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Agreement between the white matter connectivity based tensor-based
morphometry and the volumetric white matter parcellations
16 Nov 2011 Wed, 08:00~08:15
Seung-Goo KIMDepartment of Brain and Cognitive Sciences,
Seoul National University, Korea (ROK)
Nanosymposium: Data Analysis and Statistics
ACKNOWLEDGEMENT
• Hyekyoung Lee @ SNU
• Moo K. Chung, Jamie L. Hanson, Richard J. Davidson, Seth D. Pollak @ U Wisconsin-Madison
• Brain B. Avants, James C. Gee @ U Penn
Connectivity based on correlation• Correlation of functional measures
i j
scan 2scan 1
i j
scan 3
i j
Connectivity based on correlation• Correlation of functional measures
i j
scan 2scan 1
i j
scan 3
i j
Connectivity based on correlation• Correlation of functional measures
i j i j
subject 1 subject 2
i j
subject 3
• Correlation of anatomical measures
i j
scan 2scan 1
i j
scan 3
i j
White matter connectivity
• Cortical thickness is only defined along the cortical surface, thus the connectivity within the white matter cannot be known.
White matter connectivity
• Cortical thickness is only defined along the cortical surface, thus the connectivity within the white matter cannot be known.
• We can build the white matter connectivity using tensor-based morphometry (TBM) that quantifies local volume at all voxels.
Kim et al., 2011, IEEE International Symposium on Biomedical Imaging (ISBI), pp. 808-811.
TBM-based networks
OBJECTIVES
• Agreements between TBM-based networks and DTI-based connectivity
• Differences between a clinical group and a normal control group using TBM-based networks
Subjects & images• PI (Post-Institutionalized) subjects
• 32 children who experienced maltreatment in the early stages of life (<2 yr-old) in orphanages and were adopted later
• NC (Normal Control) subjects
• 33 age & gender matched children
• T1-weighted MRIs (3 Tesla; 1mm3 voxel)
• Non-linear normalization by ANTS (U Penn)
Partial correlation
• To factor out age and gender, first fit a GLM JD = β0 + β1 · age+ β2 · gender+ noise
Partial correlation
• To factor out age and gender, first fit a GLM JD = β0 + β1 · age+ β2 · gender+ noise
r = JD− (�β0 + �β1 · age+ �β2 · gender)• Take residuals of the fit from the observation
Partial correlation
• To factor out age and gender, first fit a GLM JD = β0 + β1 · age+ β2 · gender+ noise
r = JD− (�β0 + �β1 · age+ �β2 · gender)• Take residuals of the fit from the observation
• Pearson’s correlation between the residuals is the partial correlation
Xmn =
�i∈Cm,j∈Cn
corr(i, j)
Number of pairs
WITHIN- vs. BETWEEN-[Xmn] ∈ R48×48
m = n
Diagonal element in
C3
[Xmn]
m �= n
C3C4
Off-diagonal element in [Xmn]
Xmn =
�i∈Cm,j∈Cn
corr(i, j)
Number of pairs
WITHIN- vs. BETWEEN-[Xmn] ∈ R48×48
m = n
Diagonal element in
C3
[Xmn]
m �= n
C3C4
Off-diagonal element in [Xmn]
WITHIN-connectivity
Xmn =
�i∈Cm,j∈Cn
corr(i, j)
Number of pairs
WITHIN- vs. BETWEEN-[Xmn] ∈ R48×48
m = n
Diagonal element in
C3
[Xmn]
m �= n
C3C4
Off-diagonal element in [Xmn]
WITHIN-connectivity
BETWEEN-connectivity
Xmn =
�i∈Cm,j∈Cn
corr(i, j)
Number of pairs
WITHIN- vs. BETWEEN-[Xmn] ∈ R48×48
m = n
Diagonal element in
C3
[Xmn]
m �= n
C3C4
Off-diagonal element in [Xmn]
WITHIN-connectivity
BETWEEN-connectivity
Xmn =
�i∈Cm,j∈Cn
corr(i, j)
Number of pairs
WITHIN- vs. BETWEEN-[Xmn] ∈ R48×48
m = n
Diagonal element in
C3
[Xmn]
m �= n
C3C4
Off-diagonal element in [Xmn]
WITHIN-connectivity
BETWEEN-connectivity
>>
Statistical inferences
• Jackknifing on NC and PI
• 500 random networks as null models against brain networks
• Willcoxon rank sum test is used
NC vs. PI: local inference
PI<NC PI>NCGCC: Genu of corpus callosum EC-R: External capsule, right
SCR-L: Superior corona radiata, left FX/ST-R: Fornix / Stria terminalis, right
SCP-L: Superior cerebellar peduncle, left
Conclusions
• The greater within-connectivity than between-connectivity in brain networks shows agreement between TBM-based network and DTI-based atlas.
Conclusions
• The greater within-connectivity than between-connectivity in brain networks shows agreement between TBM-based network and DTI-based atlas.
• Locally differences in within-connectivity may imply altered white matter integrity due to early maltreatment