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MCNext TM SYBR ® Fast qPCR Library Quantification Kit - The Revolution is Here Molecular Cloning Laboratories

MCNext Sybr qPCR quantification Kit

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A product launch power point for NGS sequencing qPCR Quantification kit. A unique kit directly measures library concentration, providing the fast and reliable solution for cluster density estimation for NGS.

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Page 1: MCNext Sybr qPCR quantification Kit

Molecular Cloning Laboratories

MCNextTM SYBR® Fast qPCR Library Quantification Kit- The Revolution is Here

Molecular Cloning Laboratories

Page 2: MCNext Sybr qPCR quantification Kit

Molecular Cloning Laboratories

The Only Ngs Library Quant Kit Using A Library Standard

Simpler workflow – direct (MC kit) vs. indirect (KAPA kit) cluster density conversionBroader dynamic range of measurement – 7-log (MC kit) vs. 6-log (KAPA kit) Superior accuracy – Phi X library (MC kit) vs. single DNA fragment (KAPA kit) as standard Reliable – more consistent in quantification comparing with KAPA kit

Page 3: MCNext Sybr qPCR quantification Kit

Molecular Cloning Laboratories

Kit Components

Component name Volume

2x MCNext SYBR Fast qPCR Master Mix 5 mL

10x Primer Mix 1 mL

Phi X Library Standards 10 µL

Storage Buffer 3 mL

50x Low ROX (optional) 200 µL

50x High ROX (optional) 200 µL

Page 4: MCNext Sybr qPCR quantification Kit

Molecular Cloning Laboratories

Kit Types

Kit type Description Cat #

Universal kit No ROX added to 2x qPCR Master Mix IQPQ-UN

Low ROX kitLow concentration ROX in 2x qPCR Master Mix

IQPQ-LR

Regular ROX kitRegular concentration ROX in 2x qPCR Master Mix

IQPQ

Page 5: MCNext Sybr qPCR quantification Kit

Molecular Cloning Laboratories

Broad Compatibility Coverage

Reference Dye Compatible Instruments

No ROXBioRad iCycler MiniOpticon, Opticon 2, iQ5; Roche LightCycler 480; MJ Research DNA Engine Opticon 2, Chromo 4; Corbett Rotogene 3000, 6000

Low ROX ABI 7500 qPCR Systems, ViiA 7, QuantStudio 12K Flex, Agilent Mx3000P and Mx4000

Regular ROX ABI PRISM 7000, 7700, 7900HT, ABI 7300 qPCR Systems, Ge-neAmp 5700, StepOne, and the StepOnePlus

Page 6: MCNext Sybr qPCR quantification Kit

Molecular Cloning Laboratories

Higher Signal Strength and Better Efficiency for Library Quantification

Higher fluorescence signal

Better efficiency

1.000

1.000 E+1

Cycle

10 15 20 25 30 35

MCNext Library qPCR Quantification Kit

KAPA SYBR FAST qPCR Kit®

Page 7: MCNext Sybr qPCR quantification Kit

Molecular Cloning Laboratories

Broader Dynamic Range for Library Quantification

10x better sample quantification range

Better efficiency

Broader dynamic range

MCNext Library qPCR Quantification Kit

KAPA SYBR

FAST qPCR Kit

0

5

10

15

20

25

30

-4 -3 -2 -1 0 1 2

Cty = -3.426x + 13.67R² = 0.9997

y = -3.423x + 14.078R² = 0.9998

®

Page 8: MCNext Sybr qPCR quantification Kit

Molecular Cloning Laboratories

Superior Accuracy for Library Quantification

Electropherogram from Agilent 2100 Bioanalyzer indicates library average size of 500bp size

The only kit on the world wide market using an NGS library to quantify NGS libraries

KAPA kit uses a 525 bp single cDNA fragment to quantify NGS libraries

Page 9: MCNext Sybr qPCR quantification Kit

Molecular Cloning Laboratories

High Quality of the Library Quantification Standards

Melting curve of library standards after PCR amplification

Single peak

No nonspecific amplification products

6.900 E-2

5.900 E-2

4.900 E-2

3.900 E-2

2.900 E-2

1.900 E-2

9.000 E-3

60.0 65.0 70.0 75.0 80.0 85.0 90.0

Der

ivat

ive

Temperature (˚C)

Page 10: MCNext Sybr qPCR quantification Kit

Molecular Cloning Laboratories

Better Quantification Consistency than KAPA kit

* Actual Illumina Phi X library concentration = 10 nM