30042015 9-12 Sept 15 Bioinformatics Workshop 2015

8/20/2019 30042015 9-12 Sept 15 Bioinformatics Workshop 2015

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NATIONAL BI

TRAINING

Septemb

Organi

Bioinformatin association with NXGenB

Department of Molecular Bi

College of Basic Sci

G. B. Pant University of

Pantnagar-263145,

Organizin

Coor

Dr. An

Profes

OrgDr. G

Co-oMr. Ash

INFORMATICS

PROGRAM

N

r 9 -12 , 2 0 15

zed by

cs Sub DICio Life Sciences, New Delhi

logy & Genetic Engineering

ences & Humanities

griculture & Technology

Uttarakhand, INDIA

Committee

dinator

il Kumar

or & Head

nizer har Taj

ganizer ani Mishra



This training programme will provide hands on pra

nd data analysis, interpretation through comput

ntering in this advanced area of In Silico Biology.

Ai

Objectives

To Acquaint the students/ faculty members and

and technologies in relation to agricultural produ

To design Hi-throughput experimentation wo

agricultural traits linked with agricultural produc

To Make the sense of big data, data analysis, inte programme.

To annotate high-throughput omics data for struc

understanding the complexity of system/traits.

To Visualize and study the interaction of biologi

defining problem related to agricultural producti

Course

Next Generation Sequencing: Introductio

Next Generation Technologies, Tools for NGS d

agriculture.

Transcriptomics: Introduction of transcript

data analysis, Computational tools/softwar

Applications of transcriptome data analysis in A

Proteomics: Phosphorylation site prediction

validation, Binding site prediction and analysi

proteomics data generated through wet lab experi

Metobolomics and Systems Biology: Int

metabolom analysis, Metabolic modeling, NetwMultiscale network analysis for biological insigh

ctical training on high-throughput omics technology

tional tools and also will be a starting point for

s

scientists about the importance of omics sciences

ctivity.

k-flow for understanding the molecular basis of

tivity.

rpretation and its application in crop improvement

tural and functional characterization for

al network and cascade for elucidating their role in

ity.

ontents

n of NGS, NGS data assembly methods, Popular

ta assembly and analysis, Application of NGS in

ome data, Different approaches of transcriptome

/server/databases for transcriptome analysis,

riculture.

, protein structure prediction, visualization and

, Protein-Protein interaction studies, Analysis of

mentations.

oduction to Metabolomics, Databases and tool for

rk-based analysis of plant-pathogen interactions.s in crop plants.



About the University

The G. B. Pant University of Agriculture and Technology is t

year 1960, on land grant pattern, with assistance from univ

introduce innovative and modern technologies in agricultural

in the country. Therefore, the Nobel Laureate Dr. Norman E

India. The university continues to play a pivotal role in int

university has been twice adjudged as the best state agricultur

Agricultural Research (ICAR).

Pantnagar Biotechnology Progra

Pantnagar Biotechnology Programme was established in 198

activities of biotechnology education and research at Pantna both for the development of technologies (R&D) and in

Biotechnology was initiated in 1988 with the kind support of

is continuously trying to evolve progressively with the diversi

Ph.D. program which has been offered as a inter-discipli

departments. Pantnagar Biotechnology programme has been

and its Master’s programme in Agricultural Biotechnology ha

by Department of Biotechnology (Govt. of India) New Del

research activities of Pantnagar Biotechnology programme is

such as signal transduction cascades for achieving disease res

the molecular basis of high nitrogen use efficiency, high grain

the programme also focus on plant disease surveillance pro

especially for economically important plant pathogens.

Bioinformatics Sub DIC

Bioinformatics Sub DIC was established in November 1998 in

College of Basic Sciences & Humanities and since then it is a

with teaching the center provides strong bioinformatics supp

general and molecular biology & biotechnology in particu

universities to pursue their research in various areas of bioinfo

softwares and facilities which are utilized in understanding c

and development of tools and useful databases etc.

