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Practical 1 Organization Introduction to clinical genetics and cytogenetics Microscopes

Practical 1 07

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  • 1. Practical 1 Organization Introduction to clinical genetics and cytogenetics Microscopes
  • 2. Fill the presence cards
    • Put down your name, family name, number of your group, your home address and address in Prague.
    • In the vacant space join your mobile phone number or e-mail address.
    • The card will be used for registration of your presence, test results and exams.
  • 3. Organization
  • 4. Institute of biology and medical genetics
    • Dr. Eduard Korek, Vra Tmov
    • [email_address]
    • My phone (Motol hospital): 224 435 980
    • Mrs. Tmov : 257 296 151
    • Secretary of the institute Motol hospital, Pediatric clinic, 4 th floor part G
  • 5. Practical in medical biology
    • is organized in the building of theoretical and preclinical institutes (Plzesk) in the lecture room of the Institute of biology
    • Don't be late, please!
    • No breaks during practicals.
  • 6. Requirements for getting a credit
    • Maximum two unjustified absences
      • Further absence could be tolerated only under serious reasons and with relevant certificate.
      • Lack of discipline or lack of basic knowledge can result in suspension from the practical and unjustified absence.
      • Any type of absence lead to lack of points due to a missed test.
    • Minimum 80% of maximal possible yield for the tests
      • In most of practicals students will take a written test.
      • Irrespective of the number of question in the test, students will be able to obtain maximum 10 points for each test.
      • The point yields will be summed up at the end of the
      • Maximum five extra points could be obtained for an oral presentation.
    • Presence in the credit practical no absences are allowed
  • 7. Students not fulfilling requirements
    • will be subjected to a oral test in the last practical or on another occasion ( after negotiation with examiner )
    • In case of failure student can repeat this oral test for two times.
    • Students without credit will not be allowed to continue in studies in the second year.
  • 8. Recommended textbooks
    • Passarge E.: Color Atlas of Genetics. Georg Thieme Verlag, Stuttgart New York, 1995
    • Mange E. J., Mange A. P.: Basic Human Genetics. Sinauer Associates Inc., Sunderland, Massachusetts, 1999
    • Nussbaum R. L., McInnes R. R., Willard H. F.: Thompson & Thompson Genetics in Medicine. W.B.Saunders Company, Philadelphia, Pennsylvania, 2001
  • 9. Since the next week my presentations will be available on www:
    • http://camelot2.lf2.cuni.cz/turnovec/ublg/vyuka/
  • 10. Please fill the sheets on your tables.
  • 11. Introduction to clinical genetics and cytogenetics
  • 12. Origin of the genetically conditioned disorder DNA RNA protein Phenotype (trait, feature) Change in the DNA sequence, chromosomal aberrations Change in the gene expression, synthesis of abnormal RNA molecule Change of enzyme activity, defects of the cell and tissue structure Change of function and structure of organs, inborn metabolic errors, developmental defects mutation
  • 13. Medical examinations of genetic disorders. patient family genealogic examination chromosomes cytogenetic examination DNA molecular biological examination
  • 14. The basis of the cytogenetic examination is chromosomal analysis.
  • 15. Chromosome short (p-) arm long (q-) arm centromere chromatid telomere telomere repetitive (satellite) sequence DNA repetitive sequence (TTAGGG) n repetitive sequence (TTAGGG) n DNA
  • 16. Telomeres of human chromosomes
  • 17. Chromosome X chromatid DNA synthesis (replication) DNA chromosome 1 chromatid = 1 DNA molecule
  • 18. Types of chromosomes metacentric (mediocentric) submetacentric ( sub mediocentric) acrocentric telocentric satellites (don't confuse with satellite DNA)
  • 19. Staining and observation of chromosomes, microscopes
  • 20. Task 1: Name all parts of the microscope indicated on the picture . 1 2 4 5 6 3 eyepiece objective lens stag e condenser coarse adjustment fine adjustment
  • 21. Stereomicroscope
  • 22. Stereomicroscopes equipped with cold light sources
  • 23. Measuring of microscopic objects in the optical microscope (eyepiece scale, micrometer)
  • 24. Objective scale
  • 25. Measuring of microscopic objects (blood elements) in the optical microscope
  • 26. Staining of chromosomes
    • Giemsa-Romanowski (Wright stain)
    • Hematoxylin
    • Acetocarmin
    • Acetoorcein
    • Fuchsin Feulgen's reaction
  • 27. Giemsa staining (= solid or conventional staining) leucocytes chromosomes
  • 28. Task 2: Observation of human chromosomes
    • The slides were obtained from human peripheral blood lymphocytes.
    • The blood was cultivated in the medium. Under cultivation conditions cell division was induc ed.
    • The cell suspension was fixed a dropped onto slides and then stained with Giemsa-Romanowski solution.
  • 29. Observation of chromosomes
    • Observe the slide under low magnification (objective 4x or 10x).
    • Find chromosome spread (a group of chromosomes representing nucleus of one cell) and observe it under higher magnification (40 or 45x). Be careful when focusing the slide must not be broken!
    • Compare the microscopic observation with adjacent picture of chromosomes. Try to determine the total number of chromosomes in a human somatic cell.
  • 30. Task 3 (see the picture of chromosomes): The picture shows human chromosomes stained by the Giemsa method (such called solid staining). A) Which chromosomes you can observe in the picture: one-chromatid or double-chromatid? B) Determine types of chromosomes. C) How much chromosomes are present in a human somatic cell?
  • 31. large metacentric small metacentric large acrocentric small acrocentric t he rest submetacentric chromosomes
  • 32. 14 8 10 14 14 + 8 + 14 + 10 = 46 Total number of chromosomes: 46
  • 33. Fluorescent microscope Principal of fluorescence: excitation of electron
  • 34. Scheme of fluorescent microscope mercury burner filter slide observation
  • 35. Fluorochromes in genetics
    • DAPI (4',6-diamidino-2-phenylindole)
    • PI (propidium iodide)
    • Quinacrine
    • Ethidium bromide
  • 36. See you next week!