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1 112 223 334 445 556 667 778 889 10001111122213331444 0 20 40 60 80 h706 (control) 1 115 229 343 457 571 685 799 913 1027114112551369 0 20 40 60 80 100 120 h88 depth 10k bin 1 112 223 334 445 556 667 778 889 10001111122213331444 0 20 40 60 80 h225 depth 10k bin 1 112 223 334 445 556 667 778 889 10001111122213331444 0 10 20 30 40 50 60 70 h144 depth 10k bin Supplementary Figure 1. Comparison of genomes missing dpy-5 and/or unc-13 markers. A. The distribution of EMS mutations are plotted along the length of chromosome I. The genomes missing markers have more EMS mutation in the first 7Mbp of chromosome I when compared to a control genome (h706). B. The average read depth per 10Kbp of coding element is plotted along the length of chromosome I. The x-axis shows the coordinate in 10K units. The y-axis shows the number of reads. The control genome show 33% more reads in the first 7Mbp while the genome with missing markers shows a flat distribution.

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1 97 193 289 385 481 577 673 769 865 961 105711531249134514410

102030405060708090

h706 (control)

1 100 199 298 397 496 595 694 793 892 991 10901189128813870

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h88 depth

10k bin

1 97 193 289 385 481 577 673 769 865 961 105711531249134514410

1020304050607080

h225 depth

10k bin

1 97 193 289 385 481 577 673 769 865 961 105711531249134514410

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h144 depth

10k bin

Supplementary Figure 1. Comparison of genomes missing dpy-5 and/or unc-13 markers. A. The distribution of EMS mutations are plotted along the length of chromosome I. The genomes missing markers have more EMS mutation in the first 7Mbp of chromosome I when compared to a control genome (h706). B. The average read depth per 10Kbp of coding element is plotted along the length of chromosome I. The x-axis shows the coordinate in 10K units. The y-axis shows the number of reads. The control genome show 33% more reads in the first 7Mbp while the genome with missing markers shows a flat distribution.