166
Dan Chitwood Donald Danforth Plant Science Center Science on Tap Schlafly Bottleworks May 27, 2015 What beer bottles & violins say about the evolutionary forces that shape us & our culture leaves

What leaves and violins say about the evolutionary forces that shape us and our culture

Embed Size (px)

Citation preview

  1. 1. Dan Chitwood Donald Danforth Plant Science Center Science on Tap Schlafly Bottleworks May 27, 2015 What beer bottles & violins say about the evolutionary forces that shape us & our culture leaves
  2. 2. What shapes can tell us: The evolution of violin shape Leaves as composites of hidden shapes A framework for quantifying lifes complexity Outline Claes et al., 2014
  3. 3. How to put a number on shape? An example, using violins
  4. 4. Photos from auction: >9,000 instruments >400 violin makers >400 years of history Chitwood (2014) Imitation, genetic lineages, and time influenced the morphological evolution of the violin. PLOS ONE
  5. 5. How to measure shape:
  6. 6. Shape = { xn, yn } How to measure shape: Coordinates, landmarks, pseudo-landmarks
  7. 7. How to measure shape: Chain code
  8. 8. How to measure shape: Chain code
  9. 9. How to measure shape: Chain code
  10. 10. How to measure shape: Chain code 0 1 2 3 4 5 6 7
  11. 11. How to measure shape: Chain code 0 1 2 3 4 5 6 7
  12. 12. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0
  13. 13. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0
  14. 14. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0
  15. 15. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7
  16. 16. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0
  17. 17. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6
  18. 18. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0
  19. 19. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6
  20. 20. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6
  21. 21. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6
  22. 22. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6
  23. 23. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6
  24. 24. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6
  25. 25. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6
  26. 26. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4
  27. 27. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6
  28. 28. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6
  29. 29. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6
  30. 30. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6
  31. 31. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6
  32. 32. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0
  33. 33. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0
  34. 34. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6
  35. 35. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6
  36. 36. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6
  37. 37. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7
  38. 38. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6
  39. 39. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6
  40. 40. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5
  41. 41. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6
  42. 42. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6
  43. 43. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4
  44. 44. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6
  45. 45. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4
  46. 46. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4
  47. 47. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6
  48. 48. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4
  49. 49. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4
  50. 50. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4
  51. 51. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4
  52. 52. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4
  53. 53. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4
  54. 54. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3
  55. 55. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3 4
  56. 56. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3 4 3
  57. 57. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3 4 3 3
  58. 58. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3 4 3 3 3
  59. 59. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3 4 3 3 3 2
