenetic gene, and the OGG1 genetic variants may
affect the expression and function of OGG1 proteins,
which contributing to the risk of pancreatic cancer and
influencing the prognosis of patients. Currently, several
single nucleotide polymorphisms (SNPs), such as proline
(Pro) 90 glutamine (Gln), Serine (Ser) 209Ser, Arginine
(Arg) 299 Glutamine (Gln) and Ser326 Cysteine (Cys),
have been considered to be associated with the risk of
pancreatic cancer [3–5, 11–13]. However, no related
studies have reported the effects of OGG1c.307G[C and
c.828A[G SNPs on influencing the risk of pancreatic
cancer. Therefore, considering the importance of the role of
C. Liu (&) � C. Wang � Y. Kong � H. Zhang � H. Zhang
Department of Hepatobiliary Surgery, The Air Force General
Hospital of People’s Liberation Army, No. 30 Fucheng Road,
Haidian District, Beijing 100142, People’s Republic of China
e-mail: [email protected]
H. Huang
Department of Hepatobiliary Surgery, The 309th Hospital
of Chinese People’s Liberation Army, Beijing 100091,
People’s Republic of China
123
Med Oncol (2014) 31:40
DOI 10.1007/s12032-014-0040-6
OGG1 genetic variants in the development of pancreatic
cancer, the purpose of this study is to evaluate the potential
association between these two SNPs and the risk of pan-
creatic cancer.
Materials and methods
Studied subjects
The study included 370 patients diagnosed and pathologi-
cally confirmed with pancreatic cancer and 395 healthy
unrelated individuals as controls. All subjects were enrol-
led from the Air Force General Hospital of People’s Lib-
eration Army (Beijing, China) between January 2010 and
October 2013. The healthy controls were frequency-mat-
ched to pancreatic cancer patients on gender and age,
excluding those with a history of cancer and other medical
diseases. All individuals were of Chinese Han ethnicity.
Table 1 summarizes the general characteristics of the
pancreatic cancer patients and healthy controls, including
gender, age, alcohol consumption, smoking status, diabetes
mellitus body mass index and family history of pancreatic
cancer. The study was approved by the Ethics Committees
of the Air Force General Hospital of People’s Liberation
Army (Beijing, China). Written informed consent was
obtained from each study individual.
DNA extraction and genotyping
The peripheral venous blood was collected from each
enrolled pancreatic cancer patients and healthy controls.
Genomic DNA was extracted from the peripheral venous
blood using the proteinase K digestion and phenol–chlo-
roform extraction. According to the reference sequences
(GenBank IDs: NG_012106.1 and NM_002542.5) of
human OGG1 gene, the specific polymerase chain reaction
(PCR) primers were designed by Primer Premier 5.0 soft-
ware (Premier Biosoft International, Palo Alto, CA, USA).
The primers sequences, annealing temperature, amplifica-
tion fragment size and region are given in Table 2. The
PCR amplification was carried out in a total volume of
20 lL mixture which containing 50 ng template DNA, 19
buffer (100 mmol Tris–HCl, pH 8.3; 500 mmol KCl),
0.25 lmol primers, 2.0 mmol MgCl2, 0.25 mmol dNTPs
(Bioteke Corporation, Beijing, China) and 0.5 U Taq DNA
polymerase (Promega, Madison, WI, USA). The PCR was
stared at 94 �C for 5 min, followed by 32 cycles at 94 �C
Table 1 Characteristics of the
pancreatic cancer cases and
controls
SD standard deviation
* P values calculated by Chi-
square (v2) test
Characteristics Pancreatic
cancer cases (n)
Controls
(n)
v2 values P values*
Number 370 (%) 395 (%)
Gender (n)
Male 242 (65.41) 253 (64.05) 0.1535 0.6952
Female 128 (34.59) 142 (35.95)
Age (years)
Mean ± SD 57.31 ± 15.45 58.26 ± 16.37 0.0025 0.9598
\55 167 (45.14) 179 (45.32)
C55 203 (54.86) 216 (54.68)
Smoking status 0.9548 0.3285
Never 211 (57.03) 239 (60.51)
Ever 159 (42.97) 156 (39.49)
Alcohol consumption 0.0720 0.7885
Never 226 (61.08) 245 (62.03)
Ever 144 (38.92) 150 (37.97)
Body mass index 0.0060 0.9381
\23 176 (47.57) 189 (47.85)
C23 194 (52.43) 206 (52.15)
Diabetes mellitus (n) 3.1439 0.0762
Yes 107 (28.92) 92 (23.29)
No 263 (71.08) 303 (76.71)
Family history of pancreatic cancer (n) 2.8092 0.0937
Yes 68 (18.38) 55 (13.92)
No 302 (81.62) 340 (86.08)
40 Page 2 of 6 Med Oncol (2014) 31:40
123
for 32 s, at the corresponding temperature (presented in
Table 2) for 32 s, at 72 �C for 32 s, and then an extension
at 72 �C for 5 min. The OGG1 SNPs were genotyped by
the PCR–restriction fragment length polymorphism (PCR–
RFLP) method. According to the manufacturer’s instruc-
tions, each PCR amplified products was digested with 5
units selected restriction enzyme (MBI Fermentas, St.
