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    Review

    Current perspectives

    on antifungal lactic

    acid bacteria as

    natural

    bio-preservatives

    Sarah Crowleya,Jennifer Mahonya and

    Douwe van Sinderena,b,*aDepartment of Microbiology, University College

    Cork, Cork, IrelandbAlimentary Pharmabiotic Centre, University College

    Cork, Cork, Ireland (Tel.: D353 21 490 1365;fax: D353 21 490 3101; e-mail: [email protected])

    Fungal spoilage of foods represents a major cause of

    concern for food manufacturers. The use of lactic acid bacteria

    (LAB) to alleviate fungal decay of foods and feeds is a prom-ising solution. The study and application of antifungal LAB

    has received a surge of interest in recent years. Significant

    progress has been reported on the isolation and characteriza-

    tion of antimycotic compounds, which include various organic

    acids, cyclic dipeptides and fatty acids, while various food-

    based applications of these antifungal LAB have been

    described in literature. This review summarizes the current

    knowledge on antifungal LAB, their bioactive metabolites, ap-

    plications in food systems and interactions with their target

    fungi.

    Overview of lactic acid bacteriaLactic acid bacteria (LAB) encompass a heterogeneousgroup of Gram-positive, non-sporeforming, non-motile,

    aerotolerant, rod and coccus-shaped organisms, which pro-

    duce lactic acid as a major end product during carbohydrate

    fermentation. Early taxonomy defined four main core

    genera involved in food fermentations, namely

    Lactobacillus,Leuconostoc,Pediococcusand Streptococcus

    (Wessels et al., 2004). However, reclassifications have

    amended this original grouping and the LAB group is

    currently comprised of the following genera: Aerococcus,

    Alloiococcus, Carnobacterium, Dolosigranulum, Entero-

    coccus, Globicatella, Lactobacillus, Lactococcus, Lactos-

    phaera, Leuconostoc, Mlissococcus, Oenococcus,

    Pediococcus, Streptococcus, Tetragenococcus, Vagococcus

    and Weisella (Ruas-Madiedo, Sanchez, Hidalgo-

    Cantabrana, Margolles, & Laws, 2012). For centuries,

    LAB have been exploited as biopreservative microorgan-isms, and as such they perform a critical role in a diversity

    of food fermentations involving milk, meats, vegetables and

    sourdoughs by inducing rapid acidification of the raw ma-

    terial. With increasing pressure from consumers towards

    more natural food preservatives, LAB represent ideal can-

    didates for commercial exploitation due to their GRAS

    (Generally Regarded As Safe) status and their Qualified

    Presumption of Safety (QPS) status in the EU, and conse-

    quently the scientific exploration of their potential as

    biocontrol agents has enjoyed consistent and growing inter-

    est. Aside from their preserving qualities, certain LAB are

    also associated with health-promoting/probiotic properties.

    Members of theLactobacillusand Enterococcusgenera arecommonly exploited for their probiotic potential (Saito,

    2004). Proposed mechanisms of action of probiotic LAB

    include modulation of the immune response and the pro-

    duction of antimicrobial compounds to exclude pathogens,

    among others (Dicks & Botes, 2010).

    Antifungal metabolites of LABOrganic acids

    LAB produce organic acids such as lactic, acetic and

    propionic acid as fermentation end products of carbohy-

    drate metabolism. The production of these weak organic

    acids results in an acidic environment which generally re-

    stricts growth of both bacteria and fungi, including many

    pathogenic and spoilage microbes (Ross, Morgan, & Hill,2002). The antimicrobial effects of these acids are attrib-

    uted to the reduction of pH to a level below the range of

    growth and metabolic inhibition by non-dissociated organic

    acid molecules (Batish, Roy, Lal, & Grover, 1997). The

    mechanisms by which organic acids inhibit fungal growth

    are still not fully understood. Acetic acid is believed to

    have a synergistic effect with lactic acid in preventing

    fungal growth, however, acetic acid is described as more* Corresponding author.

    0924-2244/$ - see front matter 2013 Elsevier Ltd. All rights reserved.http://dx.doi.org/10.1016/j.tifs.2013.07.004

    Trends in Food Science & Technology xx (2013) 1e17

    Please cite this article in press as: Crowley, S., et al., Current perspectives on antifungal lactic acid bacteria as natural bio-preservatives, Trends in Food

    Science & Technology (2013), http://dx.doi.org/10.1016/j.tifs.2013.07.004

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    potent due to its higher pKa value causing it to have a

    higher level of dissociation inside the cell (Batish et al.,

    1997; Dang, Vermeulen, Ragaert,and Devlieghere, 2009).

    Propionic acid also exerts anti-mould and anti-yeast activ-

    ities and displays a pKa value of 4.87, which is higher

    than that of acetic acid (pKa 4.76) (Lind, Jonsson, &

    Schnurer, 2005). Various organic acids produced by LABhave been implemented as fungal inhibitors, where syner-

    gistic effects are believed to be involved. For example, a

    mixture of acetic, formic, propionic, butyric, caproic and

    n-valeric acid, was held responsible for the broad spectrum

    anti-mould activity by Lactobacillus sanfranciscensis CB1

    (Corsetti, Gobbetti, Rossi, & Damiani, 1998). However,

    the short chain fatty acid caproic acid was shown to

    contribute the most towards the inhibition ofFusarium gra-

    minearum. In a recent report, lactic and acetic acid were the

    main antifungal substances produced by Leuconostoc cit-

    reum and Weisella confusa isolates (Baek, Kim, Choi,

    Yoon, & Kim, 2012), and at concentrations higher than

    17.5 mM, these organic acids were shown to be responsible

    for retarding growth ofCladosporium sp. YS1 andPenicil-

    lium crustosum YS2.

    Other carboxylic acids are also receiving attention as

    antifungal agents derived from LAB. Nine carboxylic acids

    including three cinnamic acid derivatives,D-glucuronic acid

    and salicylic acid were all isolated as antifungal compounds

    from Lactobacillus amylovorus DSM 19280 (Ryan et al.,

    2011). An array of carboxylic acids were detected in silos

    inoculated with Lactobacillus plantarum MiLAB 14 and

    MiLAB 393 (Table 1) (Broberg, Jacobsson, Strom, &

    Schnurer, 2007). Benzoic, vanillic, azealic, hydrocinnamic,

    and hydroxybenzoic acids, in conjunction with a number of

    other carboxylic acids, were isolated from Weisella cibaria

    PS2 and three Lactobacillus species by Brosnan, Coffey,Arendt, and Furey (2012). Furthermore, some of the car-

    boxylic acids identified by Broberg et al. (2007) and

    Brosnanet al. (2012), i.e. hydrocinnamic, azealic, vanillic,

    p-couramic, and 4-hydroxybenzoic acid, were also shown

    to be produced by Lactobacillus reuteri eep1 (Guo et al.,

    2012).

    Phenyllactic acid (PLA)PLA has been widely reported as an antimicrobial com-

    pound, which possesses broad spectrum antibacterial and

    antifungal action, and which is perhaps one of the most

    extensively studied antifungal organic acids from LAB.

    Bactericidal activities have been observed against both

    Gram-positive and negative bacteria, such as Listeria mono-cytogenes, Staphylococcus aureus and Escherichia coli

    (Dieuleveux, Lemarinier, & Gueguen, 1998). PLA has

    recurrently been isolated as the causative agent of fungal

    inhibition in a number of studies over the last decade and

    usually plays a synergistic role with other metabolites

    (Dal Bello et al., 2007; Rizzello, Cassone, Coda, &

    Gobbetti, 2011; Ryan et al., 2011; Strom, Sjogren,

    Broberg, & Schnurer, 2002). The lack of toxicity to animal

    and human cell lines and absence of an apparent odour

    makes PLA a potential candidate for the control of food

    spoilage, possibly in concert with complementary treat-

    ments (Lavermicocca, Valerio, & Visconti, 2003). The pro-

    duction of phenyllactic acid by LAB was first described by

    Lavermicocca et al. (2000), who isolated this compound

    from the cell free supernatant of Lb. plantarum strain21B together with its corresponding 4-hydroxy derivative.

    Sourdough fermentations started with Lb. plantarum 21B

    prevented spoilage by the fungal strain Aspergillus niger

    FTDC3227 for at least seven days, as compared to the con-

    trol (containing the non-antifungal producer Lactobacillus

    brevis1D), which allowed growth of this spoilage strain af-

    ter just two days. PLA was also the subject of a study inves-

    tigating bakery moulds performed by Lavermicocca et al.

    (2003), where it was shown to delay growth of mycotoxi-

    genic strains ofPenicillium verrucosumand Penicillium cit-

    rinum. Compared to the findings of these authors lower

    MIC values, between 6.5 and 12 mg ml1

    , were reported

    for PLA produced by a Lb. plantarum strain against fungal

    spoilers such asAspergillus fumigatusandPenicillium cam-

    emberti (Prema, Smila, Palavesam, & Immanuel, 2010). A

    variety of Lactobacillus species, such as Lb. plantarum,

    Lactobacillus coryniformis, Lb. reuteri, Lactobacillus ros-

    siae, Lactobacillus alimentarius, Lactobacillus rhamnosus

    and Lactobacillus fermentum have been shown to produce

    PLA as an antifungal compound, though production levels

    vary from isolate to isolate (Table 1).