  60. 60. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3 4 3 3 3 2 2
  61. 61. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3 4 3 3 3 2 2 2
  62. 62. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3 4 3 3 3 2 2 2 2
  63. 63. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3 4 3 3 3 2 2 2 2 0
  64. 64. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3 4 3 3 3 2 2 2 2 0 2
  65. 65. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3 4 3 3 3 2 2 2 2 0 2 2
  66. 66. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3 4 3 3 3 2 2 2 2 0 2 2 2
  67. 67. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3 4 3 3 3 2 2 2 2 0 2 2 2 0
  68. 68. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3 4 3 3 3 2 2 2 2 0 2 2 2 0 0
  69. 69. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3 4 3 3 3 2 2 2 2 0 2 2 2 0 0 2
  70. 70. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3 4 3 3 3 2 2 2 2 0 2 2 2 0 0 2 2
  71. 71. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3 4 3 3 3 2 2 2 2 0 2 2 2 0 0 2 2 2
  72. 72. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3 4 3 3 3 2 2 2 2 0 2 2 2 0 0 2 2 2 2
  73. 73. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3 4 3 3 3 2 2 2 2 0 2 2 2 0 0 2 2 2 2 2
  74. 74. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3 4 3 3 3 2 2 2 2 0 2 2 2 0 0 2 2 2 2 2 3
  75. 75. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3 4 3 3 3 2 2 2 2 0 2 2 2 0 0 2 2 2 2 2 3 2
  76. 76. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3 4 3 3 3 2 2 2 2 0 2 2 2 0 0 2 2 2 2 2 3 2 2
  77. 77. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3 4 3 3 3 2 2 2 2 0 2 2 2 0 0 2 2 2 2 2 3 2 2 2
  78. 78. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3 4 3 3 3 2 2 2 2 0 2 2 2 0 0 2 2 2 2 2 3 2 2 2 2
  79. 79. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3 4 3 3 3 2 2 2 2 0 2 2 2 0 0 2 2 2 2 2 3 2 2 2 2 2
  80. 80. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3 4 3 3 3 2 2 2 2 0 2 2 2 0 0 2 2 2 2 2 3 2 2 2 2 2 2
  81. 81. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3 4 3 3 3 2 2 2 2 0 2 2 2 0 0 2 2 2 2 2 3 2 2 2 2 2 2 0
  82. 82. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3 4 3 3 3 2 2 2 2 0 2 2 2 0 0 2 2 2 2 2 3 2 2 2 2 2 2 0 2
  83. 83. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3 4 3 3 3 2 2 2 2 0 2 2 2 0 0 2 2 2 2 2 3 2 2 2 2 2 2 0 2 0
  84. 84. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3 4 3 3 3 2 2 2 2 0 2 2 2 0 0 2 2 2 2 2 3 2 2 2 2 2 2 0 2 0 1
  85. 85. How to measure shape: Chain code 0 1 2 3 4 5 6 7 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3 4 3 3 3 2 2 2 2 0 2 2 2 0 0 2 2 2 2 2 3 2 2 2 2 2 2 0 2 0 1 0
  86. 86. How to measure shape: Chain code 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3 4 3 3 3 2 2 2 2 0 2 2 2 0 0 2 2 2 2 2 3 2 2 2 2 2 2 0 2 0 1 0 Shape = { } Chain code is lossless: perfect reconstruction from compressed data
  87. 87. How to measure shape: Chain code + Fourier = Elliptical Fourier Descriptors Graphic: Christine Daniloff
  88. 88. How to measure shape: Chain code + Fourier = Elliptical Fourier Descriptors Graphic: Christine Daniloff Graphic: Cardiff University Graphic: Workshop Mizzotti
  89. 89. How to measure shape: Chain code + Fourier = Elliptical Fourier Descriptors Kuhl and Giardina Computer Graphics & Image Processing (1982)
  90. 90. How to measure shape: Chain code + Fourier = Elliptical Fourier Descriptors Kuhl and Giardina Computer Graphics & Image Processing (1982)
  91. 91. How to measure shape: Chain code + Fourier = Elliptical Fourier Descriptors 0 0 0 7 0 6 0 6 6 6 6 6 6 6 4 6 6 6 6 6 0 0 6 6 6 7 6 6 5 6 6 4 6 4 4 6 4 4 4 4 4 4 3 4 3 3 3 2 2 2 2 0 2 2 2 0 0 2 2 2 2 2 3 2 2 2 2 2 2 0 2 0 1 0 Shape = { }
  92. 92. How to measure shape: Chain code + Fourier = Elliptical Fourier Descriptors a1, a2, a3 an b1, b2, b3 bn c1, c2, c3 cn d1, d2, d3 dn Shape = { } Harmonic coefficients:
  93. 93. -1.0 -0.5 0.0 0.5 1.0 -1.0 -0.5 0.0 0.5 1.0 z4941_1 # harmonics 2 4 8 16 32 64 How to measure shape: Chain code + Fourier = Elliptical Fourier Descriptors
  94. 94. Deviations along the outline Points sampled along the outline Deviation(in%ofthecentroidsize) 30 60 90 120 0.050.100.150.200.25 # harmonics 2 4 8 16 32 64 How to measure shape: Chain code + Fourier = Elliptical Fourier Descriptors
  95. 95. An aside about beer bottles . . .
