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Principles of Genetics
Book: Snustad and Simmons, 4th ed.(new edition)
Professor: John C. Larkin
Contact Information:
John C. Larkin
Office: 316 Life Sciences
Office Hours: Wed. 10:00am-12:00am
Phone: 578-8552
Email: [email protected]
Teaching Assistants:
See syllabus for your TA and locationof your Discussion Section
Discussion Sections (“Labs”)
Discussion of homework problems
Quizzes
Turn in homework
Discussion sections will meet this week!
Grading:
Two lecture exams 200 points
Final exam (Comprehensive!) 100 points
Homework (best 5 of 6) 50 points
Quizzes (best 5 of 6) 50 points400 points
Make-up Exam:
The third exam is an in class make-up exam for students who missed an exam due to anexcused absence. There will be no other make-up exams. The make-up may not substitute for the final.
Students may also take the make-up exam to replace a lecture exam score but in this case the make-up exam must count toward the final grade.
Homework
Problems 2.4, 2.5, 2.9, 2.10, 2.11, 2.12, 2.13, 2.15.
Due: Wednesday, Jan 23 (Sec 5,6,7 &10)
or Friday, January 25 (Sec 8,9,11,12)
(Along with additional problems).
Incarceration rate by gender(from http://www.ojp.usdoj.gov/bjs/prisons.htm):
Men are ten times as likely as women to be in prison.
But, incarceration rate is increasing faster among women than among men(from 2003 to 2004, 2.9% increase forwomen, 2.0% increase for men).
Genetics: The Science of
InheritanceGenotype(Inherited traits)
Environment
Phenotype(Actual characteristicsof organism)
Genetic Variation in Chickens
Gold-lacedWyandotte
BlackWyandotte
White-crested Polands
Genetically-engineered resistance to the European Corn Borer
Fig. 1.14
Structure of Eukaryotic Cells
Fig. 2.2
DNA is found in:
Nucleus
Mitochondria and chloroplasts
Mito. and chloro. derived from prokaryotic symbionts
Fig. 1.4
DNA Structure (Simplified)
Hydrogen-bonded base-pairs (G-C, A-T)
Covalently-bonded sequence of base-pairs(deoxyribose-phosphodiester backbone)
Functions of DNA:
Replication (preserves genetic information)
Gene expression (information in genes expressed as proteinfor cell functions)
(Fig. 1.6)
DNA replication depends on base-pairingand preserves the sequence of bases
Gene Expression:
The process by which genes affect the phenotype.
Converts sequence of nucleotides to sequence of amino acids in a protein,via transcription and translation.
Human beta-globin gene expression
FIG.1.7
Protein Structure and Function
. The amino acid sequence of a protein determines its structure and function.
Much of an organism’s phenotype results from protein function.
Example: Hemoglobin carries O2 and CO2 in the blood
Consequences of mutation
Changes in the DNA sequence of agene (mutations) change the sequence of the encoded protein.
Therefore, mutations can alter proteinstructure and function.
Example: Hemoglobin sickle-cellmutation.
Mutations in genes change proteinsand phenotypes
Normal gene
Normal protein
Normalphenotype
Mutant gene
Mutant protein
Mutantphenotype
Mitosis and Meiosis
The Cell Cycle
Mitosis: Purpose is to preserve chromosome number.
Meiosis: Purpose is to create haploid gametes, and to create new genotype combinations.
Replication of a chromosome during mitosis (in a diploid)
Diploid cell
Replicatedchromosomes
Chr. #preserved
Meiosis
Four haploid gametes
Meiosis
Diploid cell
Human Life Cycle
Mitosismakes mytoes
Meiosismakes my gametes
(From Campbell)
The Cell Cycle (Fig. 2.4)
G1
S
G2
Mitosis &cytokinesis
Structure of a replicated chromosome
Counting chromosomes and chromatids
• n = haploid number of chromosomes– Example: the humans have 23 different
chromosomes (n=23).– Diploid cells have 2n chromosome #.
Human diploid cells, have 46 chromosomes (2n=46).
• c = number of chromatids in unreplicated (G1) haploid state.
Replication of a chromosome in a diploid (n=1) during mitosis (see
Fig.2.10)
G1
S
G2
Aftercytokinesis
Both daughter cells still diploid!
2n 2c
2n 4c
2n 2c
Stages of mitosis (Fig. 2.6)
Stages of mitosis
Note!
At metaphase in mitosis, all chromosomes line up individually on the metaphase plate, and the chromatids separate and move toopposite poles as independentchromosomes.
MeiosisFig. 2.11
Meiosis overview: Meiosis I• Prophase of Meiosis I is longer than
mitotic prophase.• In Metaphase I, the two copies of each
replicated chromosome pair at the metaphase plate (a tetrad), unlike mitosis.
• In Anaphase I, each chromosome moves to pole without chromatid separation.
• At the end of Meiosis I, the chromosome # has been reduced, but each chromosome still has two chromatids.
Meiosis overview: Meiosis II
• The chromosomes are not replicated in the interphase between Meiosis I & Meiosis II.
• The chromatids finally separate in Anaphase II.
• The final result is four haploid gametes, each with half the number of chromosomes present in the diploid cells.
Chromosomes in Meiosis(in a diploid, see Fig. 2.10)
2n,2c
2n,4c
1n,2c
1n,2c
Meiosis I:Reductiondivision
Tetrad
Two copies ofsamechromosome
Meiosis, continued
1n,2c
1n,2c
Meiosis II
Four haploid gametes, all1n, 1c.
Fig. 2.14. Crossingover
Occurs during prophase I
Chiasma (pl. chiasmata)indicate where chromosomes have exchanged geneticmaterial.
Crossing over (Recombination)
Synapsis(pairing)
Prophase I
Metaphase I
Genes in Meiosis
Meiosis I:Reductiondivision
Two copies ofchromosome,with -globin alleles
H hLet H= normal -globin
Let h=sickle cell-globin
Meiosis, continued
Meiosis II
Four haploid gametes, 2 H and 2 h
H H h h
Fig 3.1
Let D = tall
Let d = dwarf
P
F1
F2
D_ = DD or Dd
DD dd
Dd
787 Tall (D_ )
277 Dwarf (dd)
Mendel’s Initial Observations from Monohybrid Cross
• The dwarf trait is hidden in the F1, but reappears unchanged in the F2. This contradicts “blending inheritance”.
• In the F2, tall and dwarf plants appear in a ratio of about 3 tall : 1 dwarf.
Mendel’s Conclusions
• Each trait is controlled by an inherited factor, now called a “gene”.
• Two copies of each gene are present in the organism. These copies are called “alleles”.
• The alleles are usually transmitted unchanged through crosses.
Fig. 3.2. Symbolic representation of Mendel’s cross
PunnettSquare
Mendel’s Principles
• Principle of Dominance: In a heterozygote, one allele may conceal another.
• Principle of Segregation: In a heterozygote, the alleles segregate from each other during gamete formation.
Molecular basis of Mendel’s cross
• Gibberellin (GA) is a plant growth hormone, synthesized by specific enzymes.
• Dwarf plants (dd homozygotes) have a mutation a gene that codes for a GA biosynthesis enzyme.
• Tall plants have at least one functional copy of the enzyme.