Leon-Rot, Germany, Table 2) at 37 �C for 10 h and then
verified by agarose gel electrophoresis containing ethidium
bromide and observed under UV light. For quality control,
10 % subjects that present different genotypes were ran-
dom examined using DNA sequencing method (ABI3730xl
DNA Analyzer, Applied Biosystems, Foster City, CA,
USA) to confirm the genotyping results from PCR–RFLP
method.
Statistical analysis
The Hardy–Weinberg equilibrium (HWE) test was per-
formed for the distributions of OGG1 SNPs in the case and
control groups. The Chi-square (v2) test was utilized to
compare the distributions of OGG1 SNPs, and the differ-
ences of general characteristics between pancreatic cancer
patients and healthy controls. To evaluate the potential
associations between the OGG1 SNPs and the susceptibility
to pancreatic cancer, the odds ratios (ORs) with their 95 %
confidence intervals (CIs) were estimated by unconditional
logistic regression analysis. The statistically significant was
settled at P value less than 0.05. All statistical analyses were
analyzed by the STATA 14.0 (Stata Corp., College Station,
TX, USA) and SPSS 15.0 (SPSS Inc., Chicago, IL, USA)
software programs.
Results
Subject characteristics
The subject characteristics are summarized in Table 1. A
total of 765 subjects were enrolled in this case–control study,
which containing 370 pancreatic cancer patients (male: 242,
female: 128, mean age ± standard deviation (SD):
57.31 ± 15.45) and 395 healthy controls (male: 253, female:
142, mean age ± SD: 58.26 ± 16.37). The healthy controls
were comparable with the pancreatic cancer patients in
regard to the distributions of gender, age, alcohol con-
sumption, smoking status, diabetes mellitus, body mass
index and family history of pancreatic cancer (all p values
[0.05, Table 1).
Genotyping and distribution of OGG1 SNPs
Through the PCR–RFLP and DNA sequencing methods, two
novel OGG1 SNPs (c.307G[C and c.828A[G) were
detected in the Chinese Han populations. As for c.307G[C
SNP, sequence analysis indicates that this SNP is a
nonsynonymous mutation. It causes from G to C mutations in
exon2 of human OGG1 gene and leads to aspartic acid (Asp)
to histidine (His) amino acid replacement (p.Asp103His,
reference sequences GenBank IDs: NG_012106.1,
NM_002542.5 and NP_002533.1). The PCR amplified pro-
ducts of this SNP were digested with MaeI restriction
enzyme and divided into three genotypes: GG (170 and
42 bp), GC (212, 170 and 42 bp) and CC (212 bp, Table 2).
As for c.828A[G SNP, sequence analysis reveals that this
SNP is a synonymous mutation. It causes from A to G
mutations in exon5 of human OGG1 gene (p.Gln276Gln).
