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NATURE CHEMISTRY | www.nature.com/naturechemistry 1
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.1146
S1
Supplementary Information
Naoki Ousaka, Yuki Takeyama, Hiroki Iida, and Eiji Yashima*
Department of Molecular Design and Engineering, Graduate School of Engineering,
Nagoya University, Chikusaku, Nagoya 4648603, Japan.
*To whom correspondence should be addressed. Email:
Table of Contents
Experimental Section
1. Instruments S2
2. Materials S2
3. Synthetic Procedures for the Ligand Peptides S2
4. Xray Crystallographic Analysis S19
5. Simulations of Chiral Amplification in the Ligand Exchange Reaction S21
between HomoCoII Complexes of ΛD and Racemic
6. Supporting References S25
Supporting Data S26
Chart S1 S26
Figures S1S20 S27
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S2
The NMR spectra were taken using a Varian UNITY INOVA 500AS spectrometer. Chemical
shifts are reported in parts per million (δ) downfield from tetramethylsilane (TMS) as the internal
standard in CDCl3, and from residual undeuterated solvent as the internal standard in (CD3)2SO and
CD3CN. The electron and cold spray ionization mass spectra (ESIMS and CSIMS) were recorded
on a Bruker Daltonics microTOFQ II spectrometer (Billerica, MA). The matrixassisted laser
desorptionionization timeofflight mass spectra (MALDITOFMS) were measured using a
Bruker Daltonics ultraflex III MALDITOF/TOF mass spectrometer or a Shimadzu AXIMACFR
Plus spectrometer (Kyoto, Japan) with a positive mode using 1,8,9anthracene triol (dithranol) as
the matrix. The absorption and CD spectra were measured in 0.1 and 1.0cm quartz cells on a
JASCO V570 spectrophotometer and a JASCO J820 spectropolarimeter, respectively. The
temperature was controlled by a JASCO PTC423L apparatus. The single crystal Xray diffraction
measurements were performed on a Bruker SMART APEX II Ultra diffractometer with MoKα
radiation (λ = 0.71073 Å) at 93 K.
All starting materials and dehydrated solvents were purchased from Aldrich Co. (WI), Wako Pure
Chemical Industries (Osaka, Japan), Kokusan Chemical Co. Ltd. (Tokyo, Japan), and Tokyo Kasei
Kogyo (TCI) (Tokyo, Japan) unless otherwise noted. All solvents for the preparations and the
spectroscopic measurements of iron and cobalt complexes were deoxygenated by bubbling argon
gas prior to use.
Abbreviations of chemicals:
Boc: butoxycarbonyl,
TosOH: toluenesulfonic acid,
Aib: αaminoisobutyric acid,
Ac6c: 1aminocyclohexanecarboxylic acid,
Bzl: benzyl,
HATU: (7azabenzotrizol1yl)1,1,3,3tetramethyluronium hexafluorophosphate,
EDC: 1ethyl3(3dimethylaminopropyl)carbodiimide hydrochloride,
HOAt: 7aza1hydroxy1,2,3benzotriazole,
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SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.1146
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HOBt: 1hydroxybenzotriazole monohydrate,
DIEA: ,diisopropylethylamine,
NMM: methylmorpholine,
Tg: 2(2(2methoxyethoxy)ethoxy)ethyl,
BrBz: bromobenzyl
ABocprotecting group was removed by treatment
with HCO2H or 4M HCl in dioxane. The Ndeprotected peptide formic acid salt was neutralized
with aqueous 5% NaHCO3. The resulting Ndeprotected peptide and Ndeprotected peptide
hydrochloride salts were used without further purification unless otherwise noted. The
Bzlprotecting group was removed by treatment with 10% PdC/H2. Peptide coupling reactions
were carried out by HOAt/HATU or EDC/HOBt methods. 2,2'Bipyridine5,5'dicarbonyl
dichloride was prepared by heating the corresponding dicarboxylic acid with thionyl chloride at
reflux for overnight.
To a suspension of 2,2'bipyridine5,5'dicarbonyl dichloride (23 mg, 0.08 mmol) in dry
CH2Cl2 (2 mL) was added HClHLValAibOMe (46 mg, 0.18 mmol) in dry CH2Cl2 (4 mL),
which had been obtained by treatment of BocLValAibOMe () with 4 M HCl in dioxane, and
then DIEA (68 L, 0.41 mmol) at room temperature. The reaction mixture was stirred at room
temperature for 2 h. After the solvent was evaporated to dryness under reduced pressure, the residue
was purified by column chromatography on silica gel [CHCl3/methanol (9/1) as eluent].