NXGenBio Life SciencesNXGenBio Life Sciences based in New Delhi is the first com

provides services, solutions for high-throughput technology su

e first state agricultural university in the country established in the

rsity of Illinois. Right from its inception, it has strived hard to

research which has played a key role in ushering green revolution

. Borlaug recognized it as the harbinger of ‘Green revolution’ in

egration of teaching and research with extension activities. The

l university; in the years 1997 and 2006 by the Indian Council of

me

6 with an aim to serve as the nodal centre for coordinating the

ar. To meet the continuous demand for trained human resourcesthe production industry the Master’s program in Agricultural

Department of Biotechnology, Government of India. Since then it

ication of major biotechnologies. In 1995 the department initiated

ary program with curricular and faculty inputs from different

recognized as one of the Top-Ten Biotech schools in the country

s been adjusted twice as ‘A’ rank (11th and 12th prospective plan)

i. Through Programme Mode Support programme of DBT, the

focused on important key aspects of food and nutritional security

stance, Aroma biology and seed biology as well as to understand

calcium, iron and zinc accumulation and stress tolerance. Beside,

ramme employing newer tools of modern molecular diagnostics

the Dept. of Molecular Biology & Genetic Engineering (MBGE),

inherent part of the Pantnagar Biotechnology Programme. Along

rt to the ongoing research activities in the area of life sciences in

lar. The centre also provides support to the students of other

matics and complete their dissertations. The centre has state of art

mplex biological mechanisms such as protein-protein interaction,

any in India to launch Personal Genome Sequencing Services and

ch as NGS and GBS for crop plants and animals.



Level of participation

articipants should be teachers/scientists/academicians or P

nstitutes SAU/Basic Science Institutes/ Sate Governments/

How to reachantnagar is well connected to Delhi, Lucknow and other i

How to register

n order to register for the course, send the completed reg

ees Rs. 2000/- (without accommodation) in favor of C

ompetent authority to the Coordinator or In-charge, Bio

August 2015.

Duration & VenueThe duration of the course is for four days w.e.f. Sept. 9th

e Bioinformatics Sub DIC, Department of Molecular Biol

Last date of application submissio

10th August 2015

Accommodation

The arrangements for the stay for the participants will beExtra payment has to be done for this.

Number of participants

The maximum number of participants will be limited to

Note

Those who have personal laptop computer(s) are encoura

For college students permission letter from principal is cSelection will be based on first come first serve basis.

For details ple

of. Anil Kumar

oordinator Bioinformatics & Head

epartment of Molecular Biology &

enetic Engineeringollege of Basic Sciences & Humanities

B.P.U.A.T. , Pantnagar-263145

h. No. 05944-233898 Mobile: +91-9411195450

mail- [email protected]

h.D. students/Research fellow working in different ICAR

rivate Organizations.

portant cities by railways and bus route.

stration form along with demand draft (DD) as registration

omptroller, GBPUA&T, Pantnagar, duly forwarded by the

informatics. Selected candidates will be emailed by 20th

2015 to Sept. 12th 2015 and the venue of the course would

gy & Genetic Engineering, CBSH Pantnagar .

ade in university guest house only on request in advance.

5.

ed to bring during training.

mpulsory.

ase contact

Dr. Gohar Taj

Scientist I/c Bioinformatics & Organizer

Department of Molecular Biology &

Genetic EngineeringCollege of Basic Sciences & Humanities

G.B.P.U.A.T. , Pantnagar-263145

Ph. No. 05944-233287



Name : Prof/Dr./Mr./Ms.)

Sex : MALE FEMA

Designation:

Organization:

Address for communication:

Email:

Mobile Number:

Accommodation Required : Yes

Mode of Payment : Cash

DD No. DD Dat

Date:

Signature & Seal of deputing Au

Have a personal laptop to bring

Motivation for attending trainin

E

No

DD

e:

Applicant Signature

hority

or training: Yes No

(2 lines):

Documents

30042015 9-12 Sept 15 Bioinformatics Workshop 2015