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Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

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Page 1: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Use of Large Databases for Cancer Prevention and Control

ResearchGregory S. Cooper, MD

Case Western Reserve University

Page 2: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Goals

• Introduction to large database research

• Colon cancer screening

• Screening for Barrett’s esophagus

Page 3: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Existing Cancer Data Sources

• Screening– Telephone surveys (BRFSS)– Single health plan/institution

• Incidence/Treatment– Population-based registries (state, region)– Health plan/institution

• Follow Up– Health plan/institution

Page 4: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Limitations of Existing Data

• Generalizability

• Screening– Recall biases– Oversample higher SES

• No national-level registry

• Cancer patients– No pre- or post-treatment data

Page 5: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University
Page 6: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Advantages of Claims Data

• Nationally Representative– Community practice– Different treatment locations– Efficacy vs. effectiveness

• Large Sample Sizes

• Little Incremental Research Costs

• Turnaround Time Typically Low

Page 7: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Disadvantages

• Not Designed for Research– Nonstandardized definitions– No data on severity

• Coding Inaccuracies– Systematic– Random

• Missing Patients (VA, Age Cutoff, HMO, Outpatient)

Page 8: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Sources of Claims Data

• Federal Government– Medicare– VA

• State Level– Medicaid– Hospital discharges

• Private Insurers

Page 9: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Types of Medicare Files

• Part A 100% of patients (hospitalizations, skilled nursing short stay)

• Part B > 95% of patients (extra premium, outpatient treatment, physician services)

• All contain demographics, diagnosis (ICD-9) and procedure codes (ICD-9 hospital, CPT-4 outpatient services)

Page 10: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Diagnosis Codes - Example

• Enterostomy Malfunction

• Intestinal Adhesion with Obstruction

• Depressive Disorder

• Surgical Complication GI Tract

• Postoperative Infection

Page 11: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Procedure Codes - Example

• Pericolostomy Hernia Repair• Peritoneal Adhesiolysis• Culture-Peritoneum• Culture and Sensitivity-Lower Resp Tract• Pulmonary Artery Wedge Monitor• Insert Endotracheal Tube• Mechanical Respiratory Assistance• Small Bowel Series

Page 12: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Example - Narrative

• Patient with history of bowel resection admitted for surgical repair of malfunctioning enterostomy. On HD#1, underwent repair of pericolostomy hernia & lysis of adhesions. Developed postop infection & became acutely unstable. On HD#7, required PA monitoring, endotracheal intubation & mech ventilation.

Page 13: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Basic Methodology

Exclude H M O , patien ts < 65Incom plete c la im s

L inkage w ith O ther D ata

C ohort o f Interest ? Exclude P revious D iagnosis(P reva lent cases)

Se lect D iagnosis or P rocedure

Page 14: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Appropriate Conditions to Study

• Common diagnoses

• Seen in Medicare age population

• Result in hospitalization or encounter

• Coded frequently– Impact on reimbursement

Page 15: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Potential Linkages

• Socioeconomic Measures– Census data (proxy)

• Tumor Registry– SEER-Medicare

• Physician and Provider– AMA Master File, AHA

Page 16: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

SEER-Medicare Database

• Collaborative effort with NCI and CMS– patients 65 years linked by unique identifiers

• SEER population-based registries (states and metro areas)– Covers ~ 25% of US population

• All Medicare files– inpatient and outpatient records

Page 17: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University
Page 18: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

500

1000

1500

2000

2500

1965 1970 1975 1980

0.25

0.5

0.75

1

1.25

1.5

storksbabies

pairs

of b

rood

ing

stor

ks

mil l

ions

of

new

born

bab

ies

Page 19: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Colon Cancer Screening

What is current status of colon cancer screening?

What interventions protect against cancer development?

Page 20: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Physician Specialty and Endoscopic Procedures

• 5% sample of Medicare claims, 1993

• Procedures examined– Colonoscopy– EGD– Sigmoidoscopy

• Medicare and AMA designated specialties

Meyer, J Gen Intern Med 2000

Page 21: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Colonoscopy by Specialty

GIGenSurgColSurgGIMFP/GP

Page 22: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Flexible Sigmoidoscopy Use

GIGenSurgColSurgGIMFP/GP

Page 23: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Procedure Characteristics

• Specialists more likely to perform therapeutics, cancer or bleeding indications

• Generalists more likely in underserved counties

• Most colonoscopies and EGD’s by PCP’s in counties with at least one GI

Page 24: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Hospital Type and Patient Outcomes

• SEER-Medicare database 1984-93• Major surgery: Whipple, esophagectomy,

pneumonectomy, liver resection (colorectal), pelvic exenteration

• Hospitals classified by total number of procedures

• Adjusted for age, stage and comorbidityBegg, JAMA 1998

Page 25: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Hospital Volume and Mortality

0

2

4

6

8

10

12

14

16

18

30 Day Mortality

Whip Esoph Pneum Liver Pelvic

1--56--1011+

Page 26: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Current Status of Screening

