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Influences on the Genetic Variation of Chelydra by Jack M. Corbo and H. Greg McDonald Bulletin of the Chicago Herpetological Society, June/July 2016

Jack corbo presentation on the population genetics of chelydra serpentina (north american snapping turtle)

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Page 1: Jack corbo presentation on the population genetics of chelydra serpentina (north american snapping turtle)

An Overview of the Paleoclimatic Influences on the Genetic Variation of Chelydra

by Jack M. Corbo and H. Greg McDonald

Bulletin of the Chicago Herpetological Society, June/July 2016

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“We must expect a compromise between the human need for pigeon-holing facts and the variety and fluidity of nature.” –J.S. Huxley

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Chelonian Lineage Unclear

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Odontochelys semitestacea

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Ancestral Chelonians

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Clypemys insculpta Maze Learning(N.A. Wood Turtle)

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PETM and Origins of Protochelydra

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Protochelydra zangerli56 Ma, Alaska

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Protochelydra Comparison

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Ohio Hopewell Culture (100BC-AD400) Snapping Turtle Platform Pipe

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1900’s Seneca Vessel Rattle (kanyáhte’ ká’owá)

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1808 American Political Cartoon of Jefferson Embargo Act

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Children’s Literature

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Scientific Literature

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Chelydra Art(Marty Capron)

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Reluctant Model Herps Alive Foundation

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Road Mortality Anthropogenic Interactions

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Non LethalAnthropogenic Interactions

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Anthropogenic Effects (faux bicephalic C. serpentina)

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Non Lethal Anthropogenic Effects

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Taxonomy

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Taxonomy of the Family Chelydridae

Macrochelys M. temminckii M. suwanniensis M. apachicolae

Chelydra C. serpentina C. rossignonii C. acutirostris

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Macrochelys temminckii(Alligator Snapping Turtle)

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Chelydra serpentina(North American Snapping Turtle)

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Chelydra and Macrochelys

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C. Serpentina Skeletal Features

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Prior Chelydra Taxonomy

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Prior Taxonomy Ranges

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Current Chelydra Taxonomy

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Arid Regions of North and South America

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“this species furnishes a case of distribution unparalleled among reptiles, ranging as it does from the (nearctic) cold regions of Canada to

the torrid region of Ecuador” (Cope, 1868)

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Extirpation of C. serpentinaWest of the Continental Divide

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Great Basin Past and Present

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Biochemistry Primer

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DNA

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Linear DNA

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Bacterial and Animal Cell Structure

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Animal CellStructure

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Mitochondria

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Mitochondria

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Plasmid mtDNA• Circular• Haploid• Maternal

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Population Genetics

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Parapatric Speciation

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Kinosternon baurii (Striped Mud Turtle)

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Kinosternon subrubrum(Eastern Mud Turtle)

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Sterntherus minor(Loggerhead Musk Turtle)

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Sternotherus odoratus(Common Musk Turtle)

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Trachemys scripta(Red-eared Slider)

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Trachemys scripta Range

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Dierchelys reticularia(Chicken Turtle)

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Lepomis punctatus (Spoted Sunfish)

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Gopherus polyphemus(Gopher Tortoise)

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Macroclemys temminckii(Alligator Snapping Turtle)

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M. temminckii(Alligator Snapping Turtle)

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Chelydra serpentina(North American Snapping Turtle)

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Chelydra serpentina CR mtDNA Sequence

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Chelydra Phylogram

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Panamanian Land Bridge 7 Ma

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The Great American InterchangePanamanian Land Bridge

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Plate Tectonics: Island Continents of

South America and Africa

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Tertiary Ocean Currents

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Chelydra Phylogram

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Genetic Bottlenecks:Population Crash and Recovery

(population vs time)

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Genetic Bottlenecks

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Population Crashes of Chelydra

Possible CatastrophesImpact Event

Glacial Advances Marine Transgression

Arid Climate

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Younger Dryas Impact Hypothesis

