1
Upper Gamma gyrA serC serA hisH b aroA I aroF cmk rspA tyrA serC aroF tyrA cmk rspA himD aroQ pheA aroQ pheA gyrA serC serA aroQ pheA hisH b tyrA aroF cmk rspA himD gyrA gyrA serC serC ORF ORF hisH b tyrA aroF cmk rspA tyrA aroF cmk rspA himD gyrA ORF serC cmk rspA himD tyrA aroF gyrA serC hisH b tyrA aroF cmk rspA himD gyrA gyrA serC serC ORF aroF cmk rspA himD tyrA aroQ pheA aroQ pheA aroQ pheA aroQ pheA aroQ pheA aroQ pheA aroF cmk rspA himD gyrA serC hisH b cmk rspA tyrA aroF gyrA serC hisH b cmk rspA tyrA aroF himD gyrA serC cmk rspA tyrA aroF himD gyrA serC cmk rspA himD aroF tyrA aroF gyrA serC aroF cmk rspA tyrA gyrA serC aroF cmk rspA tyrA aroQ pheA aroQ pheA aroQ pheA aroQ pheA aroQ pheA aroQ pheA aroA I G tyrA aroF aroQ pheA cmk rspA himD cmk ORF rspA gyrA ORF serC ORF ORF ORF gyrA PROPOSED ANCESTRAL SYNTENY tyrA aroF tyrA GENE DISPERSAL Neisseria meningitidis Neisseria gonorrhoeae 3 Nitrosomonas europaea Ralstonia metallidurans Burkholderia cenocepacia Burkholderia fungorum Burkholderia mallei Burkholderia pseudomallei Bordetella parapertussis Chromobacterium violaceum 0.1 Acidithiobacillus ferrooxidans Xylella fastidiosa Xanthomonas axonopodis Xanthomonas campestris Azotobacter vinelandii Pseudomonas stutzeri Pseudomonas putida Pseudomonas syringae Pseudomonas aeruginosa Pseudomonas fluorescens Acinetobacter species Microbulbifer degradans Legionella pneumophila Coxiella burnetii et a 5 4 2 1 6 1 2 3 4 5 6 7 8 Lower Gamma Enteric lineage (see Fig. 7) LGT Intrusion Pseudogenes

Upper Gamma

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hisH b. rspA. gyrA. serA. tyrA. cmk. aroQ pheA. himD. serC. aroF. Nitrosomonas europaea. aroF. aroQ pheA. hisH b. 3. 2. 5. 1. 4. 6. tyrA. gyrA. rspA. cmk. aroQ pheA. serC. aroF. himD. Ralstonia metallidurans. hisH b. tyrA. rspA. gyrA. aroQ pheA. cmk. - PowerPoint PPT Presentation

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Page 1: Upper Gamma

Upper

Gamma

gyrA serC serA hisHb aroAI aroF cmk rspAtyrA

serC aroF tyrA cmk rspA himD

aroQ pheA

aroQ pheA

gyrA serC serA

aroQ pheA

hisHb tyrA aroF cmk rspA himD

gyrA

gyrA

serC

serC

ORF

ORF

hisHb tyrA aroF cmk rspA

tyrA aroF cmk rspA himD

gyrA ORFserC cmk rspA himDtyrA aroF

gyrA serC hisHb tyrA aroF cmk rspA himD

gyrA

gyrA

serC

serCORF

aroF cmk rspA himDtyrA

aroQ pheA

aroQ pheA

aroQ pheA

aroQ pheA

aroQ pheA

aroQ pheA

aroF cmk rspA himD

gyrA serC hisHb cmk rspAtyrA aroF

gyrA serC hisHb cmk rspAtyrA aroF himD

gyrA serC cmk rspAtyrA aroF himD

gyrA serC cmk rspA himD aroF

tyrA aroF

gyrA serC aroF cmk rspA tyrA

gyrA serC aroF cmk rspA tyrA

aroQ pheA

aroQ pheA

aroQ pheA

aroQ pheA

aroQ pheA

aroQ pheAaroAI G

tyrA aroFaroQ pheA cmk rspA himD

cmk ORF rspA

gyrA ORF serCORF ORF ORF

gyrA

PROPOSED ANCESTRAL SYNTENY

tyrA aroF

tyrA

GENE DISPERSALNeisseria meningitidisNeisseria gonorrhoeae

3Nitrosomonas europaea

Ralstonia metallidurans

Burkholderia cenocepacia

Burkholderia fungorum

Burkholderia mallei Burkholderia pseudomallei

Bordetella parapertussis

Chromobacterium violaceum

0.1

Acidithiobacillus ferrooxidans

Xylella fastidiosa

Xanthomonas axonopodisXanthomonas campestris

Azotobacter vinelandii

Pseudomonas stutzeri

Pseudomonas putida

Pseudomonas syringae

Pseudomonas aeruginosa

Pseudomonas fluorescens

Acinetobacter species

Microbulbifer degradans

Legionella pneumophila

Coxiella burnetii

eta

54

21

6

1

2

3

4

5

6

7

8

LowerGamma

Enteric lineage (see Fig. 7)

LGT Intrusion

Pseudogenes