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Swedish Institute for Infectious Disease Control, Karolinska Institutet, Stockholm University Martin Camitz

Swedish Institute for Infectious Disease Control, Karolinska Institutet, Stockholm University

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Swedish Institute for Infectious Disease Control, Karolinska Institutet, Stockholm University Martin Camitz. A stochastic model of a moderately contagious disease 1 in Sweden and the effect of restricting travel as a control strategy. 1 Read SARS. A stochastic model etc…. About the model - PowerPoint PPT Presentation

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Page 1: Swedish Institute for Infectious Disease Control, Karolinska Institutet, Stockholm University

Swedish Institute for Infectious Disease Control,

Karolinska Institutet,

Stockholm University

Martin Camitz

Page 2: Swedish Institute for Infectious Disease Control, Karolinska Institutet, Stockholm University

A stochastic model of a moderately A stochastic model of a moderately contagious diseasecontagious disease11 in Sweden and in Sweden and the effect of restricting travel as a the effect of restricting travel as a

control strategycontrol strategy

1Read SARS

Page 3: Swedish Institute for Infectious Disease Control, Karolinska Institutet, Stockholm University

A stochastic model etc…A stochastic model etc…

• About the model– Hufnagel et al’s model1

• Results

1Hufnagel, L., D. Brockmann, and T. Geisel, Forecast and control of epidemics in a globalized world. Proceedings of the National Academy of Sciences of the United States of America, 2004. 101(42): p. 15124-15129.

Page 4: Swedish Institute for Infectious Disease Control, Karolinska Institutet, Stockholm University
Page 5: Swedish Institute for Infectious Disease Control, Karolinska Institutet, Stockholm University
Page 6: Swedish Institute for Infectious Disease Control, Karolinska Institutet, Stockholm University

I

Stochasticitics… what?Stochasticitics… what?• What happens?

• When does this happen?

+I

R

I

Page 7: Swedish Institute for Infectious Disease Control, Karolinska Institutet, Stockholm University

Very randomVery random

Page 8: Swedish Institute for Infectious Disease Control, Karolinska Institutet, Stockholm University

SLIR-modelSLIR-model

IS L R

3 events

•Number of infectious

•Infectiousness

•Incubation time •Recovery time

etc…

×289

Page 9: Swedish Institute for Infectious Disease Control, Karolinska Institutet, Stockholm University

SLIR-modelSLIR-model

IS L R

3 events

•Incubation time •Recovery time

in Solnain Solna

•Infectious in other municipalities

•Travel intensity

•Number of infectious

•Infectiousness

in Solna

Page 10: Swedish Institute for Infectious Disease Control, Karolinska Institutet, Stockholm University

IntensitiesIntensities

IS L R

•Incubation time •Recovery time

•Infectious in other municipalities

•Travel intensity

•Number of infectious

•Infectiousness

QL QI QR

in Solna

Page 11: Swedish Institute for Infectious Disease Control, Karolinska Institutet, Stockholm University

1. Pick an event

QL QR

QL QI QR

QL QI

2. Pick a time step t

3. Update intensities

QIStockholm

4. Repeat from 1.

Kalmar

Solna

Page 12: Swedish Institute for Infectious Disease Control, Karolinska Institutet, Stockholm University

Run it on a really big Run it on a really big PC…PC…

Page 13: Swedish Institute for Infectious Disease Control, Karolinska Institutet, Stockholm University

You might get something like thisYou might get something like this

Page 14: Swedish Institute for Infectious Disease Control, Karolinska Institutet, Stockholm University

Or thisOr this

Page 15: Swedish Institute for Infectious Disease Control, Karolinska Institutet, Stockholm University

Just for sports, let’s not stop this time.Just for sports, let’s not stop this time.

Page 16: Swedish Institute for Infectious Disease Control, Karolinska Institutet, Stockholm University

• 1000 runs

• 60 days

• Average it all out

Much later…Much later…

Page 17: Swedish Institute for Infectious Disease Control, Karolinska Institutet, Stockholm University

Two questionsTwo questions

1. What happens if we restrict travel?– Say longer journeys than 50 km or 20 km no

longer permitted.

2. What if traveling doesn’t spread SARS as much as we thought?

Page 18: Swedish Institute for Infectious Disease Control, Karolinska Institutet, Stockholm University

Restricting travelRestricting travel

Page 19: Swedish Institute for Infectious Disease Control, Karolinska Institutet, Stockholm University

Restricting travelRestricting travel

Page 20: Swedish Institute for Infectious Disease Control, Karolinska Institutet, Stockholm University

Fiddling with inter-municipal Fiddling with inter-municipal infectiousnessinfectiousness

• Things that probably affect – Total travel intensity– Medium of travel– Type of transmission

• Does it matter?

Page 21: Swedish Institute for Infectious Disease Control, Karolinska Institutet, Stockholm University

Fiddling Fiddling with with

Page 22: Swedish Institute for Infectious Disease Control, Karolinska Institutet, Stockholm University

ResultsResults

• It works!

• Travel restrictions slow the spread– Lower incidence after 60 days– Globally and locally

• Comparatative results independent of