Precipitation from CHCl3 to Et2O afforded the ligand (49 mg, 96%) as a white solid.
MALDITOFMS: [M+Na]+ (calcd. 663.31): found. 663.33. HRMS (ESIMS) (positive): [M +
Na]+ (calcd. 663.3113): found. 663.3118. 1H NMR (500 MHz, CDCl3): δ = 9.04 (d, = 2.1 Hz, 2H),
8.46 (d, = 8.2 Hz, 2H), 8.15 (dd, = 2.3, 8.3 Hz, 2H), 7.18 (d, = 8.3 Hz, 2H), 6.65 (s, 2H), 4.52
(dd, = 6.9, 8.3 Hz, 2H), 3.73 (s, 6H), 2.292.23 (m, 2H), 1.58 (s, 12H), 1.08 (d, = 6.8 Hz, 6H),
1.07 (d, = 6.7 Hz, 6H).
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To a solution of BocAibOH (4.0 g, 4.92 mmol) in dry CH2Cl2 (20 mL) were
added HATU (1.87 g, 4.92 mmol) and DIEA (1.0 mL, 6.15 mmol) at 0°C. After 30 min,
TosOHHAc6cOBzl (1.99 g, 4.92 mmol) and DIEA (0.82 mL, 4.92 mmol) were added. The
reaction mixture was stirred at 0°C for 1 h and further at room temperature for 3 days. Then, the
solvent was evaporated to dryness under reduced pressure. The residue was dissolved in EtOAc,
and the solution was washed with 1N aqueous HCl, 5% aqueous NaHCO3, brine, and dried over
MgSO4. Purification by column chromatography on silica gel (EtOAc as eluent) afforded
BocAibAc6cOBzl (1.73 g, 84.2%) as a white solid. MALDITOFMS: [M+Na]+ (calcd. 441.23):
found. 441.21. 1H NMR (500 MHz, CDCl3): δ = 7.36–7.28 (m + s, 6H), 5.11 (s, 2H), 4.79 (s, 1H),
2.12 (bs, 1H), 2.10 (bs, 1H), 1.821.76 (m, 2H), 1.66–1.22 (m, 6H), 1.44 (s, 9H), 1.42 (s, 6H).
To a solution of BocAibAc6cOH (151 mg, 0.46 mmol), which
had been obtained by treatment of BocAibAc6cOBzl with 10% PdC/H2 in THF/AcOH (15/1;
v/v), HOBt (91 mg, 0.60 mmol) and HClHLValAibOMe (173 mg, 0.69 mmol) in DMF (4 mL)
was added EDC (88 mg, 0.46 mmol) at 0°C. After 30 min, to this was added NMM (80 L, 0.73
mmol) was added, and the reaction mixture was stirred at 0°C for 3 h and further at room
temperature overnight. The solvent was then evaporated to dryness under reduced pressure. The
residue was dissolved in EtOAc, and the solution was washed with 1N aqueous HCl, 5% aqueous
NaHCO3, brine, and dried over MgSO4. Purification by column chromatography on silica gel
(EtOAc as eluent) afforded BocAibAc6cLValAibOMe (182 mg, 76.0%) as a white solid.
MALDITOFMS: [M+Na]+ (calcd. 549.33): found. 549.36. 1H NMR (500 MHz, CDCl3): δ = 7.29
(s, 1H), 7.09 (d, = 8.5 Hz, 1H), 6.76 (s, 1H), 4.91 (s, 1H), 4.37 (dd, = 4.6, 8.6 Hz, 1H), 3.67 (s,
3H), 2.55–2.46 (m, 1H), 2.27 (bd, = 14 Hz, 1H), 2.10–2.04 (m, 1H), 1.91–1.85 (m, 1H), 1.77–1.65
(m, 4H), 1.53 (s, 3H), 1.52 (s, 3H), 1.48 (s, 3H), 1.46 (s + s, 12H), 1.43–1.20 (m, 3H), 0.97 (d, =
7.0 Hz, 3H), 0.92 (d, = 7.0 Hz, 3H).
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SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.1146
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To a suspension of 2,2'bipyridine5,5'dicarbonyl dichloride (37 mg, 0.13 mmol) and
HClHAibAc6cLValAibOMe (131 mg, 0.28 mmol) in dry CH2Cl2 (4 mL) was added DIEA
(137 L, 0.83 mmol) at room temperature. The reaction mixture was stirred at room temperature for
5 h. After the solvent was evaporated to dryness under reduced pressure, the residue was dissolved
in CHCl3 containing a small amount of MeOH, and the solution was washed with 1N aqueous HCl,
5% aqueous NaHCO3, brine, and dried over MgSO4. Purification by column chromatography on
silica gel [CHCl3/MeOH (9/1; v/v) as eluent] afforded the ligand (29 mg, 20.3%) as a white solid.