• Use largely determined by telephone surveys

• Differences among population subgroups

• Impact of 1998 legislation– Colonoscopy in “high risk” every 2 years (fam

hx, hx polyp or cancer, IBD) – Yearly FOBT, sigmoidoscopy every 4 years,

screening barium enema as substitute

Page 27: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Cohort

• 1997-1999 Medicare Physician/Supplier and Outpatient files

• Claims for FOBT, flex sig, BE, colonoscopy

• Two comparison procedures (UGI and EGD)

• Approximately 25 million beneficiaries/year

Page 28: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Annual Procedure Use

0

2000

4000

6000

8000

10000

12000

14000

16000

per 100,000

FOBT FS Colon BE EGD UGI

199719981999

Page 29: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University
Page 30: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University
Page 31: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

P r o c e d u r e U s e b y Q u a r te r - M a le s

05 0 0

1 0 0 01 5 0 02 0 0 02 5 0 03 0 0 03 5 0 04 0 0 0

Q u a r t e r

Vol

/100

,000 F O B T

F SC YB E

Page 32: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Procedure Use in MenThree Year Average

0

2

4

6

8

10

12

14

16

18

FOBT Sig Colon BE EGD UGI

Ann

ual % Cau

AfAm

59%

61%

14%

18%

10%16%

Page 33: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Procedure Use in WomenThree Year Average

0

5

10

15

20

25

FOBT Sig Colon BE EGD UGI

Ann

ual % Cau

AfAm

47%

33%0%

15%18% 16%

Page 34: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Racial Differences in Indications for FOBT

0

2

4

6

8

10

12

14

16

M W M W

Ann

uali

zed

%

CauAfAm21% 13%

81%67%

DIAGNOSTIC SCREENING

Page 35: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Racial Differences in Indication for Colonoscopy

0

0.5

1

1.5

2

2.5

3

3.5

4

M W M W M W

Ann

uali

zed

%

CauAfAm

DIAG SURV SCREEN

20% 17%

117%

63%

30%

9%

Page 36: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Summary

• Use of screening procedures lower than targets

• Little impact of reimbursement changes

• Use of colonoscopy increased despite reimbursement issues

• Racial disparities persist

Page 37: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Barrett’s Screening

Does endoscopic screening improve outcome?

Page 38: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Prior EGD for Esophageal Adenocarcinoma

• Screening for and Surveillance of Barrett’s Esophagus Recommended

• Goal to Detect Presymptomatic High Grade Dysplasia and Adenocarcinoma

• Actual Use and Potential Impact of Screening Not Well Defined

Page 39: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Cohort

• SEER-Medicare Database

• Patients with Adenocarcinoma of the Esophagus (n=777) or Cardia (n=856)

• Diagnosed 1993-6

• Age 70

• Non-HMO enrollees

• Staged

Page 40: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Measures

• EGD Prior to Diagnosis– > 6 months– > 1 year

• Prior Diagnosis of Barrett’s Esophagus

• Stage at Diagnosis

• Survival - unadjusted, adjusted

Page 41: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Rate of Barrett’s Diagnosis & Prior EGD

7.5

14.713

1.3

8.66.8

0

2

4

6

8

10

12

14

16

% Patients

Esophagus Cardia

BE 6 mosEGD 6 mosEGD 1 yr

Page 42: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Staging Comparisons: 1 Year EGD & Esophageal Cancer

1.4

12.2

34.1

50

30.7

21.6

33.9

16.2

05

101520253035404550

% of Patients

In Situ Local Regional Distant

p<0.001

No EGDEGD

Page 43: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Staging Comparisons: 1 Year EGD & Cardia Adenocarcinoma

1.3 0

26

48.9

35.1

28.9

37.6

22.2

05

101520253035404550

% of Patients

In Situ Local Regional Distant

p<0.01

No EGDEGD

Page 44: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Outcomes of Patients With and Without Prior EGD

• Median Survival Time– Cardia: 8 months EGD vs. 6 months others– Esophagus: 7 months EGD vs. 5 months others

• Adjusted Survival– Cardia: Hazard Ratio 0.87 (0.63-1.20)– Esophagus: Hazard Ratio 0.73 (0.57-0.93)

Page 45: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Conclusions

• EGD Performed > 1 Year Prior to Diagnosis of Esophageal or Cardia Adenocarcinoma Associated with Earlier Stage at Diagnosis and Improved Survival

• Most Patients at Risk Appear Undiagnosed

Page 46: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Summary - 1

• Claims data provide a unique opportunity to study:– Epidemiological measures– Patterns of care/practice patterns– Treatment/outcome differences – Provider performance

• Data are linkable with registry, population demographics, provider characteristics

Page 47: Use of Large Databases for Cancer Prevention and Control Research Gregory S. Cooper, MD Case Western Reserve University

Summary - 2

• Complexity of files– inpatient alone simplest but also most limited– outpatient and pharmacy data complex

• Limitations of data– adequate severity adjustment – incident vs. prevalent cases– miscoding (random vs. systematic)