    Valerio, Lavermicocca, Pascale, and Visconti (2004)

    screened a collection of diverse LAB associated with

    food preservation, for PLA and 4-hydroxyphenyllactic

    acid (OH-PLA) production. Interestingly, each of the 29 as-

    sayed strains produced PLA and/or OH-PLA at different

    levels, with Leuconostoc mesenteroides subsp. mesenter-oides ITMY30 producing the highest quantity of PLA

    (0.57 0.04 mM). Further studies revealed that the pres-

    ence of increased levels of the amino acid phenylalanine

    (Phe) resulted in increased levels of PLA. In 2007 Li and

    colleagues described the conversion of Phe to PLA as a

    rate-limiting step and demonstrated that production of

    PLA was increased 14-fold through addition of the precur-

    sor phenylpyruvic acid (PPA) to the growth medium (Li,

    Jiang, & Pan, 2007). Subsequent studies in 2008 reported

    the purification and partial characterization of lactate dehy-

    drogenase (LDH) from Lactobacillus species SK007 as the

    enzyme responsible for conversion of PPA to PLA. Since

    LDH catalyzes the reduction of pyruvate to lactate, it was

    deduced that the production of PLA by LAB strains maybe due to the conversion of PPA to PLA (Li, Jiang, Pan,

    Mu, & Zhang, 2008). Optimization of the growth medium

    ofLactobacillus sp. SK007 led to an improved PLA yield

    of 2.30 g L1

    (Mu, Chen, Li, Zhang, & Jiang, 2009). The

    improved medium utilizes corn steep liquor as a replace-

    ment to peptone (in MRS agar) as the sole nitrogen source

    and may be useful for improving PLA production by

    currently used antifungal LAB strains.

    2 S. Crowley et al. / Trends in Food Science & Technology xx (2013) 1e17

    Please cite this article in press as: Crowley, S., et al., Current perspectives on antifungal lactic acid bacteria as natural bio-preservatives, Trends in Food

    Science & Technology (2013), http://dx.doi.org/10.1016/j.tifs.2013.07.004

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    Table 1. Isolated and chemically characterized antifungal compounds produced by LAB.

    LAB isolate Source Antifungal compound(s) isolated & identified Reference(s)

    Lb. sanfranciscensisCB1 Sourdough Acetic, caproic, formic, propionic, butyric andn-valeric acids

    Corsettiet al., 1998

    Lactobacillus pentosusTV35 Vagina Pentocin TV35b Okkers et al., 1999Lb. plantarumVTT E-78076 Beer Benzoic acid, mevalonolactone,

    methylhydantoin and cyclo(glycl-L-leucyl)

    Niku-Paavolaet al., 1999

    Lb. plantarum21B Sourdough PLA and 4-hydroxyphenyllactic acid Lavermicoccaet al., 2000Lb. plantarumMiLAB 393 Grass silage Cyclo(l-Phe-l-Pro), Cyclo(l-Phe-trans-4-OH-l-Pro)

    and 3-PLAStromet al., 2002

    Lb. coryniformisSi3 Grass Cyclo(Phe-Pro), cyclo(Phe-4-OH-Pro), PLA,reuterin

    Magnussonet al., 2003

    Lb. plantarumMiLAB 14 Lilac flowers 3-(R)-hydroxydecanoic acid, 3-hydroxy-5-cis-dodecanoic acid, 3-(R)-hydroxydodecanoicacid and 3-(R)-hydroxytetradecanoic acid

    Sjogrenet al., 2003

    Lb. plantarumMiLAB 14,Lb. plantarumMiLAB 393

    Lilac flowersGrass silage

    3-hydroxydecanoic acid, 2-hydroxy-5methylpentanoic acid, benzoic acid,catechol, hydrocinnamic acid, salicylic acid,3-PLA, 4-hydroxybenzoic acid, (trans, trans)-3,4-dihydroxycyclohexane-1-carboxylic acid,p-hydrocouramic acid, vanillic acid, azealicacid, hydroferulic acid, p-coumaric acid,hydrocaffeic acid, ferulic acid and caffeic acid

    Broberget al., 2007

    Lb. plantarumFST 1.7 Malted barley Lactic acid, PLA, cyclo(L-Leu-L-Pro) andcyclo(L-Phe-L-Pro)

    Dal Belloet al., 2007

    Lactobacillus paracaseisubsp.paracaseiSM20,P. jenseniiSM11

    Raw milk Propionic acid, acetic acid, lactic acid,succinic acid, 2-pyrrolidone-5-carboxylic acid,3-phenyllactic acid and hydroxyphenyllactic acid

    Schwenninger et al., 2008

    Lb. plantarumstrain Grass silage 3-PLA Premaet al., 2010Lb. plantarumAF1 Kimchi Cyclo(LeueLeu),d-dodecalactone Yang & Chang, 2010;

    Yang et al., 2011Lb. plantarumLB1, Lb.rossiaeLB5

    Raw wheat germ Lactic acid, PLA and formic acid Rizzelloet al., 2011

    Lb. amylovorusDSM 19280

    Cereal environment Lactic acid, acetic acid, salicylic acid,D-glucuronic acid, cytidine, 20-deoxycytidine,sodium decanoate, p-coumaric acid,3-phenylpropanoic acid, (E)-2-methylcinnamicacid, 3-PLA, 3-(4 hydroxyphenyl)lactic acid,cyclo(L-Pro-L-Pro), cyclo(L-Leu-L-Pro),

    cyclo(L-Try-L-Pro), cyclo(L-Met-L-Pro)and cyclo(L-His-L-Pro)

    Ryanet al., 2011

    Lb. plantarumVE56,W. paramesenteroidesLC11

    Fermented cassava 2-hydroxy-4 methylpentanoic acid Ndaganoet al., 2011

    Lb. plantarumIMAU10014 Koumiss 3-PLA; benzeneacetic acid and 2 propenylester

    Wang, Shen, et al., 2012

    Lb. caseiAST18 Unknown Cyclo-(Leu-Pro), 2,6-diphenyl-piperidine,5,10-diethoxy-2,3,7,8-tetrahydro-1H and6Hdipyrrolo[1,2-a;10,20-d]pyrazine

    Liet al., 2012

    Lb. amylovorusFST2.1,LactobacillusarizonensisR13,Lb. plantarumFST 1.7,Lb. reuteriR2,W. cibariaPS2

    Cereal environment,cheese, maltedbarley, a, a (respectively)

    DL-r-hydroxyphenyllactic acid,1,2-dihydroxybenzene, 4-hydroxybenzoicacid, vanillic acid, (S)-()-2-hydroxyisocaproicacid, 3-(4-hydroxy-3-methoxy-3-methoxyphenyl)propanoic acid,p-coumaric acid, azelaic acid, PLA,benzoic acid, hydrocinnamic acid,

    3-hydroxydecanoic acid, DL-b-hydroxylauricacid, decanoic acid, 2-hydroxydodecanoicacid, DL-b-hydroxymyrstric acid, salicylic acid,hydrocinnamic acid D9, 1,2 e dihydroxybenzeneand 3-(4-hydroxy-3-methoxyphenyl)propanoic acid

    Brosnanet al., 2012

    Lb. reuteriee1p Porcine (S)-(-)-2-hydroxyisocapric acid, hydrocinnamic acid,phenyllactic acid, decanoic acid, azealic acid,4-hydroxybenzoic acid, p-coumaric acid,vanillic acid, DL-b-hydroxyphenyllactic acidand 3-hydroxydecanoic acid

    Guoet al., 2012

    Lb. hammesiiDSM 16381 French wheat sourdough Mono-hydroxy C18:1 fatty acid Blacket al., 2013

    a Not specified.

