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BlueBRIDGE receives funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 675680 www.bluebridge-vres.eu
How ICES uses BlueBRIDGE tools to overcome our challenges
Scott LargeInternational Council for the Exploration of the Sea (ICES)[email protected]
ContextICES provides advice on the sustainable use of living marine resources and protection of the marine environment.• Single stock fishing opportunities
• 263 fish stocks across the northeast Atlantic• Ecosystem Overviews• Fishery Overviews
"Understanding how ecosystems of EU e-Infrastructures can boost Blue Growth", 11 January 2017, Brussels
ContextIncreasing need for high powered computing for the provisioning of ICES advice:• Ecosystem models• Mixed-fisheries models• Single-stock forecasts• Management strategy evaluation
"Understanding how ecosystems of EU e-Infrastructures can boost Blue Growth", 11 January 2017, Brussels
Current approach
Model
Model output
Input data
Survey
Commercial
ScriptDATRAS
InterCatch
"Understanding how ecosystems of EU e-Infrastructures can boost Blue Growth", 11 January 2017, Brussels
Challenges
Current approach:• Code is designed for each stock• Code is not separable from
input and output• Not fully transparent,
reproducible, or collaborative
Desired approach:• Flexible and integrated• Available as-a-service• Provenance management• Collaborative• ICES Transparent Assessment
Framework (test deployment 2017) taf.ices.dk
Script ScriptInput Output
"Understanding how ecosystems of EU e-Infrastructures can boost Blue Growth", 11 January 2017, Brussels
"Understanding how ecosystems of EU e-Infrastructures can boost Blue Growth", 11 January 2017, Brussels
Modified functionsMSE
Ecosystem Model
Single stock model
e-Infrastructure
Parallelize, increase efficiencies,
and harmonize
Modified the routineScript Script Modified
functions
Script Modified
functions
e-infrastructure
ScriptInput Output
"Understanding how ecosystems of EU e-Infrastructures can boost Blue Growth", 11 January 2017, Brussels
In practiceScript Modified
functions
e-infrastructure
"Understanding how ecosystems of EU e-Infrastructures can boost Blue Growth", 11 January 2017, Brussels
BlueBRIDGE benefitsIntegrating R environment with BlueBRIDGE e-infrastructure has many advantages:• Flexible and integrated• Available as-a-service• Provenance management• Collaborative• Reduces overhead for scientists to fully comply with service
and generalization requirements• Enables extant R scripts to be easily modified to utilize
BlueBRIDGE e-infrastructure
"Understanding how ecosystems of EU e-Infrastructures can boost Blue Growth", 11 January 2017, Brussels
ImpactIntegrating local computing environment with e-infrastructure enables users to remain in a familiar space, while still having access to services that make e-infrastructures so attractive and useful.
ICES Community - simple for scientists to use and allows focus to remain on our scientific development instead of technological complexity
"Understanding how ecosystems of EU e-Infrastructures can boost Blue Growth", 11 January 2017, Brussels
Thank YouQuestions?