The MaeII restriction enzyme has been utilized to digest the
PCR amplified products of c.828A[G SNP. All three pos-
sible genotypes have been observed: AA (191 and 25 bp),
AG (216, 191 and 25 bp) and GG (216 bp, Table 2). Table 3
summarizes the genotypic and allelic frequencies of these
two SNPs in cases and controls. As for c.307G[C SNP, the
frequencies of allele G and genotype GG in pancreatic cancer
patients were higher than healthy controls (Table 3). The
allelic frequencies of pancreatic cancer patients (G,
73.78 %; C, 26.22 %) were not consistent with healthy
controls (G, 67.34 %; C, 32.66 %), the differences being
statistically significant (v2 = 7.6180, P = 0.0058, Table 3).
The genotypic frequencies of pancreatic cancer patients
Table 2 The PCR primers and PCR–RFLP method used for investigating OGG1 SNPs
SNPs Primer sequences Annealing
temperature (�C)
Amplification
fragment (bp)
Region Restriction
enzyme
Genotype (bp)
c.307G[C 50-CCACACCAGACGAGCTGGAG-30 61.0 212 Exon2 MaeI GG:170,42
50-TAATCCCCATTTTACAGGTGGC-30 GC:212,170,42
CC:212,
c.828A[G 50-CAACAGTAACCCCAGAGTGAAGG-30 61.7 216 Exon5 MaeII AA:191,25
50-TGGTAGGGTGCCAGCTGTAGTC-30 AG:216,191,25
GG:216
SNPs single nucleotide polymorphisms, PCR polymerase chain reaction, PCR–RFLP PCR–restriction fragment length polymorphism
Med Oncol (2014) 31:40 Page 3 of 6 40
123
(GG, 56.49 %; GC, 34.59 %; CC, 8.92 %) were signifi-
cantly different from those in healthy controls (GG,
46.08 %; GC, 42.53 %; CC, 11.39 %; v2 = 8.3079,
P = 0.0157, Table 3). As for c.828A[G SNP, the allele
frequencies of pancreatic cancer patients were significantly
different from healthy controls (for pancreatic cancer
patients: A, 72.70 %; G, 27.30 %; for healthy controls: A,
66.20 %; G, 33.80 %, v2 = 7.5947, P = 0.0059). The
genotype frequencies of pancreatic cancer patients were not
consistent with healthy controls, the differences being sta-
tistically significant (for pancreatic cancer patients: AA,
54.32 %; AG, 36.76 %; GG, 8.92 %; for healthy controls:
AA, 45.32 %; AG, 41.77 %; GG, 12.91 %, v2 = 7.1155,
P = 0.0285, Table 3). The genotype distribution of these
two SNPs in cases and healthy controls fitted with HWE (all
p values[0.05).
Association of OGG1 SNPs with pancreatic cancer risk
Table 4 shows the potential association of OGG1 SNPs
with pancreatic cancer risk. As for c.307G[C SNP, there
were significantly decreased risk of pancreatic cancer in
the heterozygote comparison (GC versus (vs.) GG: OR
0.66, 95 % CI 0.49–0.90, v2 = 7.02, P = 0.008), domi-
nant model (CC/GC vs. GG: OR 0.66, 95 % CI 0.50–0.88,
v2 = 8.28, P = 0.004) and allele contrast (C vs. G: OR
0.73, 95 % CI 0.59–0.91, v2 = 7.61, P = 0.006). As for
c.828A[G SNP, the significantly decreased risk of pan-
creatic cancer were found in the homozygote comparison
(GG vs. AA: OR 0.58, 95 % CI 0.36–0.93, v2 = 5.09,
P = 0.024), heterozygote comparison (AG vs. AA: OR
0.73, 95 % CI 0.54–0.99, v2 = 3.99, P = 0.046), domi-
nant model (GG/AG vs. AA: OR 0.76, 95 % CI 0.52–0.93,
v2 = 6.19, P = 0.013) and allele contrast (G vs. A: OR
0.74, 95 % CI 0.59–0.92, v2 = 7.59, P = 0.006).