MALDITOFMS: [M+Na]+ (calcd. 1083.59): found. 1083.70. HRMS (ESIMS) (positive): [M +
Na]+ (calcd. 1083.5849): found. 1083.5848. 1H NMR (500 MHz, CD3CN): δ = 9.16 (dd, = 0.8, 2.3
Hz, 2H), 8.59 (dd, = 0.7, 8.3 Hz, 2H), 8.37 (dd, = 2.3, 8.3 Hz, 2H), 7.72 (s, 2H), 7.32 (d, = 8.8
Hz, 2H), 7.28 (s, 2H), 6.73 (s, 2H), 4.08 (dd, = 5.9, 8.7 Hz, 2H), 3.58 (s, 6H), 2.42–2.35 (m, 2H),
2.25–1.27 (m, 20H), 1.64 (s, 6H), 1.56 (s, 6H), 1.41 (s, 6H), 1.38 (s, 6H), 0.99 (d, = 6.8 Hz, 6H),
0.92 (d, = 6.9 Hz, 2H).
To a suspension of BocAibAc6cOH (2.00 g, 6.09 mmol) and HOAt
(418 mg, 3.07 mmol) in dry CH2Cl2 (20 mL) were added HATU (2.32 g, 6.09 mmol) and DIEA
(1.30 mL, 7.83 mmol) at 0°C. After 30 min, TosOHHAibOBzl (2.89 g, 7.91 mmol) and DIEA
(1.0 mL, 6.02 mmol) were added, and the reaction mixture was stirred at 0°C for 1 h and further at
room temperature for 3 days. The solvent was then evaporated to dryness under reduced pressure.
The residue was dissolved in EtOAc, and the solution was washed with 1N aqueous HCl, 5%
aqueous NaHCO3, brine, and dried over MgSO4. Purification by column chromatography on silica
gel (EtOAc as eluent) afforded BocAibAc6cAibOBzl (2.06 g, 67.5%) as a white solid.
MALDITOFMS: [M+Na]+ (calcd. 526.29): found. 526.29. 1H NMR (500 MHz, CDCl3): δ = 7.58
(s, 1H), 7.377.27 (m, 5H), 6.30 (s, 1H), 5.13 (s, 2H), 4.84 (s, 1H), 2.01 (s, 1H), 1.98 (s, 1H),
1.84–1.79 (m, 2H), 1.64–1.55 (m, 3H), 1.52 (s, 6H), 1.45 (s, 6H), 1.44 (s, 6H), 1.29–1.22 (m, 3H).
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To a suspension of BocAibAc6cAibOH (2.19 g, 5.29 mmol), which had
been obtained by treatment of BocAibAc6cAibOBzl with 10% PdC/H2 in THF/AcOH (7.5/1;
v/v), and HOAt (360 mg, 2.64 mmol) in dry CH2Cl2 (30 mL), HATU (2.01 g, 5.29 mmol) and
DIEA (1.1 mL, 6.60 mmol) were added at 0°C. After 30 min, TosOHHAc6cOBzl (2.78 g, 6.87
mmol) and DIEA (0.88 mL, 5.30 mmol) were added, and the reaction mixture was stirred at 0°C for
3 h and further at room temperature for 3 days. The solvent was then evaporated to dryness under
reduced pressure. The residue was dissolved in EtOAc, and the solution was washed with 1N
aqueous HCl, 5% aqueous NaHCO3, brine, and dried over MgSO4. Purification by column
chromatography on silica gel (EtOAc as eluent) afforded Boc(AibAc6c)2OBzl (3.04 g, 91.6%) as
a white solid. MALDITOFMS: [M+Na]+ (calcd. 651.37): found. 651.42. 1H NMR (500 MHz,
CDCl3): δ = 7.39 (s, 1H), 7.35–7.23 (m, 6H), 6.52 (s, 1H), 5.12 (s, 2H), 4.89 (s, 1H), 2.20 (s, 1H),
2.17 (s, 1H), 1.96–1.83 (m, 6H), 1.73–1.63 (m, 5H), 1.58–1.52 (m, 2H), 1.45 (s, 9H), 1.44 (s + s,
12H), 1.33–1.23 (m, 5H).