    3S. Crowley et al. / Trends in Food Science & Technology xx (2013) 1e17

    Please cite this article in press as: Crowley, S., et al., Current perspectives on antifungal lactic acid bacteria as natural bio-preservatives, Trends in Food

    Science & Technology (2013), http://dx.doi.org/10.1016/j.tifs.2013.07.004

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    ReuterinReuterin is a broad spectrum antimicrobial substance

    produced by Lb. reuteri (Axelsson, Chung, Dobrogosz, &

    Lindgren, 1989). This low molecular weight compound

    was found to exhibit antimicrobial activity against a range

    of Gram-positive and Gram-negative bacteria, such as Sal-

    monella typhimurium and E. coli K12, while it was alsodemonstrated to be capable of inhibiting growth of a range

    of moulds and yeasts, including Candida albicans and

    Aspergillus flavus (Axelsson et al., 1989). An increased

    antifungal effect was observed when Lb. coryniformis

    strains produced 3-HPA from glycerol (Nakanishi et al.,

    2002). This activity was further corroborated by evidence

    provided by Magnusson, Strom, Roos, Sjogren, and

    Schnurer (2003) when the addition of glycerol to the

    growth medium of variousLb. coryniformisstrains resulted

    in a marked increase in antifungal activity towards a

    collection of food-spoilage fungi. Glycerol/diol dehydra-

    tase enzymes catalyze the conversion of glycerol to 3-

    HPA. The presence of a glycerol/diol dehydratase operon

    (pdu operon) in Lb. coryniformis Si3 was confirmed by

    PCR amplification of the pdu genes suggesting that the

    observed increase in inhibition was attributed to the pro-

    duction of reuterin with the breakdown products of glyc-

    erol degradation; 1,3-propanediol and 3-HPA, detected in

    the culture supernatant of the cells. Production of 3-HPA

    by a Lb. coryniformis strain and its associated antifungal

    activity against Pichia sp. Y1 was also demonstrated in

    silage (Tanaka et al., 2009). The antimicrobial mechanism

    of reuterin towards E. coli was recently discerned

    (Schaefer et al., 2010). Microarray analysis of E. coli

    exposed to reuterin revealed increased expression of genes

    under the control of OxyR, a transcriptional regulator

    which induces upregulation of genes in response to periodsof oxidative stress. It was determined that the aldehyde

    group of reuterin (which is highly reactive) interacts with

    thiol groups of small molecules and proteins causing

    oxidative stress to the cell, which may then lead to growth

    inhibition.

    Cyclic dipeptidesCyclic dipeptides, also known as 2,5 dioxopiperazines,

    are among the most common peptide derivatives found in

    nature. Various bioactive properties are associated with

    these dipeptides, including antimicrobial and antitumoral

    activities, while they may also be involved in quorum

    sensing processes (Rhee, 2004). The property of cyclic di-

    peptides produced by LAB to act as antifungal agents hasbeen demonstrated in several studies as described below.

    The cyclic dipeptide cyclo(glycyl-L-leucyl) was isolated

    from the culture filtrate of Lb. plantarum VTT E-78076

    as a compound that retards growth of the Gram-negative

    bacterium Pantoea agglomerans as well as the cereal

    mould Fusarium avenaceum (Niku-Paavola, Laitila,

    Mattila-Sandholm, & Haikara, 1999). Strom et al. (2002)

    investigated the antifungal compounds produced by Lb.

    plantarum MiLAB 393, a grass silage isolate, which was

    shown to exert inhibitory effects towards several moulds

    and yeasts, including Fusarium porotrichioides and Kluy-

    veromyces marxianus. Two cyclic dipeptides, cyclo(L-

    Phe-L-Pro) and cyclo(L-Phe-trans-4-OH-L-Pro), were

    shown to be responsible for the observed inhibitory activ-

    ities. An MIC value of 20 mg ml1

    was determined forcyclo(L-Phe-L-Pro) against A. fumigatus and Penicillium

    roqueforti. Weak synergistic effects were demonstrated

    against both of these fungi when cyclo(L-Phe-L-Pro) and

    PLA were used in combination, resulting in the MIC of

    cyclo(L-Phe-L-Pro) being reduced to 10 mg ml1. It is

    noteworthy that the MICs of cyclic dipeptides are relatively

    high compared to other antimicrobial peptides. Further ev-

    idence of antimycotic cyclic dipeptides was presented by

    Dal Bello et al. (2007) as cyclo(L-Leu-L-Pro) and

    cyclo(L-Phe-L-Pro) were detected in the supernatant of

    Lb. plantarumFST 1.7. The presence of cyclic dipeptides

    in wheat bread and sourdough started by Lb. plantarum

    FST 1.7 was investigated by Ryan, Dal Bello, Arendt,

    and Koehler (2009). The latter work showed that acidifica-

    tion and temperature play an important role in the produc-

    tion of cyclic dipeptides, although their concentrations were

    lower than the required MIC for spoilage fungi. Therefore

    these authors concluded that the cyclic dipeptides play a

    minimal role in bread preservation, yet may impact on sen-

    sory attributes. Despite the fact that they are produced by a

    variety of lactobacilli, the modus operandiand biochemical

    pathways of cyclic dipeptides as antifungal inhibitors has

    not yet been defined.

    Fatty acidsFatty acids possess both antibacterial and antifungal abil-

    ities (Bergsson, Arnfinnsson, Steingrimsson, & Thormar,2001). The chain length of the fatty acid appears to play an

    important role in antimicrobial action with longer chain

    lengths deemed optimal for inhibition. Previous studies

    have shown that lauric (C12) and capric (C10) acids were

    the most potent fatty acids against C. albicans (Bergsson

    et al., 2001). However, short chain fatty acids with antifungal

    activity have also been described. The fungicidal character-

    istics of fatty acids and their hydroxy derivatives produced

    by LAB have been described in a number of studies.

    Sjogren, Magnusson, Broberg, Schnurer, and Kenne (2003)

    identified, using a combination of Nuclear Magnetic Reso-

    nance (NMR), electrospray ionization mass spectrometry

    (ESI-MS) and gas chromatographyemass spectrometry

    (GCeMS), four antifungal hydroxylated fatty acidsproduced byLb. plantarumMiLAB 14 as 3-(R)-hydroxyde-

    canoic acid, 3-hydroxy-5-cis-dodecenoic acid, 3-(R)-hy-

    droxydodecanoic acid and 3-(R)-hydroxytetradecanoic acid

    (Table 1). Pronounced antifungal activity was directed to-

    wards several moulds and yeasts, however, yeasts were found

    to be more sensitive to such hydroxylated fatty acids with re-

    ported MICs between 10 and 100 mg ml1. Elevated levels

    of two hydroxyl fatty acids, 3-hydroxydecanoic acid and

    4 S. Crowley et al. / Trends in Food Science & Technology xx (2013) 1e17

    Please cite this article in press as: Crowley, S., et al., Current perspectives on antifungal lactic acid bacteria as natural bio-preservatives, Trends in Food

    Science & Technology (2013), http://dx.doi.org/10.1016/j.tifs.2013.07.004

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    2-hydroxy-4-methylpentanoic acid, in combination with

    other antifungal compounds were detected in silage inocu-

    lated withLb. plantarumstrains MiLAB 393 or MiLAB 14

    (Broberg et al., 2007). 2-hydroxy-4-methylpentanoic acid

    was also retrieved from the concentrated cell-free superna-

    tant (cCFS) ofLb. plantarum VE56 and Weisella paramesen-

    teroides LC11. This fatty acid is thought to act in synergywith other inhibitory metabolites and was shown to be

    responsible for growth arrest ofAspergillusand Penicillium

    species (Ndagano, Lamoureux, Dortu, Vandermoten, &

    Thonart, 2011). In a recent study (Brosnanet al., 2012), six

    fatty acids including 3-hydroxydecanoic acid and DL-b-hy-

    droxymyristic acid were detected in the supernatant of

    certain antifungal LAB (Table 1). Similarly, three fatty

    acids (hydroxyisocapric acid, decanoic acid and

    3-hydroxydecanoic acid) isolated from Lb. reuteri ee1p

    were found to target dermatophytes (Guo et al., 2012).

    LAB are furthermore documented to produce hydroxyl fatty

    acids from linoleic acid (Kishimoto et al., 2003). Black,

    Zannini, Curtis, and Ganzle (2013)described the conversion

    of linoleic acid to a mono-hydroxyoctadecanoic fatty acid by

    Lactobacillus hammesi DSM 16381, which displayed anti-

    fungal characteristics and a MIC of 0.7 g L1 against

    A. niger. The fatty acid was treated to isolate coriolic

    (13-hydroxy-9,11-octadecadienoic) acid and ricinoleic

    (12-hydroxy-9-octadecenoic) acid, which exhibited MICs

    ofupt o2.4gL1

    . It wasobservedthat thefatty acid structure

    is an important factor in antifungal activity with a require-

    ment of at least one hydroxyl group and one double bond

    along the carbon backbone. To date there is limited informa-

    tion available discerning the mode of action of fatty acids,

    however, one such mechanism has been proposed based on

    a study of cis-9-heptadecenoic acid, a fatty acid produced

    by the filamentous yeast Pseudozyma flocculosa exhibitinginhibitory activities towards several plant pathogenic fungi

    (Avis & Belanger, 2001). Antifungal fatty acids are believed

    to partition the lipid bilayers of fungal membranes resulting

    in loss of membrane integrity. Increased fluidity causes

    membrane permeability resulting in uncontrolled release

    of intracellular electrolytes and proteins, ultimately leading

    to cytoplasmic disintegration of fungal cells (Avis &

    Belanger, 2001).

