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11th GBIF Global NODES Meeting
Incentivising and Strategising Publishing of Biodiversity Data
Vishwas ChavanSenior Programme Officer for Digitisation and Mobilisation of Primary Biodiversity DataGlobal Biodiversity Information Facility (GBIF)
1 October 2011
Impediments to data publishing
Lack of IncentivesLack of Incentives
Absence of datapublishing strategies
Absence of datapublishing strategies
3 incentives3 incentives
3 strategies3 strategies
3 incentives for data publishing
GBIF Data Publishing Framework Task
Group
GBIF Data Publishing Framework Task
Group
Incentive 1: Data Paper
What it is: Scholarly publication of searchable metadata document describing a dataset, or a group of datasets
What it is: Scholarly publication of searchable metadata document describing a dataset, or a group of datasets
Provide scholarly credit to data publishers
through citable journal publications
Describe the data in a structured
human-readable form
Promote and publicize existence of data
Source: Chavan and Penev (in press). Data Paper: A mechanism to incentivise data publishing in biodiversity science. BMC Bioinformatics (special supplement), in press
Incentive 1: Data PaperWorkflowWorkflow
Integrated Publishing Toolkit (IPT) v. 2.0.2
facilitate authoring of metadata and auto-
generation of Data Paper manuscript
Integrated Publishing Toolkit (IPT) v. 2.0.2
facilitate authoring of metadata and auto-
generation of Data Paper manuscript
Incentive 2: Data Citation“Data citation standards can form the basis for increased incentives, recognition, and rewards for scientific data activities. Unfortunately, such standards and good practices are lacking”
CODATA Data Citation Task Group
“Data citation standards can form the basis for increased incentives, recognition, and rewards for scientific data activities. Unfortunately, such standards and good practices are lacking”
CODATA Data Citation Task GroupPlease cite this data as follows: (accessed through GBIF data portal, Mammal specimens, http://data.gbif.org/datasets/resource/559)(accessed through GBIF data portal, Vertebrate specimens, http://data.gbif.org/datasets/resource/541)(accessed through GBIF data portal, Natural History Museum Rotterdam, http://data.gbif.org/datasets/resource/693)(accessed through GBIF data portal, Database Schema for UC Davis Wildlife museum, http://data.gbif.org/datasets/resource/736)......................................................................
Please cite this data as follows: (accessed through GBIF data portal, Mammal specimens, http://data.gbif.org/datasets/resource/559)(accessed through GBIF data portal, Vertebrate specimens, http://data.gbif.org/datasets/resource/541)(accessed through GBIF data portal, Natural History Museum Rotterdam, http://data.gbif.org/datasets/resource/693)(accessed through GBIF data portal, Database Schema for UC Davis Wildlife museum, http://data.gbif.org/datasets/resource/736)......................................................................
Incentive 2: Data Citation
for publishers
for publishers
We need metrics!We need metrics!
for datasets
for datasets
for contributors
for contributors
for role of contributorsfor role of
contributors
for release & updatesfor release & updates
for data volumefor data volume
for access location
for access location
Smithsonian National Museum of Natural History (2002 -), Museum Collection Records: Mammals. 579257 records. Contributed by Helgen KM (Principal Investigator, curator, author), Gordon LK (manager, author, curator), Peurach SC (author, manager), Potter CW (manager, author), Carleton MD (curator), Maldonado JE (author, developer), Wilson DE (curator, author), Thorington Jr RW (curator, author, validator), Ludwig CA (manager, developer, author), Lunde DP (author). Published online, http://collections.nmnh.si.edu/search/mammals/, first released on 12/02/2002, last updated on 15/09/2010, doi:17.3377/smi.8.57.965.
Smithsonian National Museum of Natural History (2002 -), Museum Collection Records: Mammals. 579257 records. Contributed by Helgen KM (Principal Investigator, curator, author), Gordon LK (manager, author, curator), Peurach SC (author, manager), Potter CW (manager, author), Carleton MD (curator), Maldonado JE (author, developer), Wilson DE (curator, author), Thorington Jr RW (curator, author, validator), Ludwig CA (manager, developer, author), Lunde DP (author). Published online, http://collections.nmnh.si.edu/search/mammals/, first released on 12/02/2002, last updated on 15/09/2010, doi:17.3377/smi.8.57.965.