  96. 96. brahma caney chymay corona deusventrue duvel franziskaner grimbergen guiness hoegardeen jupiler kingfisher latrappe lindemanskriek nicechouffe pecheresse sierranevada tanglefoot tauro westmalle amrut ballantines bushmills chivas dalmore famousgrouse glendronach glenmorangie highlandpark jackdaniels jb johnniewalker magallan makersmark oban oldpotrero redbreast tamdhu wildturkey yoichi An aside, appropriate for tonight: a shape is a shape Differentiating beer from whiskey bottles Momocs, Vincent Bonhomme
  97. 97. An aside, appropriate for tonight: a shape is a shape Differentiating beer from whiskey bottles Momocs, Vincent Bonhomme
  98. 98. An aside, appropriate for tonight: a shape is a shape Differentiating beer from whiskey bottles Momocs, Vincent Bonhomme
  99. 99. Back to violins . . .
  100. 100. The morphological evolution of violins: The effects of time, space, & people on violin shape
  101. 101. The morphological evolution of violins: The effects of time, space, & people on violin shape
  102. 102. The morphological evolution of violins: Why does shape correlate with time? Violin makers?
  103. 103. The New York Times
  104. 104. But the Stradivarius shape doesnt necessarily produce a superior instrument. Is shape just a viral meme? Fritz et al. PNAS (2012, 2014)
  105. 105. Sometimes shapes are functional, but can still vary in non-functional ways Nia et al., Royal Society Proc A (2015)
  106. 106. Sometimes shapes are functional, but can still vary in non-functional ways Nia et al., Royal Society Proc A (2015)
  107. 107. The morphological evolution of violins: Does violin shape have a genetic basis?
  108. 108. House Gagliano: Giuseppe (Joseph) Gennaro (Januarius) Nicol Ferdinando ** * *
  109. 109. * House Testore: Carlo Giuseppe Carlo Antonio *
  110. 110. House Degani: Giulio Eugenio **
  111. 111. House Guarneri: Giuseppe (del Ges) Giuseppe (filius Andrea) Pietro (of Venice) Pietro (of Mantua) Andrea * * * * *
  112. 112. What shapes can tell us: The evolution of violin shape Leaves as composites of hidden shapes A framework for quantifying lifes complexity Outline Claes et al., 2014
  113. 113. foodgps.com Fantasia, Disney
  114. 114. Landmark-based Procrustes analysis: Superimposed homologous coordinates
  115. 115. Landmark-based Procrustes analysis: Superimposed homologous coordinates Kerschbaumer and Sturmbauer (2011) International Journal of Evol. Biol.
  116. 116. Landmark-based Procrustes analysis: Superimposed homologous coordinates Kerschbaumer and Sturmbauer (2011) International Journal of Evol. Biol. Translate
  117. 117. Landmark-based Procrustes analysis: Superimposed homologous coordinates Kerschbaumer and Sturmbauer (2011) International Journal of Evol. Biol. Translate Scale
  118. 118. Landmark-based Procrustes analysis: Superimposed homologous coordinates Kerschbaumer and Sturmbauer (2011) International Journal of Evol. Biol. Translate Scale Rotate
  119. 119. Species effects
  120. 120. Husbands et al., 2009 Developmental stage: Unequal expansion
  121. 121. Stephen Hales, Vegetable staticks, 1727 Developmental stage: Unequal expansion
  122. 122. Stephen Hales, Vegetable staticks, 1727 Developmental stage: Unequal expansion
  123. 123. Stephen Hales, Vegetable staticks, 1727 Developmental stage: Unequal expansion
  124. 124. Stephen Hales, Vegetable staticks, 1727 Developmental stage: Unequal expansion
  125. 125. Chitwood and Sinha, 2015 Leaf number: Plants produce different leaf types
  126. 126. Chitwood and Sinha, 2015 Leaf number: Plants produce different leaf types While walking in the Public Gardens of Palermo, it came to me in a flash that in the organ of the plant which we are accustomed to call the leaf lies the true Proteus who can hide or reveal himself in vegetal forms. From first to last, the plant is nothing but leaf. Goethe
  127. 127. Forster and Bonser, Ann Bot 2009 Leaf number: Plants produce different leaf types Acacia
  128. 128. Forster and Bonser, Ann Bot 2009 Leaf number: Plants produce different leaf types Lancewood
  129. 129. Species, developmental stage, & leaf number effects
