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Instrument Mortar and pestle Reagent Triton X-100 Sample DNA Cell disruption Grind the leaf tissue using a mortar and pestle DNA purification Precipitate the DNA with 0.6 mL of 2-propanol. Goal: to accurately document and retrieve experimental protocols. Why: the protocols facilitate experimental reproducibility.

Olga giraldo flashtalk_icbo2015

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Instrument Mortar and pestle

Reagent Triton X-100

Sample  DNA  

Cell disruption

Grind the leaf tissue using a mortar and pestle

DNA purification

Precipitate the DNA with 0.6 mL of 2-propanol.

Goal: to accurately document and retrieve experimental protocols.

Why: the protocols facilitate experimental reproducibility.

SEMI-STRUCTURED

How to represent the information from protocols as a knowledge base?

…and NLP tools

By using ontologies

…To find out more, visit our poster!