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Basics of stereochemistry.
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ORGANIC
TRANSFORMATIONS
Presented by: Zia Ur
Rehman
STEREOCHEMISTRY
Chemistry In Three Dimensions
ISOMERS
Different compounds having same molecular formula but
different structures.
Structural Isomers / Constitutional Isomers:
Distinguishable by two dimensional structure
The sequence in which the atoms are bonded to each other in the molecule.
e.g. C4H10
butane C C C C
H
H
H
H
H
H
H
H
H
H
n-butane
C
CH3
H3C
H
CH3
iso-butane
Stereoisomers:
Distinguishable by three dimensional structure
Isomers that differ in the way the atoms are oriented in space, but not in which atoms are bonded to which atoms.
e.g. cis-2-butene trans-2-butene
HC C
H3C CH3
H HC C
H3C H
CH3
Conformational Isomers
Stereoisomers which are interconvertible simply by rotation of one part of the molecule with respect to other about a single bond.
Eclipsed conformation:C-H bond opposite to each other
Staggered conformation:C-H bonds at maximum distance
C
H
H
H
C
H
H H
EclipsedC
H
H
HC
H
H H
Staggered
Stereoisomers which are not interconvertible without breaking and making the bonds, and can be isolated
Configurational Isomers
A chiral object is that which has non superimposable mirror image.
Chirality
An atom with four different groups attached
to it, is called chiral atom and also calledchiral center.
Chiral Center
Any object that has a plane or point of symmetry is achiral (not chiral).
An atom with four different groups are not attached to it, is called achiral atom.
Achiral
C
H
Cl
H
CH3
Enantiomers are stereoisomers that are non-superimposable on their mirror images.
Enantiomers
Diastereomers are stereoisomers that are not mirror images of each other – they are stereoisomers that are not enantiomers.
Diastereomers
C C
H
CH3
H3C
H
C C
CH3
H
H3C
H
The property of enantiomers to rotate the plane polarized light
towards left or right.
Compounds that rotate plane polarized light to the right
(clockwise) are called dextrorotatory, (d) or (+).
compounds that rotate plane polarized light to the left
(counter-clockwise) are called levorotatory (l) or (-).
Optical Activity
Light that has been passed through a nicol prism or other polarizing medium so that all of the vibrations are in the same plane.
plane polarized light
non-polarized polarized
Polarimeter
It is used to measure thr optical activity of a compund.
Specific Rotation
The angle of rotation of plane polarized light by a 1.00 gram per cm-3 sample in a 1 dm tube. [α ]D (D = sodium lamp, λ = 589 mμ).
α[ α ]D = where α = observed rotation l * d
l = length (dm)
d = concentration (g/cc)
(+)-alanine [ α ]D = +8.5
(-)-lactic acid [α ]D = -3.8
Drawing Enantiomers
Fischer Projection:
Newman Projection:
R,S-System
The atom of higher atomic number has the higher priority.
1
2 3
4
(S)-2-bromobutane
Erythro isomer has two identical substituents on the same side and the threo isomer has them on opposite side.
Erythro,Threo-System
Syn describes groups on the “same” face while anti describes groups on “opposite” face.
Syn,Anti-System
If the two groups with the higher priorities are on the same side of the double bond, that is described as the (Z)- isomer.
If the two groups with the higher priorities are on opposite sides of the double bond, then this is the (E)- isomer.
E,Z-System
Contains chiral center but their mirror images are non superimposeable.
Meso Compound
Cl HCH3
Cl HCH3
H ClCH3
H ClCH3
An equimolar mixture of a pair of enantiomers is called racemate or racemic mixture.
It is denoted by symbol ( ).
Racemic Mixture
+-
C COOH
H3C
HCl
C COOH
H3C
ClH
+
+_ - -Chloropropanoic acid
A stereoselective reaction can produce multiple stereoisomers theoretically, but more of some produced than others.
Stereoselective Reaction
Prominent
A stereospecific reaction produces different stereoisomer products from different stereoisomer reactants.
Stereospecific Reaction
Since most of the natural (biological) environment consists of enantiomeric molecules (amino acids,nucleosides, carbohydrates and phospholipids are chiral molecules), then enantiomers will display different properties. Then, in our body:
Biological Significance of Chirality
Food Technology
D-Amino acid is purposeful in fermented products such as
cheeses, yoghurt, wine or viniger.
“L” form of glutaminic acid is the carrier of taste such as
meat, brothy or umami taste.
In plant essential oils
In fruit flavor
Pharmaceuticals
Polymers Chiral stationary phases in high performance liquid
chromatography (HPLC).
Asymmetric catalysis applications.
Chiral liquid crystals in ferroelectrics and nonlinear optical
devices (cholesteric liquid-crystalline oligomers).
Very soluble, optically active, potentially ion exchangeable, and
thermally stable chiral polymers are synthesized (poly(hydra-zide-
imide)s containing ethyl L-lysine ester).
Pressure-Sensitive Touch Panel Based on Piezoelectric Poly(L-
lactic acid) Film.