Discussion
Pancreatic cancer is nowadays a common malignancy
worldwide and has a high incidence. It is well known that
the development of pancreatic cancer is a complex and
multifactorial process from environmental and genetic
factors [15–17]. There is no doubt that the genetic factors
play key functions in the pathogenesis of pancreatic cancer
[10, 15–22]. In recent years, OGG1 gene has been selected
as one of the most potentially candidate genes for affecting
pancreatic cancer risk [3–5, 10–14], and these observa-
tions indicated that OGG1 genetic variants might be
associated with the risk of pancreatic cancer [3, 4, 11–13].
Zhang and his colleagues detected a statistically signifi-
cantly increased risk for the variant allele (326Cys) of
OGG1 Ser326Cys genetic variant compared with the wild-Ta
ble
3T
he
gen
oty
pe
and
alle
lefr
equ
enci
eso
fc.
30
7G[
Can
dc.
82
8A[
GS
NP
so
fO
GG
1g
ene
inp
ancr
eati
cca
nce
rp
atie
nts
and
hea
lth
yco
ntr
ols
Gro
ups
c.307G[
Cv2
Pc.
828A[
Gv2
P
Gen
oty
pe
freq
uen
cies
(%)
All
ele
freq
uen
cies
(%)
Gen
oty
pe
freq
uen
cies
(%)
All
ele
freq
uen
cies
(%)
GG
%G
C%
CC
%G
%C
%A
A%
AG
%A
A%
A%
G%
Pan
crea
tic
cance
rpat
ients
(n=
370)
209
56.4
9128
34.5
933
8.9
2546
73.7
8194
26.2
24.1
396
0.1
262
201
54.3
2136
36.7
633
8.9
2538
72.7
0202
27.3
02.0
231
0.3
637
Hea
lthy
subje
cts
(n=
395)
182
46.0
8168
42.5
345
11.3
9532
67.3
4258
32.6
60.4
314
0.8
060
179
45.3
2165
41.7
751
12.9
1523
66.2
0267
33.8
01.7
486
0.4
171
Tota
l(n
=765)
391
51.1
1296
38.6
978
10.2
01078
70.4
6452
29.5
43.8
077
0.1
490
380
49.6
7301
39.3
584
10.9
81061
69.3
5469
30.6
54.2
476
0.1
196
v2=
8.3
079,
P=
0.0
157*
v2=
7.6
180,
P=
0.0
058*
v2=
7.1
155,
P=
0.0
285*
v2=
7.5
947,
P=
0.0
059*
*P
val
ues
calc
ula
ted
by
Chi-
squar
e(v
2)
test
40 Page 4 of 6 Med Oncol (2014) 31:40
123
type allele (326Ser) (Ser/Cys or Cys/Cys vs. Ser/Ser: OR
1.57, 95 % CI 1.04–2.39). Results from Zhang’s study
suggested that OGG1 genetic variants could influence the
risk of pancreatic cancer [13]. Li et al. indicated that the
homozygous variants of OGG1 G2657A showed a weak
but significant effect on overall survival of patients with
pancreatic cancer. The observations indicated that OGG1
genetic variants significantly influenced the clinical out-
come of pancreatic cancer patients [11]. Chen et al. [5]
observed that that the OGG1 Pro90Gln and Ser209Ser
SNPs were statistically associated with the decreased risk
of pancreatic cancer compared with wild genotype (for
Pro90Gln, AA vs. CC: OR 0.44, 95 % CI 0.27–0.73,
P = 0.001; for Ser209Ser, CC vs. TT: OR 0.57, 95 % CI
0.35–0.94, P = 0.028). Li et al. [4] found that there was a
weak interaction of OGG1 Ser326Cys genetic polymor-
phism CC/CG genotype with diabetes in increased risk of
pancreatic cancer. Nakao et al. [3] found that there was no
significant association with pancreatic cancer risk for the
OGG1 Ser326Cys genetic variant. McWilliams et al. [12]
suggested that no significant differences in the risk of
pancreatic cancer were detected for the OGG1 Arg299Gln
and Ser326Cys SNPs. However, results from these studies
are still inconsistent rather than conclusive. In the current
study, the influencing of OGG1 c.307G[C and c.828A[G
genetic variants on the risk of pancreatic cancer was
determined by association analysis in 370 pancreatic can-
cer patients and 395 healthy controls. We detected that
these two SNPs were statistically associated with pancre-
atic cancer and have significant impact on the risk of
pancreatic cancer in Chinese Han population (Table 4).
