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NATIONAL BI
TRAINING
Septemb
Organi
Bioinformatin association with NXGenB
Department of Molecular Bi
College of Basic Sci
G. B. Pant University of
Pantnagar-263145,
Organizin
Coor
Dr. An
Profes
OrgDr. G
Co-oMr. Ash
INFORMATICS
PROGRAM
N
r 9 -12 , 2 0 15
zed by
cs Sub DICio Life Sciences, New Delhi
logy & Genetic Engineering
ences & Humanities
griculture & Technology
Uttarakhand, INDIA
Committee
dinator
il Kumar
or & Head
nizer har Taj
ganizer ani Mishra
8/20/2019 30042015 9-12 Sept 15 Bioinformatics Workshop 2015
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This training programme will provide hands on pra
nd data analysis, interpretation through comput
ntering in this advanced area of In Silico Biology.
Ai
Objectives
To Acquaint the students/ faculty members and
and technologies in relation to agricultural produ
To design Hi-throughput experimentation wo
agricultural traits linked with agricultural produc
To Make the sense of big data, data analysis, inte programme.
To annotate high-throughput omics data for struc
understanding the complexity of system/traits.
To Visualize and study the interaction of biologi
defining problem related to agricultural producti
Course
Next Generation Sequencing: Introductio
Next Generation Technologies, Tools for NGS d
agriculture.
Transcriptomics: Introduction of transcript
data analysis, Computational tools/softwar
Applications of transcriptome data analysis in A
Proteomics: Phosphorylation site prediction
validation, Binding site prediction and analysi
proteomics data generated through wet lab experi
Metobolomics and Systems Biology: Int
metabolom analysis, Metabolic modeling, NetwMultiscale network analysis for biological insigh
ctical training on high-throughput omics technology
tional tools and also will be a starting point for
s
scientists about the importance of omics sciences
ctivity.
k-flow for understanding the molecular basis of
tivity.
rpretation and its application in crop improvement
tural and functional characterization for
al network and cascade for elucidating their role in
ity.
ontents
n of NGS, NGS data assembly methods, Popular
ta assembly and analysis, Application of NGS in
ome data, Different approaches of transcriptome
/server/databases for transcriptome analysis,
riculture.
, protein structure prediction, visualization and
, Protein-Protein interaction studies, Analysis of
mentations.
oduction to Metabolomics, Databases and tool for
rk-based analysis of plant-pathogen interactions.s in crop plants.
8/20/2019 30042015 9-12 Sept 15 Bioinformatics Workshop 2015
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About the University
The G. B. Pant University of Agriculture and Technology is t
year 1960, on land grant pattern, with assistance from univ
introduce innovative and modern technologies in agricultural
in the country. Therefore, the Nobel Laureate Dr. Norman E
India. The university continues to play a pivotal role in int
university has been twice adjudged as the best state agricultur
Agricultural Research (ICAR).
Pantnagar Biotechnology Progra
Pantnagar Biotechnology Programme was established in 198
activities of biotechnology education and research at Pantna both for the development of technologies (R&D) and in
Biotechnology was initiated in 1988 with the kind support of
is continuously trying to evolve progressively with the diversi
Ph.D. program which has been offered as a inter-discipli
departments. Pantnagar Biotechnology programme has been
and its Master’s programme in Agricultural Biotechnology ha
by Department of Biotechnology (Govt. of India) New Del
research activities of Pantnagar Biotechnology programme is
such as signal transduction cascades for achieving disease res
the molecular basis of high nitrogen use efficiency, high grain
the programme also focus on plant disease surveillance pro
especially for economically important plant pathogens.
Bioinformatics Sub DIC
Bioinformatics Sub DIC was established in November 1998 in
College of Basic Sciences & Humanities and since then it is a
with teaching the center provides strong bioinformatics supp
general and molecular biology & biotechnology in particu
universities to pursue their research in various areas of bioinfo
softwares and facilities which are utilized in understanding c
and development of tools and useful databases etc.