To a solution of Boc(AibAc6c)2OH (160 mg, 0.30 mmol),
which had been obtained by treatment of Boc(AibAc6c)2OBzl with 10% PdC/H2 in THF/H2O
(15/1; v/v), HOBt (59 mg, 0.39 mmol) and HClHLValAibOMe (113 mg, 0.45 mmol) in DMF
(2.5 mL) and then EDC (57 mg, 0.30 mmol) were added at 0°C. After 30 min, to this was added
NMM (52 L, 0.47 mmol), and the reaction mixture was stirred at 0°C for 2 h and further at room
temperature for 2 days. The solvent was then evaporated to dryness under reduced pressure. The
residue was dissolved in CHCl3, and the solution was washed with 1N aqueous HCl, 5% aqueous
NaHCO3, brine, and dried over MgSO4. Recrystallization from CHCl3/MeOH/Et2O (ca. 1/0.01/5;
v/v/v) afforded Boc(AibAc6c)2LValAibOMe (211 mg, 96.4%) as a white solid.
MALDITOFMS: [M+Na]+ (calcd. 759.46): found. 759.54. 1H NMR (500 MHz, CDCl3): δ = 7.83
(s, 1H), 7.38 (d, = 8.9 Hz, 1H), 7.32 (s, 1H), 7.14 (s, 1H), 6.58 (s, 1H), 5.04 (s, 1H), 4.40 (dd, =
5.6, 8.9 Hz, 1H), 3.68 (s, 3H), 2.53–2.46 (m, 2H), 2.12–1.95 (m, 4H), 1.84–1.18 (m, partially
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S7
overlapping with H2O signal), 1.53 (s, 3H), 1.51 (s, 3H), 1.50 (s, 3H), 1.49 (s + s, 12H), 1.01 (d, =
6.9 Hz, 3H), 0.93 (d, = 6.9 Hz, 3H).
To a solution of H(AibAc6c)2LValAibOMe (66.5 mg,
0.09 mmol), bromobenzoic acid (36.7 mg, 0.18 mmol), and HOBt (36.0 mg, 0.23 mmol) in DMF
(3 mL), was added EDC (34.7 mg, 0.18 mmol) at 0 °C. The reaction mixture was stirred at 0 °C for
2.5 h and further at room temperature for 2 days. The solvent was then evaporated to dryness under
reduced pressure. The residue was dissolved in CHCl3, and the solution was washed with 1N
aqueous HCl, 5% aqueous NaHCO3, brine, and dried over MgSO4. Recrystallization from
CHCl3/Et2O (ca. 1/10, v/v) afforded BrBz(AibAc6c)2LValAibOMe (73.5 mg, 99.6 %) as a
white solid. 1H NMR (500 MHz, CDCl3): δ = 7.71–7.64 (m. 5H), 7.34 (d, = 8.7 Hz, 1H), 7.33 (s,
1H), 7.16 (s, 1H), 6.84 (s, 1H), 6.43 (s, 1H), 4.31 (dd, J = 5.8, 8.7 Hz, 1H), 3.66 (s, 3H), 2.47–2.42
(m, 2H), 2.12 (s, 1H), 2.10 (s, 1H), 2.03–1.96 (m, 3H), 1.79–1.08 (m, partially overlapping with
H2O signal), 1.68 (s, 3H), 1.60 (s, 3H), 1.57 (s, 3H), 1.51 (s, 3H), 1.49 (s, 3H), 1.48 (s, 3H), 1.00 (d,
= 6.9 Hz, 3H), 0.91 (d, = 6.9 Hz, 3H). MALDITOFMS: [M + Na+] (calcd: 842.35): found.
842.36.