    Proteinaceous compoundsStudies concerning antibacterial proteinaceous com-

    pounds, e.g. bacteriocins, are extensive in comparison to

    proteins with antifungal properties, although during the

    last decade various LAB-derived proteinaceous compoundswith anti-yeast and anti-mould abilities have been identi-

    fied (Codaet al., 2008; Rizzelloet al., 2011). Initial studies

    documented the loss of antifungal activity following treat-

    ment with proteolytic enzymes, while subsequent investi-

    gations have provided further characterization of such

    antifungal proteins. Studies have reported the production

    of antifungal proteinaceous compounds from species of

    Lactococcus, Streptococcus, Lactobacillus and

    Pediococcus with activity against a broad spectrum of

    food-associated fungi (Table 2). It is noteworthy that the

    Lactobacillus species are the most predominant isolates

    associated with such proteinaceous antifungal compounds

    (Table 2).

    Recent studies on sourdough lactobacilli have provided

    further evidence of bioactive antimycotic peptides. Fiveantifungal peptides were identified in water-soluble extracts

    of sourdough fermented with Lb. brevisAM7. Activity was

    observed towards P. roqueforti DPPMAF1 with MICs

    ranging between 3.5 and 8.2 mg ml1

    . An even lower

    MIC of 0.95 mg ml1 was obtained when two of the pep-

    tides were used in combination. One peptide was shown to

    be similar to the defensin-like protein found in pear. Further-

    more, two tripeptides were shown to correspond to anti-

    hypersensitive and antimicrobial peptides contained in ca-

    seins (Coda et al., 2008). An in-depth investigation of the

    water/salt soluble extracts from sourdough fermented with

    Lb. plantarum1A7 revealed the action of nine novel anti-

    fungal peptides having MICs between 2.5 and 10 mg ml1

    (Codaet al., 2011). One of these peptides showed homology

    to the lantibiotic lacticin 3147.Rizzelloet al. (2011)tested

    the antagonistic effects of methanol and water/salt soluble

    extracts from wheat germ sourdough, towards a variety of

    bakery moulds. The water/salt-soluble extracts contained

    four antifungal peptides with MICs between 2.5 and

    15.2 mg ml1

    , and sequence homology to antimicrobial

    and antifungal peptides. Finally, peptides targeting Asper-

    gillus japonicuswere found in extracts from sourdough fer-

    mented with Lb. rossiae LD108 and Lactobacillus

    paralimenariusPB127 (Garofaloet al., 2012). The LD108

    sourdough peptides were shown to correspond to proteolytic

    fragments from wheat a-gliadin.

    A further investigation into these antifungal peptides iscritical as their mode of action in fungal inhibition has

    yet to be elucidated.

    Miscellaneous antifungal compoundsRyan etal. (2011) reportedthe isolation of two nucleosides

    with antifungal activity from the culture filtrate ofLb. amylo-

    vorus DSM19280. Cytidine and2 0-deoxycytidine were iden-

    tified from a cocktail of 17 antifungal compoundsand possess

    MIC values > 200 mg ml1 againstA. fumigatusJ9.

    Lactones, produced by two Lb. plantarum isolates from

    beer and kimchi, have previously been demonstrated to

    elicit antibacterial and antiviral activities (Kishimoto,

    Sugihara, Mochida, & Fujita, 2005; Miyazawa et al.,

    2000), while they also exhibit antifungal activity. Anti-fungal lactones from LAB were first reported by Niku-

    Paavola et al. (1999) when mevanolactone showed to be

    produced by Lb. plantarum VTT E-78076. Yang, Kim,

    and Chang (2011)reported the purification ofd-dodecalac-

    tone produced by Lb. plantarum AF1 with associated MIC

    values that ranged from 350 to 6250mg ml1 against mem-

    bers of theAspergillusgenus as well asP. roqueforti. d-do-

    decalactone is associated with fruity aromas and may

    5S. Crowley et al. / Trends in Food Science & Technology xx (2013) 1e17

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    impart desirable organoleptic characteristics making it a

    preferred choice for food applications.

    Isolation, purification and identification of antifungalmetabolites

    Antifungal compounds of LAB have previously been

    described as complex in nature and indeed several studies

    have reported the difficulties encountered during the

    isolation process (Li, Liu, Zhang, Cui, & Lv, 2012;

    Magnusson & Schnurer, 2001; Niku-Paavol et al., 1999;

    Yang & Chang, 2010). For this reason, many studies merely

    report the antifungal activity and therefore the availability

    of data relating to the isolation of such compounds is

    limited. Another limitation of this work is that the com-

    pounds produced under laboratory conditions may differ

    from those produced in food matrices and, therefore, the

    Table 2. Proteinaceous antifungal compounds produced by LAB.

    LAB isolate(s) Protein responsible Activity spectrum Reference(s)

    Lc. lactissubsp. diacetylactisDRC1

    Peptide esensitive to pronase E andtrypsin

    A. flavus Batish, Grover, & Lal, 1989

    Lb. caseisubsp.pseudoplantarum

    (commercial silageinoculant)

    Peptide with antimycotoxigenicproperties esensitive to trypsin

    and a-chymotrypsin

    A. flavus Gourama & Bullerman, 1995

    Lb. caseiDSM 20312,Lb. caseiCCM1825

    Anitmycotoxigenic peptidessensitive to trypsin and pepsin

    P. citrinum, Penicilliumexpansum

    Gourama & Bullerman, 1997

    Lc. lactissubsp. lactisCHD-28.3

    Peptide esensitive to chymotrypsin,trypsin and pronase E

    A. flavusIARI, A. flavusNCIM555, Aspergillus parasiticusNCIM 898 and Fusariumspp.

    Roy, Batish, Grover, &Neelakantan, 1996

    Lb. pentosusTV35b Bacteriocin-like peptide pentocinTV35b, 3.9 kDa

    C. albicans Okkerset al., 1999

    Lb. coryniformisspp.coryniformisstrain Si3

    3 kDa, heat stable, active betweenpH 3.0-4.5

    Broad spectrum Magnusson & Schnurer, 2001

    Lb. paracaseisubsp.paracaseistrain M3

    43 kDa, hydrophobic bacteriocin C. albicansNBIMCC 72,Candida blankiiNBIMCC 85,Candida pseudointermediaNBIMCC 1532 strain SU

    Atanassova et al., 2003

    Lb. plantarumVLT01 Peptide esensitive to proteinase K,

    trypsin and protease

    Broad spectrum Colorettiet al., 2007

    Lb. plantarumCM8,W. confusaI5,Pediococcus pentosaceousR47,W. cibariaR16

    CFS sensitive to proteinase K Broad spectrum Rouseet al., 2008

    Lb. brevisAM7 Five antifungal peptides P. roquefortiDPPMAF1 Codaet al., 2008FiveLactobacillusstrains Peptide esensitive to pepsin,

    trypsin,a-chymotrypsin, andproteinase K

    PenicilliumM1 Voulgari et al., 2010

    Lb. brevisNCDC 02 Hydrophobic peptide between1 and 5 kDa in size

    Broad spectrum Falguni, Shilpa, & Mann, 2010

    Lb. brevisPS1 Peptide esensitive to proteinaseK and pronase E

    Fusariumspecies Mauchet al., 2010

    Lb. fermentumTe007,Ped. pentosaceousTe010

    Peptide esensitive to proteinase K A. niger Muhialdini et al., 2011

    Lb. plantarumNB and SDR Peptideesensitive to proteinase K Penicilliumsp. Zhao, 2011Lb. plantarum1A7 Nine sourdough peptides P. roquefortiDPPMAF1 Codaet al., 2011Lb. plantarumLB1 andLb. rossiaeLB5

    Four antifungal sourdough peptides P. roquefortiDPPMAF1 Rizzelloet al., 2011

    Lb. plantarumIMAU10014 Peptide esensitive to proteinase Kand trypsin

    P. roqueforti, A niger Wang et al., 2012

    Lb. sakeiKTU05-06,Ped. acidilacticiKTU05-7,Ped. pentosaceusKTU05-8,KTU05-9 and KTU05-10

    Bacteriocin-like inhibitorysubstances esakacin KTU05-6,pediocin KTU05-8 KTU05-9,KTU05-10 and AcKTU05-67

    Broad spectrum Digaitiene, Hansen, Juodeikiene,Eidukonyte, & Josephsen, 2012

    Lb. rossiaeLD108,Lb. paralimentariusPB127

    Sourdough peptides A. japonicus Garofaloet al., 2012

    Lactobacillus fermentumCRL 251

    Peptides esensitive to trypsin,

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    isolation of antifungal molecules should ideally be per-

    formed using the food matrix itself rather than from exper-

    imental media where possible. Advanced methodologies

    for the improved isolation and identification of antifungal

    compounds have resulted in an increase in the number of

    novel compounds identified over the last few years. The

    majority of extraction procedures enlist either liquideliquidextraction (LLE) or solid phase extraction (SPE), whereby

    the compounds of interest are retained in the organic frac-

    tion or sorbent of the column, respectively. Separation of

    the compounds is largely achieved using reverse phase

    HPLC (RP-HPLC) systems equipped with C18 columns to

    separate the components, while the final identification of

    the compounds usually employs NMR and MS.