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Carolina Bays(elliptical lakes aimed at Michigan)

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Younger-Dryas Impact Event 12.9 ka

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Suspected Crater in Southern Ohio(cryptoexplosion)

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Megafaunal Extinctions

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Comparison of Younger Dryas Ejecta Field and Range of

M. temminckii

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Glaciations

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Glaciations and Interglacials

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Milankovich Cycle

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Glaciation Worldwide

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Ohio Glacial Maximum

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Megafauna Sites Found in Ohio

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Glacial Erratic BoulderSouth Euclid

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Palynology of Soil Core Samples

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Tree Ranges over 18,000 years(proxy ranges for C. serpentina)

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Percidae Species Density(Darters)

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Amphibian Species Density Map

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Mammal Species Density Map

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Terrapene carolina carolinaTransients

(Eastern Box Turtle)

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Chelydra Hatchlings

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Hatchling Freezing Mortality

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Chrysemys picta Range(Painted Turtle)

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C. picta Clade Ranges

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C. Picta Ranges

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Northern and Western Range Borders of C. serpentina

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C. serpentina Range

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C. serpentina Deformities

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Comparison of Mean July Temperature Isotherm

and C. sepentina Range

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18 ka Mean July Isotherms

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Caribbean Marine Transgressions

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Galapagos Islands

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Temperature-dependant Sex Determination

(TSD)

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C. SerpentinaTSD

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Chelydra rossignonii(Mexican Snapping Turtle)

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Refuge Theory

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C. Rossignonii Range and Refugia

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American Refugia and Flooding Areas

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Chelydra acutirostris(Ecuadorian Snapping Turtle)

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C. acutirostris Range and Refugia

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Dehydration Study(7 days)

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Kinosternon leucostomum(White-lipped Mud Turtle)

Distribution

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Kinosternon leucostomum(White-lipped Mud Turtle)

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K. Leucostomum Range

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North Eastern South America

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Kinosternon Scorpiodes(Scorpian Mud Turtle)

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Kinosternon Scorpiodes(Scorpian Mud Turtle)

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C. AcutirostrisColonization of Amazon Basin

Bonanza

Page 113: Jack corbo presentation on the population genetics of chelydra serpentina (north american snapping turtle)

“[Snapping turtles evoke impressions of a primitive nature

and time, because of their appearance and because they

shared the earth with the dinosaurs; they are] entitled to

regard the brontosaur and mastodon as brief zoological

fads.”-B. Gilbert

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Chelydra Phylogram

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Conclusions

• Alternating glacial and interglacial climatic changes caused a series of genetic bottlenecks in the North American C. serpentina population that resulted in one predominate CR mtDNA.

• Refugia embedded in the ranges of C. rossignonii and C. acutirostris preserved CR mtDNA polymorphism.

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Recommendations • Total genomes of peninsular and continental populations

of C. serpentina made to determine if they too are identical.

• More genomes of C. rossignonii and C. acutirostris should be determine to confirm that the polymorphisms exists throughout the two populations.

• Investigate if Chelydra fossils can be found in the northeastern hiadus region between C. sepentina and C. rossignonii ranges.

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AcknowledgementsReviewers:Dr. Ron Heyer, Smithsonian Institution Dr. Joe Hannibal, Cleveland Museum of Natural HistoryDr. Michael Hofreiter, Max Planck InstituteDr. John Iverson* (twice), Earlham CollegeDr. Chris Sheil, John Carroll UniversityDr. Harry van Keulen (emeritus), Cleveland State UniversityDr. George Zug* (emeritus), Smithsonian Institution Robert R. Perry*, Trebor Specialities, Inc.

Assistance:Dr. Brad Shaffer, University of California at Davis Dr. Don Moll, University of Southwestern MissouriDr. John Avise, University of California at Davis

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Acknowledgment

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The End