  130. 130. Species, developmental stage, & leaf number effects
  131. 131. Species, developmental stage, & leaf number effects Shoot base Shoot tip
  132. 132. Species, developmental stage, & leaf number effects L1 L2 L1 L3 L4 L5 L6 L7 L8 L9 L10 Shoot base Shoot tip Leaf Number, different leaf types
  133. 133. Species, developmental stage, & leaf number effects S1S2S9S10 S3S4S5S6S7S8 L1 L2 L1 L3 L4 L5 L6 L7 L8 L9 L10 Developmental Stage, unequal expansion Leaf Number, different leaf types Shoot base Shoot tip
  134. 134. Species, developmental stage, & leaf number effects Shoot base Shoot tip Leaf number Developmental stage Unequal expansion Different leaf types
  135. 135. Species, developmental stage, & leaf number effects Shoot base Shoot tip Leaf number Developmental stage Unequal expansion Different leaf types
  136. 136. Species, developmental stage, & leaf number effects Shoot base Shoot tip Leaf number Developmental stage Unequal expansion Different leaf types
  137. 137. http://www.joyofdata.de/public/pca-3d/ Dealing with multivariate information Principal Component Analysis
  138. 138. Evolutionary vs. developmental paths in the Vitis leaf morphospace Species effects
  139. 139. Evolutionary vs. developmental paths in the Vitis leaf morphospace Developmental stage Unequal expansion
  140. 140. Evolutionary vs. developmental paths in the Vitis leaf morphospace Leaf number Different leaf types
  141. 141. Heterochrony (changes in timing) underlies our own evolutionary past as well finstofeet.com
  142. 142. What shapes can tell us: The evolution of violin shape Leaves as composites of hidden shapes A framework for quantifying lifes complexity Outline Claes et al., 2014
  143. 143. Complex phenotypes are challenging, but are likely the most meaningful Klingenberg Lab There is grandeur in this view of life, with its several powers, having been originally breathed into a few forms or into one; and that, whilst this planet has gone cycling on according to the fixed law of gravity, from so simple a beginning endless forms most beautiful and most wonderful have been, and are being, evolved. Darwin
  144. 144. Complex phenotypes are challenging, but are likely the most meaningful Schmieder et al., (2015) PLOS ONE There is grandeur in this view of life, with its several powers, having been originally breathed into a few forms or into one; and that, whilst this planet has gone cycling on according to the fixed law of gravity, from so simple a beginning endless forms most beautiful and most wonderful have been, and are being, evolved. Darwin
  145. 145. Complex phenotypes are challenging, but are likely the most meaningful Schmieder et al., (2015) PLOS ONE There is grandeur in this view of life, with its several powers, having been originally breathed into a few forms or into one; and that, whilst this planet has gone cycling on according to the fixed law of gravity, from so simple a beginning endless forms most beautiful and most wonderful have been, and are being, evolved. Darwin
  146. 146. Complex phenotypes are challenging, but are likely the most meaningful Wiley et al. (2005) virtual-anthropology.com There is grandeur in this view of life, with its several powers, having been originally breathed into a few forms or into one; and that, whilst this planet has gone cycling on according to the fixed law of gravity, from so simple a beginning endless forms most beautiful and most wonderful have been, and are being, evolved. Darwin
  147. 147. Complex phenotypes are challenging, but are likely the most meaningful Claes et al., (2014) PLOS Genet There is grandeur in this view of life, with its several powers, having been originally breathed into a few forms or into one; and that, whilst this planet has gone cycling on according to the fixed law of gravity, from so simple a beginning endless forms most beautiful and most wonderful have been, and are being, evolved. Darwin
  148. 148. St. Louis University Laura Klein Allison Miller USDA Geneva, NY Jason Londo Beth Takacs Bruce Reisch
  149. 149. Thanks! Margaret Frank Viktoriya Coneva Donald Danforth Plant Science Center