    Lavermicocca et al. (2000) reported one of the first

    extraction procedures for antifungal metabolites derived

    from LAB. The inhibitory compounds from Lb. plantarum

    21B were isolated through a series of extraction steps. The

    CFS of the bacterium was firstly subjected to multiple LLE

    steps using ethyl acetate followed by thin layer chromatog-

    raphy (TLC) which was used for partial purification. The

    active fractions were subsequently identified through com-

    parison of standard sample spectra using GC/MS. LLE-

    based procedures have also been used as the first extraction

    step by a number of other groups working on the purifica-

    tion of antifungal compounds (Brosnanet al., 2012; Wang,

    Shen, Xiao, Zhou, & Dai, 2012; Wang, Yan, Wang, Zhang,

    & Qi, 2012) (Fig. 1).

    SPE combined with hydrophobic C18 column chroma-

    tography has been successfully used and widely applied

    for the isolation of antifungal compounds (Strom et al.,

    2002). A bioassay-guided isolation procedure was devised

    employing a microtitre well spore germination test for A.

    fumigatus J9. Sample preparation, separation and structureelucidation were all essential parameters considered in the

    aforementioned assay (Sjogren, 2005). Sample preparation

    involved the separation of the CFS of Lb. plantarum Mi-

    LAB 393 into hydrophilic and hydrophobic fractions on a

    SPE column. The pooled active hydrophobic fractions

    were then separated by RP-HPLC using a C18 column

    and an elution gradient of 5e100% acetonitrile, after which

    fractions were collected and bioassayed against the target

    organism. Active fractions were further fractionated using

    a Hypercarb porous graphitic column coupled to the

    bioassay, after which compound identification was per-

    formed through a combination of NMR, MS and GC.

    This extraction procedure has been used as the basis for a

    multitude of subsequent studies covering the isolation andidentification of anti-yeast and mould compounds from

    LAB with some variations including the introduction of re-

    cycling preparative HPLC to re-separate the fractions until

    a single peak is obtained (Fig. 2) (Dal Bello et al., 2007;

    Magnusson et al., 2003; Ryan et al., 2011; Schwenninger

    et al., 2008; Sjogren et al., 2003; Yang & Chang, 2010;

    Yanget al., 2011). An optimized method for the determina-

    tion of PLA in MRS broth has been devised (Armaforte,

    Carri, Ferri, & Caboni, 2006), based on a previously

    described method (Strom et al., 2002), which generated

    inconsistent yields caused by interactions between bacterial

    metabolites and the stationary phase of column resulting in

    unwanted retention of PLA on the column. The bacterial

    supernatant obtained by centrifugation was microfiltered

    and directly assessed by HPLC with a RP C18 column.All interfering components eluted at the beginning of a

    chromatographic run and PLA was then clearly separated,

    with high reproducibility and recovery rates reported

    (Armaforte et al., 2006).

    Antifungal peptides have recurrently been the subject

    of antifungal LAB reports and can be purified by a num-

    ber of methods. Okkers, Dicks, Silvester, Joubert, and

    Odendaal (1999) reported on the purification of a

    3.9 kDa antifungal peptide using ammonium sulphate pre-

    cipitation followed by cation-exchange chromatography

    using an Sulphopropyl (SP)-Sepharose column to obtain

    purified fractions. Concentrated culture broth from Lb.

    coryniformisSi3 was used as the starting material for pep-

    tide purification (Magnusson & Schnurer, 2001). The first

    step involved ion-exchange chromatography after which

    the active fractions were subjected to ammonium sulphate

    precipitation. Dissolved pellets were then applied to a gel

    filtration column to reveal the estimated size of the anti-

    fungal peptide. Anion exchange chromatography was

    used for the isolation of the proteinaceous antifungal

    compounds derived from Lactobacillus paracasei subsp.

    paracasei strain M3, where active fractions were then

    applied on a RP C4 column and further purified on a

    C18 HPLC system, followed by ESI-MS analysis

    (Atanassova et al., 2003). An alternative method was pre-

    sented by Coda et al. (2008) for the extraction of

    sourdough-derived peptides. Water soluble extracts werefirstly fractioned by ultrafiltration to separate the active

    fractions into various sizes according to the membrane

    cut-off. The active fractions were applied to reversed-

    phase fast-performance liquid chromatography (RP-

    FPLC) and fractions with antifungal activity were then

    separated by SDS-PAGE and identified by nano-LC-ESI-

    MS/MS. The identified peptides were synthesized and

    further investigated. This separation procedure was also

    used to isolate antifungal sourdough peptides in subse-

    quent studies (Coda et al., 2011; Rizzello et al., 2011).

    Most recently a rapid method for the detection of anti-

    fungal compounds from LAB was developed by Brosnan

    et al. (2012). Extracellular metabolites produced by anti-

    fungal LAB isolates were screened for the presence of anti-fungal compounds, and compared to known antifungal

    standards, by LC coupled with MS. Five isolates displaying

    strong inhibitory activities were thus screened and the ob-

    tained mass spec profiles were then compared to that of a

    panel of twenty five known antifungal metabolites,

    including PLA, vanillic acid and cytidine. Minimal prepa-

    ration was required as the samples were either filtered

    and directly injected into the system, or extracted using

    7S. Crowley et al. / Trends in Food Science & Technology xx (2013) 1e17

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    ethyl acetate prior to injection. Separation of the individual

    compounds was achieved through a Gemini C18 column,

    while identification was performed using the linear ion

    trap quadrupole (LTQ) Orbitrap hybrid Fourier transform

    mass spectrometer (FTMS). The developed method boastsa short analysis time of just 23 min, while it also eliminates

    the need for additional analytical methods, such as

    GCeMS and NMR, as the whole process can be performed

    in a single run. This innovative technique may assist food

    manufacturers in the rapid selection of antifungal LAB

    for application in various food fermentations, such as

    sourdough production, on the basis of specific antifungal

    compounds produced. Moreover this technique was sub-

    stantiated byGuo et al. (2011) to identify ten metabolites

    from the culture broth of Lb. reuteri ee1p targeting human

    pathogenic fungi such as Epidermophyton floccosum.

    Further promise has been afforded by Watrous et al.

    (2012), who developed a novel method enabling metabolic

    profiling of live colonies straight from a petri dish. Theantifungal effects ofPseudomonas sp. SH-C52 were deter-

    mined by applying this new approach combining nanospray

    desorption ESI-MS and alignment of MS data and molecu-

    lar networking. Thanamycin, the mediator of antifungal ac-

    tivity in Pseudomonas sp. SH-C52, was detected by this

    methodology where it had previously remained unidentified

    by other approaches. This molecule is produced transiently

    in small quantities emphasizing the sensitivity of this

    technique. Such a strategy may allow for the antifungal me-

    tabolites of LAB colonies to be discerned in a similar

    manner and represents a highly sensitive, real time, cost-

    effective identification method. Although the number of

    techniques has increased, consolidated methods need tobe established to improve the ease of purifying these

    compounds.

    Application of antifungal LAB as bio-control agents infood and feed systems

    An overview of the various food and feed applications of

    antifungal LAB is presented inTable 3. The global food in-

    dustrysectoris under constant pressure from both consumers

    and regulatory bodies to provide high quality fresh food with

    minimal processing. Consequently, research in recent years

    has significantly focused on the discovery of alternative stra-

    tegies to prevent food spoilage. Despite the physical and

    chemical barriers currently implemented to prevent food

    decay, the consumers preference for safe preservative-freeproducts, are increasing. The use of antifungal LAB to

    circumvent fungal spoilage has been studied in a multitude

    of food and feed settings encompassing fresh fruits and veg-

    etables, bakery, dairy products and silages. In situtesting is

    essential to substantiate the potential application of these

    generally regarded as safe (GRAS) organisms as bio-

    protectants against fungalrot andspoilage, as well as sensory

    and safety involvements. Indeed, various studies have

    Fig. 1. Chemical structures of various antifungal compounds produced by LAB.

    8 S. Crowley et al. / Trends in Food Science & Technology xx (2013) 1e17

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    demonstrated the successful application of LAB to alleviate

    fungal spoilage in various foods renderingthem feasible sub-

    stitutes or complements to chemical preservatives.