NXGenBio Life SciencesNXGenBio Life Sciences based in New Delhi is the first com
provides services, solutions for high-throughput technology su
e first state agricultural university in the country established in the
rsity of Illinois. Right from its inception, it has strived hard to
research which has played a key role in ushering green revolution
. Borlaug recognized it as the harbinger of ‘Green revolution’ in
egration of teaching and research with extension activities. The
l university; in the years 1997 and 2006 by the Indian Council of
me
6 with an aim to serve as the nodal centre for coordinating the
ar. To meet the continuous demand for trained human resourcesthe production industry the Master’s program in Agricultural
Department of Biotechnology, Government of India. Since then it
ication of major biotechnologies. In 1995 the department initiated
ary program with curricular and faculty inputs from different
recognized as one of the Top-Ten Biotech schools in the country
s been adjusted twice as ‘A’ rank (11th and 12th prospective plan)
i. Through Programme Mode Support programme of DBT, the
focused on important key aspects of food and nutritional security
stance, Aroma biology and seed biology as well as to understand
calcium, iron and zinc accumulation and stress tolerance. Beside,
ramme employing newer tools of modern molecular diagnostics
the Dept. of Molecular Biology & Genetic Engineering (MBGE),
inherent part of the Pantnagar Biotechnology Programme. Along
rt to the ongoing research activities in the area of life sciences in
lar. The centre also provides support to the students of other
matics and complete their dissertations. The centre has state of art
mplex biological mechanisms such as protein-protein interaction,
any in India to launch Personal Genome Sequencing Services and
ch as NGS and GBS for crop plants and animals.
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Level of participation
articipants should be teachers/scientists/academicians or P
nstitutes SAU/Basic Science Institutes/ Sate Governments/
How to reachantnagar is well connected to Delhi, Lucknow and other i
How to register
n order to register for the course, send the completed reg
ees Rs. 2000/- (without accommodation) in favor of C
ompetent authority to the Coordinator or In-charge, Bio
August 2015.
Duration & VenueThe duration of the course is for four days w.e.f. Sept. 9th
e Bioinformatics Sub DIC, Department of Molecular Biol
Last date of application submissio
10th August 2015
Accommodation
The arrangements for the stay for the participants will beExtra payment has to be done for this.
Number of participants
The maximum number of participants will be limited to
Note
Those who have personal laptop computer(s) are encoura
For college students permission letter from principal is cSelection will be based on first come first serve basis.
For details ple
of. Anil Kumar
oordinator Bioinformatics & Head
epartment of Molecular Biology &
enetic Engineeringollege of Basic Sciences & Humanities
B.P.U.A.T. , Pantnagar-263145
h. No. 05944-233898 Mobile: +91-9411195450
mail- [email protected]
h.D. students/Research fellow working in different ICAR
rivate Organizations.
portant cities by railways and bus route.
stration form along with demand draft (DD) as registration
omptroller, GBPUA&T, Pantnagar, duly forwarded by the
informatics. Selected candidates will be emailed by 20th
2015 to Sept. 12th 2015 and the venue of the course would
gy & Genetic Engineering, CBSH Pantnagar .
ade in university guest house only on request in advance.
5.
ed to bring during training.
mpulsory.
ase contact
Dr. Gohar Taj
Scientist I/c Bioinformatics & Organizer
Department of Molecular Biology &
Genetic EngineeringCollege of Basic Sciences & Humanities
G.B.P.U.A.T. , Pantnagar-263145
Ph. No. 05944-233287
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Name : Prof/Dr./Mr./Ms.)
Sex : MALE FEMA
Designation:
Organization:
Address for communication:
Email:
Mobile Number:
Accommodation Required : Yes
Mode of Payment : Cash
DD No. DD Dat
Date:
Signature & Seal of deputing Au
Have a personal laptop to bring
Motivation for attending trainin
E
No
DD
e:
Applicant Signature
hority
or training: Yes No
(2 lines):