Our data suggested that the frequencies of allele and
genotype in pancreatic cancer patients were significantly
different from those of controls for these two SNPs (All
P \ 0.05, Table 3). As for c.307G[C SNP, the GC
genotype and CC/GC carriers were statistically associated
with the decreased susceptibility to pancreatic cancer
compared to wild GG genotype (P = 0.008 and 0.004,
Table 4). As for c.828A[G SNP, the GG genotype, AG
genotype and GG/AG carriers were statistically associated
with the decreased susceptibility to pancreatic cancer
compared with wild AA genotype (P = 0.024, 0.046 and
0.013, Table 4). Results from this study indicated that the
allele C of c.307G[C and allele G of c.828A[G SNPs may
contribute to be associated with a protection from pancre-
atic cancer (P = 0.006, Table 4). The OGG1 genetic
variants could impact on the expression and function of
OGG1 proteins, which influencing the risk of pancreatic
cancer. Our sequences analysis suggested that c.307G[C
genetic variant is a nonsynonymous mutation and causes
Asp to His amino acid replacement (p.Asp103His), and it
might be after the function of OGG1 protein. Although the
c.828A[G genetic variant is a synonymous coding variant
in OGG1 gene (p.Gln276Gln), this genetic variant may
linked to other known nonsynonymous genetic variants,
such as Pro90Gln, Ser209Ser, Arg299Gln and Ser326Cys,
which have been approved to influence the function of
OGG1 proteins and significantly associated with the risk of
pancreatic cancer [4, 11, 13]. To the best of our knowledge,
this is the first investigation regarding the potential influ-
ence of OGG1 c.307G[C and c.828A[G SNPs with the
risk of pancreatic cancer. Our findings indicate that these
two SNPs are significantly associated with the decreased
risk of pancreatic cancer in Chinese Han population and
could be useful molecular biomarkers for evaluating the
risk of pancreatic cancer.
In summary, our data provide evidence for the associ-
ation of OGG1 c.307G[C and c.828A[G SNPs with the
risk of pancreatic cancer. Our finding is suggestive but
need to be confirmed in larger different ethnic populations,
Table 4 The association between OGG1 c.307G[C and c.828A[G SNPs and pancreatic cancer risk
SNPs Comparisons OR (95 % CI) v2 value P values*
c.307G[C CC vs. GG (homozygote comparison) 0.64 (0.39–1.04) 3.23 0.072
GC vs. GG (heterozygote comparison) 0.66 (0.49–0.90) 7.02 0.008
CC/GC vs. GG (dominant model) 0.66 (0.50–0.88) 8.28 0.004
CC vs. GC/GG (recessive model) 0.76 (0.47–1.22) 1.27 0.259
C vs. G (allele contrast) 0.73 (0.59–0.91) 7.61 0.006
c.828A[G GG vs. AA (homozygote comparison) 0.58 (0.36–0.93) 5.09 0.024
AG vs. AA (heterozygote comparison) 0.73 (0.54–0.99) 3.99 0.046
GG/AG vs. AA (dominant model) 0.70 (0.52–0.93) 6.19 0.013
GG vs. AG/AA (recessive model) 0.66 (0.42–1.05) 3.11 0.078
G vs. A (allele contrast) 0.74 (0.59–0.92) 7.59 0.006
SNPs single nucleotide polymorphisms, OR odds ratio, CI confidence interval, vs. versus
* P values calculated by Chi-square (v2) test
Med Oncol (2014) 31:40 Page 5 of 6 40
123
and the underlying molecular mechanisms for pancreatic
cancer carcinogenesis should be fully elucidated.
Acknowledgments None.
Conflict of interest The authors declare no conflict of interests.
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