    Fruits & vegetablesFresh fruits and vegetables provide an opportune niche

    for many undesirable fungi due to high water availability

    and long term storage during transport, with Fusarium,

    Penicillium, Alternaria and Botrytis species, amongst

    others, identified as major fungal spoilers. Sathe, Nawani,

    Dhakephalkar, and Kapadnis (2007)demonstrated the abil-ity of Lb. plantarum CUK501 to inhibit growth of four

    different fungi on cucumbers for up to eight days compared

    to an untreated control. Penicillium spoilage was delayed

    on apples, pears, plums and grapes through the use ofPed-

    iococcus and Weisella isolates (Crowley, Mahony, & van

    Sinderen, 2012b; Lan, Chen, Wu, & Yanagida, 2012;

    Rouse, Harnett, Vaughan, & van Sinderen, 2008). The cul-

    ture filtrate of Lb. plantarum IMAU10014 was found to

    reduce Botrytis cinerea growth on tomato leaves (Wang,

    Shen, et al., 2012; Wang, Yan, et al., 2012). The most

    recent fruit application involved a mutant strain ofLb. plan-

    tarum IMAU10014 (Wang et al., 2013). An enhanced

    antifungal-producing strain (F3C2) was generated through

    genome shuffling and eliminated growth ofPenicillium dig-

    itatum KM08 on the surface of kumquats compared to the

    wild type (Table 3). The above reports support the use of

    antifungal LAB and/or their metabolites for the delay of

    fungal growth during transport and storage of fresh fruits

    and vegetables.

    Dairy productsDairy products, including cheeses and yoghurt, are also

    susceptible to fungal attack. LAB are routinely used as

    starter cultures in fermented dairy products and their ability

    to reduce fungal contamination has been demonstrated. Yo-

    ghurts have been primarily targeted as they are liable to

    yeast growth due to their low pH, storage at refrigerationtemperatures and presence of fruit in certain products. A

    co-culture ofLb. paracasei subsp.paracasei and Propioni-

    bacterium jensenii was found to retard growth of various

    Candida species in an in situ yoghurt model as well as on

    cheese surface (Schwenninger & Meile, 2004). Another

    study demonstrated that a selection of antifungal adjuncts

    such as Lactobacillus harbinensis K.V9.3.1Np and Lb.

    rhamnosus K.C8.3.1I exhibited protective properties

    against a number of fungi including Debaryomyces hanse-

    nii and Rhizopus mucilaginosa in yoghurts, while they did

    not alter the growth or acidification rates of the yoghurt

    starters, nor did they affect the pH, lactic or acetic acid

    levels (Delavenne, Ismail, Pawtowski, Mounier, &

    Barbier, 2012). Cheeses are also susceptible to spoilageby psychrotolerant moulds capable of withstanding low ox-

    ygen environments such as P. roqueforti. Three antifungal

    Lb. plantarum isolates demonstrated anti-mould capabil-

    ities when used as adjuncts during cheddar cheese produc-

    tion (Zhao, 2011). Furthermore, processed cheese slices

    and cheese shelf-life were improved after treatment with

    antifungal LAB (Garcha & Natt, 2011; Muhialdini,

    Hassan, Sadon, Zulkifli, & Azfari, 2011). Use of the

    Fig. 2. Flow diagram detailing the isolation and identification of anti-fungal compounds from LAB. 1. Antifungal metabolites derived fromculture supernatant can be separated using either LiquideLiquidExtraction or Solid Phase Extraction where the organic phase containshydrophobic compounds while the supernatant contains hydrophiliccompounds.2. Fractions are assessed by bioassay against a fungal in-

    dicator. 3. Active fractions are subsequently separated using HPLCwith column of choice and this process may be repeated several timesto further purify active fractions. 4. Eluted fractions are tested for anti-fungal activity again following chromatographic separation. 5. Thestructural details of the compound(s) that produce positive fractions

    are then identified through MS, NMR and/or GC.

    9S. Crowley et al. / Trends in Food Science & Technology xx (2013) 1e17

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    Table 3. Application of antifungal LAB as protectants in foods and feed.

    Food(s) examined Antifungal LAB Activity spectrum Reference

    Fruits & vegetablesCucumber Lb. plantarumCUK501 A. flavus, F. graminearum,

    Rhizopus stolonifer, Bt. cinereaSatheet al., 2007

    Corn Lb. plantarumPTCC 1058 A. flavus Khanafari, Soudi, &

    Miraboulfathi, 2007Apple Ped. pentosaceousR47 P. expansum Rouseet al., 2008Soybean Lb. plantarumAF1 A. flavus Yang & Chang, 2010Fresh mango Lb. acidilophidusNCDC 291 A. alternata Garcha & Natt, 2011Tomato leaves Lb. plantarumIMAU10014 Bt. cinerea Wang, Yan, et al., 2012Grape W. cibaria861006 Penicillium oxalicum Lanet al., 2012Pear, plum, grape Ped. pentosaceous54 P. expansum Crowleyet al., 2012bKumquat Lb. plantarumIMAU10014 strain

    F3A3 (mutant)P. digitatumKM08 Wanget al., 2013

    Dairy productsYoghurt, cheese Lb. paracaseisubsp. paracasei Candidaspecies Schwenninger & Meile, 2004Indian cheese Lb. acidilophidusNCDC 291 A. alternata Garcha & Natt, 2011Cheddar cheese Lb. plantarumNB, Lb. plantarum

    SDR andLb. plantarumDC2Penicilliumsp. Zhao, 2011

    Cheese slices Lb. fermentumTe007, Ped.pentosaceousTe010

    A. oryzae, A. niger Muhialdinet al., 2011

    Yoghurt Lb. harbinensisK.V9.3.1Np, Lb.rhamnosusK.C8.3.1I andLb.paracaseiK.C8.3.1Hc1

    D. hansenii, R. mucilaginosa, K.marxianus, K. lactis, Yarrowialipolytica, Penicilliumbrevicompactum

    Delavenne et al., 2012a

    Yoghurt Lb. plantarum16 (NCIMB41875)andLb. plantarum62(NCIMB41876)

    R. mucilaginosa Crowleyet al., 2012a

    BreadsSourdough Lb. plantarum21B A. nigerFTDC3227 Lavermicoccaet al., 2000Sourdough Lb. plantarum, Lb. caseiand Lb.

    fermentum

    a Fazeli, Shahverdi, Sedaghat,Jamalifar, & Samadi, 2004

    Gluten free bread,wheat bread

    Lb. plantarumFST 1.7 Fusariaspecies Dal Belloet al., 2007, Moore,Dal Bello, & Arendt, 2008

    Sourdough Lb. plantarumFST 1.7 & 1.9 A. niger, F. culmorum, P. expansum,P. roqueforti

    Ryan, Dal Bello, & Arendt, 2008

    Bread Lb. brevisAM7 P. roquefortiDPPMAF1 Codaet al., 2008Sourdough Lb. buchneriFUA 3525, and Lb.

    diolovoransDSM 14421A. clavatus, Cladisporiumspp.,Mortierellaspp., S. cervisiae, P.roqueforti

    Zhanget al., 2010

    Bread Lb. plantarumCRL 778 Penicilliumsp. Gerezet al., 2010Bread Lb. amylovorusDSM 19280 F. culmorumFST 4.05, A. niger

    FST4.21,P. expansumFST 4.22,P.roquefortiFST 4.11, bakery fungalflora

    Ryan et al., 2011

    Bread Lb. plantarum1A7 Penicillium, AspergillusandEurotiumspecies

    Codaet al., 2011

    Bread, panettone Lb. rossiaeLD108; Lb.paralimentariusPB127

    A. japoniucs Garofaloet al., 2012

    Wheat sourdough L. citreumH012 andW.koreensisH020

    P. roqueforti, A. niger Choi, Kim, Hwang, Kim, &Yoon, 2012

    Sangak (Traditionalflat bread)

    Lb. plantarumssp. plantarum,strain ATCC 20179, Lb.

    acidipholus,strain ATCC 20079andL. mesenteroidesssp.mesenteroides,strain 1591

    Moulds Najafi, Rezaei, Safari, &Razavi, 2012

    Bread Ped. acidilacticiKTU05-7, Ped.pentosaceousKTU05-8 andPed.pentosaceousKTU05-8

    Moulds Cizeikieneet al., 2013

    Sourdough Lb. hammesiiDSM 16381 A. niger, P. roqueforti,environmental contaminants

    Blacket al., 2013

    SilageBarley silage Lb. buchneri Yeasts Kung & Ranjit, 2001

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    aforementioned isolates provides manufacturers with a nat-

    ural option to the use of preservatives such as sodium ben-

    zoate, sorbic acids and natamycin in yoghurt and cheese

    production.