Please cite this data as follows: (accessed through GBIF data portal, Mammal specimens, http://data.gbif.org/datasets/resource/559)(accessed through GBIF data portal, Vertebrate specimens, http://data.gbif.org/datasets/resource/541)(accessed through GBIF data portal, Natural History Museum Rotterdam, http://data.gbif.org/datasets/resource/693)(accessed through GBIF data portal, Database Schema for UC Davis Wildlife museum, http://data.gbif.org/datasets/resource/736)......................................................................
Please cite this data as follows: (accessed through GBIF data portal, Mammal specimens, http://data.gbif.org/datasets/resource/559)(accessed through GBIF data portal, Vertebrate specimens, http://data.gbif.org/datasets/resource/541)(accessed through GBIF data portal, Natural History Museum Rotterdam, http://data.gbif.org/datasets/resource/693)(accessed through GBIF data portal, Database Schema for UC Davis Wildlife museum, http://data.gbif.org/datasets/resource/736)......................................................................
Today
Today
2012-13
2012-13
Incentive 2: Data Citation
Incentive 3: Data Usage
Data Usage Index (DUI)
Data Usage Index (DUI)
What it is: The Data Usage Index is a measure of the impact of data publishing by being accessed and used by the stakeholder communities
What it is: The Data Usage Index is a measure of the impact of data publishing by being accessed and used by the stakeholder communities
Source: Chavan and Ingwersen (2009) Towards a data publishing framework for primary biodiversity data: challenges and potentials for the biodiversity informatics community. BMC Bioinformatics, 10 (Sppl 14): S2
Incentive 3: Data Usage
Source: Ingwersen and Chavan (in press). Indicators for Data Usage Index (DUI): An incentive for publishing primary biodiversity data through the global information infrastructure. BMC Bioinformatics (special supplement).
DUI is computed on the basis of 14 biodiversity data usage indicators
DUI is computed on the basis of 14 biodiversity data usage indicators
publisherspublishers
countrycountry
datasetsdatasets
thematic data
thematic data
DUI for..DUI for..
3 strategies for data publishing
Strategies and action plans
Strategies and action plans
Broadening data types & publisher
communities
Broadening data types & publisher
communities
Strengthening InfrastructureStrengthening Infrastructure
Strategy 1: Action Plans
It is essential for countries to have a biodiversity data discovery and
mobilization strategy in alignment with their overall national biodiversity strategy & action plan (NBSAP)
It is essential for countries to have a biodiversity data discovery and
mobilization strategy in alignment with their overall national biodiversity strategy & action plan (NBSAP)
“However, we currently lack best practice guidelines on how to develop demand-driven strategies and action plans”
Berents et.al., 2010
“However, we currently lack best practice guidelines on how to develop demand-driven strategies and action plans”
Berents et.al., 2010
Source: Berents, Hamer and Chavan (2011). Towards demand-driven publishing: Approaches to the prioritisation of digitization of natural history collections data. Biodiversity Informatics, 7(2): 113-119.
Strategy 2: Action Plans
Content Needs Assessment
December 2011
Data Gap Analysis
December 2011
Comprehensive dialog with Participants to develop data publishing strategy & action plan
Comprehensive dialog with Participants to develop data publishing strategy & action plan
Interactions with BIG institutions to ensure uptake of GSAP-NHC recommendations
Interactions with BIG institutions to ensure uptake of GSAP-NHC recommendations
Strategy 2: Expanding
Audubon CoreMultimedia Resources
Metadata Schema
Audubon CoreMultimedia Resources
Metadata Schema
Norway – IndiaIPBES Capacity Building
Pilot Project
Norway – IndiaIPBES Capacity Building
Pilot Project
Camera trap dataCamera trap data
developed
applied in
Strategy 2: Expanding
EIA practitionersEIA practitioners
Local GovernmentsLocal Governments
Freshwater biodiversityFreshwater biodiversity
Invasive Alien Species
Invasive Alien Species
Strategy 3: InfrastructureData Hosting Infrastructure: rescuing data at risk
Data Hosting Infrastructure: rescuing data at risk
GBIF Best Practice Guide on establishing and operationalising data hosting centre
GBIF Best Practice Guide on establishing and operationalising data hosting centre
20122012
In summary
3 Incentives
Strategy & Action PlansBroadening data types & publisher communitiesStrengthening infrastructure
Strategy & Action PlansBroadening data types & publisher communitiesStrengthening infrastructure
Data PaperData CitationData Usage Index
Data PaperData CitationData Usage Index
3 Strategies
How to mainstream Data Paper?How to mainstream Data Paper?
How do we strategise data publishing?How do we strategise data publishing?
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