General updates about SBML and SBML Team activities
Michael Hucka and the rest of the SBML Team
Control and Dynamical SystemsDivision of Engineering and Applied Science
California Institute of TechnologyPasadena, CA, USA
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Out
line 1. SBML.org Updates
2. SBML Development
3. SBML Team Software
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SBML.org updates
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SBML Software Guide changes
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New version of the SBML software survey
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Forthcoming in the SBML Software Guide
More data about SBML software in the world
More accurate data about SBML software in the world
Statistics about SBML software in the world
• Examples: data on 81 software tools reported between May–July
SupportsSBML Level 3
36% Does not yet support Level 3
64%
MIRIAMSBO
SBGNBioPAXCellML
SED-MLMFAML
PNMLSBOL
0 5 10 15 20
111
33
613
1416
Total # tools supporting other standardsPercentage supporting
SBML Level 3
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Updated SBML Level 3 package activity table
http://sbml.org/Community/Wiki
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SBML Development
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SBML Development Process Progress
http://sbml.org/Documents/SBML_Development_Process10
Elaboration of process for Level 3 packages
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Further elaboration of package voting criteria12
Writing L3 package specs
Proper draft spec. for Hierarchical Model Composition almost ready
New LaTeX templates for SBML package specifications
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SBML Editor vote coming up
One new editor being replaced
• Nominations & voting open to anyone on sbml-discuss mailing list
Chris Jim Lucian
Sarah Frank Yours truly
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SBML Editor vote coming up
One new editor being replaced
• Nominations & voting open to anyone on sbml-discuss mailing list
?Chris Jim Lucian
Sarah Frank Yours truly
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SBML Team Software
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libSBML 5.0.0: over 3400 downloads since April
0
100
200
300
400
500
600
700
800
April May June July August
188158195
201
103
6412293
52
52
147103126
119
40 331298268215
155
Downloads of all libSBML 5.0.0 distributions since April
WindowsLinuxMac OS XSource
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Other software news
LibSBML, JSBML, SBMLToolbox, Online SBML Validator, others....
... Listen to Sarah, Frank, Nico & Andreas
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