    Bakery productsPoor bread quality attributable to fungal growth has

    proven problematic for the food industry in terms of both

    economic and health costs for numerous years. An in-

    depth investigation of antifungal LAB sourdough starters

    has been performed with the majority of reports harnessing

    the antifungal properties of lactobacilli, in particular Lb.plantarum isolates, to enhance shelf-life and quality of

    the products (Table 3). The earliest documentation of the

    application of an antifungal LAB sourdough starter was

    the use of sourdough isolate Lb. plantarum 21B in a co-

    fermentation with Saccharomyces cerevisiae to retard the

    growth of A. niger FTDC3227 over a seven day storage

    period (Lavermicocca et al., 2000). However, no sensory

    analysis of the final product was conducted to assess the

    impact ofLb. plantarum21B on the organoleptic properties

    of the sourdough. Other Lb. plantarum isolates have all

    shown antifungal potential in bread fermentations (See

    Table 3). Additional Lactobacillus species have come to

    the fore as fungal inhibitors in bread production. The

    shelf-life of wheat bread containing Lb. amylovorus DSM

    19280 was improved, with inhibition observed against

    Aspergillus, Fusarium and Penicillium moulds. Recently

    Lb. rossiae LD108 and Lb. paralimentarius PB127 were

    used in the production of bread and panettone, and found

    to prevent growth ofA. japonicus with shelf lives ranging

    from 11 to 32 days as compared to bread prepared withbakers yeast dough (Garofaloet al., 2012). Antifungal ped-

    iococci have also proved successful in the control of mould

    growth in bread (Cizeikiene, Juodeikiene, Paskevicius, &

    Bartkiene, 2013). Pediococcus acidilactici KTU05-7, and

    Pediococcus pentosaceous KTU05-8 and KTU05-10 strains

    provided protection against mould development when

    sprayed on the surface of bread, a treatment that proved

    effective against a number of food related fungi such as

    Table 3 (continued)

    Food(s) examined Antifungal LAB Activity spectrum Reference

    Grass silage Lb. buchneri, Lb. plantarumandPed. pentosaceous

    Yeasts & moulds Driehuis et al., 2002

    Wheat silage,corn silage

    Lb. buchneriand Lb. plantarum Yeasts & moulds Weinberget al., 2002

    Corn silage Lb. buchneri40788 Yeasts Taylor & Kung, 2002Maize silage Lb. buchneri40788 Yeasts Ranjit, Taylor, & Kung, 2002Crimped wheatgrains

    Lb. buchneri Yeasts Adesogan, Salawu, Ross, Davies,and Brooks (2003)

    Corn silage Lb. buchneri Yeasts Nishinoet al., 2004Corn silage Lb. buchneri40788 andPed.

    pentosaceousR1094Yeasts Kleinschmit, Schmidt, &

    Kung, Jr., 2005Maize silage Lb. buchneri Yeasts Filya, Sucu, & Karabulut, 2006Grass silage Lb. plantarumMiLAB 393 and 14 Pichia anomala Broberg et al., 2007Corn silage Lb. buchneri40788 Moulds Kung, Schmidt, Ebling, &

    Hu, 2007Alfalfa silage Lb. buchneriand Lb. plantarum Yeasts Zhanget al., 2009Alfalfa silage Lb. bucnheriand Ped.

    pentosaceousYeasts & moulds Schmidt, Hu, Mills, &

    Kung, 2009Corn silage Lb. buchneri40788, Lb.

    plantarumand Ped. acidilacitiYeasts Reich & Kung, 2010

    Corn silage Lb. buchneriand Ped.

    pentosaceous

    Yeasts Schmidt & Kung, 2010

    Corn silage Lb. buchneriLN4637 andLb.buchneriLN40177

    Yeasts Tabacco, Piano, Revello-Chion,& Borreani, 2011

    Miscellaneous foodsFermented seaweedbeverage

    Lb. plantarumDW1 Unidentified yeasts Prachyakij et al., 2008

    Raw smoked sausage Lc. lactisssp. lactisK-205 and194

    Eurotium repens Stoyanova et al., 2010

    Raw poultry meat Lb. acidophilusNCDC 291 A. alternata Garcha & Natt, 2011Orange juice Lb. plantarum16 (NCIMB41875)

    and 62 (NCIMB41876)R. mucilaginosa Crowleyet al., 2012a

    Rice cakes Leuc. citreumC5, W. confusaHO24 and W. confusaD2-96

    Cadisporiumsp. YS1,Penicillium crustosumYS2,Neurosorasp. YS3

    Baeket al., 2012

    a Not specified.

    11S. Crowley et al. / Trends in Food Science & Technology xx (2013) 1e17

    Please cite this article in press as: Crowley, S., et al., Current perspectives on antifungal lactic acid bacteria as natural bio-preservatives, Trends in Food

    Science & Technology (2013), http://dx.doi.org/10.1016/j.tifs.2013.07.004

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    Fusarium culmorum Al-2 and Candida parapsilosis C.7.2.

    Co-fermentation of sourdough with Lactobacillus buchneri

    FUA 3525 and Lactobacillus diolovorans DSM 14421 de-

    ferred growth of a number of bread-spoiling fungi,

    including Aspergillus clavatus and Cladosporium spp.,

    through the accumulation of acetate and propionate

    (Zhang, Brandtb, Schwaba, & Ganzlea, 2010).

    Animal feedAnimal feed is also under threat of fungal decay during

    storage and feeding. Silage is the product of anaerobic

    fermentation of water soluble carbohydrates (WSC) to

    organic acids in forage crops, of which LAB play a domi-

    nating role (Schmidt & Kung, 2010). Oxygen may acciden-

    tally be introduced into silage during ensiling, storage and

    feeding, encouraging troublesome aerobic spoilers such as

    yeasts and moulds to proliferate, resulting in spoilage and

    decreased nutritive value, especially in hot climates

    (Kung, Taylor, Lynch, & Neylon, 2003; Taylor & Kung,

    2002). A plethora of investigations on the potentials of

    LAB as silage additives to produce high quality feeds

    have been performed with the majority of reports domi-

    nated by the application of the hetero-fermentative Lb.

    buchneri. The production of acetic acid and 1,2-

    propanediol during anaerobic degradation of lactic acid is

    an important factor in the preserving attributes ofLb. buch-

    neri (Oude Elferinket al., 2001). The aerobic stability of

    whole crop maize, maize, corn and barley silages has

    been improved with Lb. buchneri as a silage inoculant

    (See Table 3). The use of homo-fermentative LAB is

    important in the ensiling process as rapid lactic acid pro-

    duction from fermentation of WSC decreases pH, thereby

    improving forage preservation. However, preservation can

    be compromised as lactic acid can be oxidized by aerobicmicroorganisms and there is a reduced production in anti-

    fungal volatile fatty acids to prevent the growth of aerobic

    moulds and yeasts with this additive choice (Nishino,

    Wada, Yoshida, & Shiota, 2004; Reich & Kung, 2010;

    Weinberg et al., 2002). This drawback may be overcome

    by combining homo-fermentative LAB with Lb. buchneri

    and several reports have compared the use of Lb. buchneri

    alone and in combination with other LAB to improve silage

    quality, although conflicting results were documented. A

    combination approach was favoured by some authors

    (Driehuis, Oude Elferink, & Van Wikselaar, 2002; Reich

    & Kung, 2010; Zhang et al., 2009), while others preferred

    the sole use ofLb. buchnerito improve forage stability (Hu,

    Schmidt, McDonell, Klingerman, & Kung, 2009; Weinberget al., 2002). Lb. plantarum strains MiLAB 393 and Mi-

    LAB 14 were previously shown to have inhibitory activities

    towards a spectrum of fungi. Antifungal metabolites pro-

    duced by these isolates in cultured broth, such as 3-PLA

    and 3-hydroxydecanoic acid, were also identified in silage

    when used as inoculants. Furthermore additional antifungal

    components such as azealic acid were detected in silage in-

    oculants highlighting the potential for these strains in silage

    preservation (Broberget al., 2007). Lb. plantarum MiLAB

    393 has since been patented and used as a commercial

    silage inoculant known as Feedtech

    Silage F3000.

    Miscellaneous foodsAntifungal LAB have further promoted increased quality

    andshelf-life of a miscellany of other foods. Muhialdini etal.(2011)demonstrated the antagonistic effects of four LAB

    isolates againstA. nigerandAspergillus oryzae in tomato pu-

    ree. Beverages have also benefited from the application of

    antifungal LAB. The shelf-life of orange juice spiked with

    R. mucilaginosawas improved by the addition of the anti-

    fungalLb. plantarum16 (NCIMB41875) steep water isolate

    (Crowley, Mahony, & van Sinderen, 2012a), while a fer-

    mented seaweed beverage was found to contain a reduced

    yeast count after introduction of Lb. plantarum DW1

    (Prachyakij, Charernjiratrakul, & Kantachote, 2008). More

    recently Baek et al. (2012) demonstrated the potential of

    Leuc.citreumC5, W. confusa HO24 andW. confusa D2-96

    as antifungal rice cake starters. Limited applications of anti-

    fungal LAB in the preservation of meats exist. Interestingly,

    Lactobacillus acidilophidus NCDC 291 exerted a 0.4 log

    reduction in viable numbers ofAspergillus alternata when

    inoculated into raw poultry meat (Garcha & Natt, 2011).

    Additionally the shelf-life of raw smoked sausages was

    extended after application of twoLactococcus lactisssp. lac-

    tis strains K-205 and194 (Stoyanova, Ustyugova, Sultimova,

    & Bilanenko, 2010).

    Antifungal LABefungal interactionsWhile all the above-mentioned studies endorse the appli-

    cation of antifungal LAB, little information is available

    about the interactions of these antifungal metabolites and

    their target fungal species. Antifungal metabolite targetsites and modes of action are as of yet a poorly explored

    territory. In a bid to address this knowledge caveat, studies

    examining fungal protein expression as well as the physical

    effects of the antifungal metabolites on fungal development

    by microscopy represent the first attempt to gain an insight

    into these elusive interactions.

    One of the first studies to investigate antifungal LAB-

    efungal interactions was reported by Strom, Schnurer,

    and Melin (2005). A co-cultivation assay was devised using

    Lb. plantarumMiLAB 393 and its target Aspergillus nidu-

    lans. Physical changes during growth were examined

    microscopically, while changes in protein expression using

    2-D gels were also investigated. Reported morphological

    changes upon co-cultivation included interrupted mycelialbranching in addition to swollen hyphal tips. Three proteins

    were found to be differentially upregulated (designated Px,

    P1 and P11) and one protein, P2/K3, was thought to be

    shifted to an alternative location following exposure to

    the antifungal substances.

    Aside from proteomics, microscopy has also been

    exploited to study LABefungal interactions more recently.

    A macroconidia germination assay was monitored

    12 S. Crowley et al. / Trends in Food Science & Technology xx (2013) 1e17

    Please cite this article in press as: Crowley, S., et al., Current perspectives on antifungal lactic acid bacteria as natural bio-preservatives, Trends in Food

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    microscopically in order to determine what effects cCFS

    from a Lb. brevis PS1 culture had on F. culmorum growth

    (Mauch, Dal Bello, Coffey, & Arendt, 2010). It was noted

    that germ tube outgrowth was slightly delayed compared to

    a control upon treatment of conidia with 5% cCFS. Further-

    more germ tube formation was completely restricted after

    treatment with 10% cCFS. Similar findings were reportedby Guo et al. (2011), where conidia germination tests

    were also used to evaluate the impact of Lb. reuteri R2

    CFS on the dermatophyte Trichophytan tonsurans. The sus-

    pected mode of action of brevicin SG1 on C. albicans and

    P. citrinum fungal cells was also investigated (Adebayo &

    Aderiye, 2011). The effects of this bacteriocin on these two

    target organisms were examined by Transmitted Scanning

    Electron Microscopy (TSEM). Treatment of yeast cells re-

    sulted in reduced hyphal branching and irregular shaped

    cells. A dose-dependent response was observed whereby

    at lower concentrations (500 AU ml1) initiation of new

    hyphae failed to develop, while at 1000 AU ml1

    hyphal

    development was completely arrested withC. albicanscells

    exhibiting growth that was reminiscent of that of a budding

    yeast. The suspected mode of action on yeast cells was

    thought to be antibiosis and targeting the cell wall-

    synthesizing enzymes. SG1 induced morphological

    changes and decreased total biomass of P. citrinum.

    TSEM revealed swelling, lysis, damage to hyphae and total

    disruption of the cell wall. The mode of action was deemed

    to be both cytolytic and fungiolytic with the fungal wall

    presumed to be the primary target. In a recent paper Scan-

    ning Electron Microscopy (SEM) has revealed reduction in

    conidial size and undulation of the mycelial surface of

    Aspergillus parasiticus MTCC 2796 after exposure to the

    antifungal compound of Ped. acidilactici LAB 5 (Mandal,

    Sen, & Mandal, 2013). From the limited studies that haveattempted to elucidate how antifungal LAB impact on their

    sensitive fungi it appears that the primary target site of the

    antifungal compounds is the fungal cell wall, which is

    different from the previously held notion that the LAB-

    produced short chain fatty acids caused interference with

    membrane potential and leakage of membrane contents.

    While both mechanisms may be responsible for the anti-

    fungal effect, current data have not allowed a firm conclu-

    sion as regards to the reasons for strain/species-specific

    antifungal action of LAB and further studies may well

    reveal additional modes of action.

    A relatively unexplored approach to investigate the mo-

    lecular targets of the antifungal LAB-derived metabolites is

    by means of transcriptome analysis. Microarrays have beenemployed to study the transcriptional responses of a variety

    of fungi, such as Candida and Aspergillus species, to anti-

    fungal drugs (De Backer et al., 2001; Gautamet al., 2008).

    The genes most often affected appear to be those involved

    in ergosterol biosynthesis, the major sterol component in

    fungal plasma membranes. Azoles target the 14-a-deme-

    thylase enzyme, product of the CYP51, thus interfering

    with ergosterol biosynthesis (Ferreira et al., 2005).

    Transcriptional profiling of C. albicans in a co-culture

    with the probiotic strainsLb. rhamnosus GR-1 and Lb. reu-

    teri RC-14 was determined by Kohler, Assefa, and Reid

    (2012) in order to elucidate the molecular targets involved

    in probiotic interference. Upregulation of genes including

    those involved in lactic acid utilization, stress response

    and signalling was reported, while downregulation of,amongst others, genes associated with filamentous growth,

    cell wall organization and ergosterol biosynthesis provides

    an insight into the transcriptional response of this fungal

    pathogen. These strategies may also be applied to the un-

    derstanding of antifungal LABefungal interactions. Micro-

    array technology may thus provide an opportunity to

    elucidate which genes and associated metabolic or physio-

    logical functions of a given fungal spoiler are targeted by

    antifungal compounds, such as PLA and d-dodecalacetone.

    The so far published work performed on revealing such in-

    teractions between antifungal drugs and fungal pathogens

    provide an excellent basis for future work.

    Conclusions & future perspectivesVery significant advances in the field of antifungal LAB

    have been achieved during the last decade. However,

    certain limitations and knowledge gaps still need to be ad-

    dressed. Whilst there have been many publications on anti-

    fungal applications in recent years, just a small number of

    such studies have investigated final product quality,

    including sensory analysis. It is also interesting that very

    few commercial cultures are available, possibly due to the

    fact that the anti-fungal activity of any given strain is

    dependent on many physico-chemical parameters, the

    food production process and the ability of the strains to pro-

    duce the compounds in situ in the food product. The latter

    will be a prerequisite for a full assessment of antifungalLAB application in foods, as the inhibitory metabolites or

    their producing LAB may alter the visual and/or organo-

    leptic properties of the produced food. Safety concerns

    such as health effects are also important considerations

    which so far have not been addressed for all antifungal

    strains. Safety assessments should be included as a standard

    practice when characterizing an antifungal strain, as was

    done in the case of the antifungal strain Lb. plantarum

    DW3, for which an acute oral toxicity test was performed

    on mice, indicating that the isolate is safe for human con-

    sumption (Kantachote et al., 2010). Such assessments

    should include analysis of acquired antibiotic resistance

    and potential biogenic amine production in compliance

    with the EU qualified presumption of safety evaluation.Although in most instances sensory and safety assessments

    remain incomplete for a given antifungal strain, high-

    lighting the need for additional evidence to ensure the

    safety of implementing these compounds in food matrices,

    the mentioned antifungal LAB have become highly adapted

    to a range of environments as highlighted by their diverse

    in vivo and in vitro food applications. The development

    of more ready-to-use antifungal combinations such as the

    13S. Crowley et al. / Trends in Food Science & Technology xx (2013) 1e17

    Please cite this article in press as: Crowley, S., et al., Current perspectives on antifungal lactic acid bacteria as natural bio-preservatives, Trends in Food

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    antifungal slurry formulated by Gerez, Torino, Obregozo,

    and Font de Valdez (2010) would prove far more advanta-

    geous for the food manufacturer and provides an alternative

    approach to meeting consumer demands.

    Standardization of isolation and purification processes is

    required with procedures needing to be rapid, sensitive,

    reproducible, and cost effective (Fig. 3). The development

    of sensitive and rapid isolation procedures may ultimatelylead to the discovery of additional antifungal compounds.

    In time antifungal LAB may even replace chemical preser-

    vatives as bio-protectants in foods. As more genome se-

    quences become available transcriptomic approaches

    represent an amenable method to determine the molecular

    targets of antifungal metabolites derived from LAB. As

    of yet these targets are unknown and forthcoming studies

    should invest in microarray or other omics technologies

    to determine the effects of various LAB-produced anti-

    fungal compounds on fungi. Future efforts should also be

    oriented towards expanding our knowledge regarding the

    genetic mechanisms and metabolic pathways behind anti-

    fungal production (Fig. 3). Moreover, if the genetic machin-

    ery responsible for antifungal production is discerned thismay lead to the ability to transfer antifungal properties to

    starter cultures already routinely in use. Ultimately, the

    antifungal substances produced by LAB will need to be

    characterized to the same detailed extent as their antibacte-

    rial equivalents.

    AcknowledgementsS. Crowley is the recipient of a Lauritzson Foundation

    scholarship. D. van Sinderen is a recipient of a Science

    Foundation Ireland (SFI) Principal Investigator award

    (Ref. No. 08/IN.1/B1909).

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