To 2,2'bipyridine5,5'dicarbonyl dichloride (26 mg, 0.093 mmol), a solution of
H(AibAc6c)2LValAibOMe (130 mg, 0.204 mmol) in dry CH2Cl2 (7 mL) containing DIEA (77
L, 0.46 mmol) was added at room temperature. After the reaction mixture was stirred at room
temperature for 3 h, the solvent was evaporated to dryness under reduced pressure. Recrystallization
from CHCl3/MeOH/EtOAc/hexane (ca. 2/1/8/4; v/v/v/v) afforded the ligand (126 mg, 91.8%)
as a white solid. MALDITOFMS: [M+Na]+ (calcd. 1503.86): found. 1504.00. HRMS (ESIMS)
(positive): [M + Na]+ (calcd. 1503.8586): found. 1503.8590. 1H NMR [500 MHz, (CD3)2SO]: δ =
9.26 (dd, = 0.7, 2.2 Hz, 2H), 9.00 (s, 2H), 8.58 (d, = 8.4 Hz, 2H), 8.53 (dd, = 2.3, 8.3 Hz, 2H),
7.83 (s, 2H), 7.62 (s, 2H), 7.38 (s, 2H), 7.32 (d, = 8.7 Hz, 2H), 7.20 (s, 2H), 3.95 (dd, = 6.7, 8.6
Hz, 2H), 3.54 (s, 6H), 2.28–2.26 (m, 2H), 2.24–2.17 (m, 2H), 2.00–1.10 (m, 40H), 1.56 (s, 6H),
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1.53 (s, 6H), 1.49 (s, 6H), 1.39 (s, 6H), 1.34 (s, 12H), 0.92 (d, = 6.9 Hz, 6H), 0.85 (d, = 6.9 Hz,
6H).
To a solution of BocAibOH (1.04 g, 5.17 mmol) in dry THF (8 mL) was added
,’carbonyldiimidazole (0.83 g, 5.17 mmol) at 0°C. After 1 h, to this was added a solution of
triethylene glycol monomethyl ether (1.68 g, 10.23 mmol) and ,dimethylaminopyridine (64 mg,
0.52 mmol) in dry THF (4 mL) at 0°C. The reaction mixture was gradually warmed to room
temperature, and then heated to 60°C for 22 h under stirring. After the solvent was evaporated to
dryness under reduced pressure, the residue was dissolved in EtOAc, and the solution was washed
with 1N aqueous HCl, 5% aqueous NaHCO3, brine, and dried over MgSO4. Evaporation of the
solvent afforded BocAibOTg (1.42 g, 78.5%) as a colorless oil. MALDITOFMS: [M+Na]+
(calcd. 386.22): found. 386.12. 1H NMR (500 MHz, CDCl3): δ = 5.08 (bs, 1H), 4.29–4.27 (m, 2H),
3.71–3.69 (m, 2H), 3.66–3.64 (m, 6H), 3.56–3.54 (m, 2H), 3.38 (s, 3H), 1.51 (s, 6H), 1.43 (s, 9H).
To a solution of BocLValOH (362 mg, 1.67 mmol), HOBt (332 mg, 2.17
mmol), and HClHAibOTg (477 mg, 1.67 mmol) in DMF (4 mL) was added EDC (320 mg, 1.67
mmol) at 0°C. After 1 h, NMM (184 L, 1.67 mmol) was added and the reaction mixture was
stirred at 0°C for 3 h and further at room temperature for 2 days. The solvent was then evaporated
to dryness under reduced pressure. The residue was dissolved in CHCl3, and the solution was
washed with 1N aqueous HCl, 5% aqueous NaHCO3, brine, and dried over MgSO4. Purification by
column chromatography on silica gel (EtOAc as eluent) afforded BocLValAibOTg (543 mg,
72.6%) as a colorless oil. MALDITOFMS: [M+Na]+ (calcd. 471.27): found. 471.18. 1H NMR
(500 MHz, CDCl3): δ = 6.52 (s, 1H), 5.12 (d, = 7.6 Hz, 1H), 4.34–4.24 (m, 2H), 3.84 (t, = 7.3
Hz, 1H), 3.69 (t, = 4.9 Hz, 2H), 3.66–3.64 (m, 6H), 3.56–3.54 (m, 2H), 3.38 (s, 3H), 2.15–2.09 (m,
1H), 1.57 (s, 3H), 1.55 (s, 3H), 1.45 (s, 9H), 0.96 (d, = 6.8 Hz, 3H), 0.92 (d, = 6.9 Hz, 3H).
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To a suspension of BocAc6cOH (1.50 g, 6.17 mmol) and HOAt (0.42 g, 3.08
mmol) in dry CH2Cl2 (25 mL), HATU (2.34 g, 6.17 mmol) and DIEA (1.28 mL, 7.71 mmol) were
added at 0°C. After 45 min, TosOHHAc6cOBzl (2.50 g, 6.17 mmol) and DIEA (1.08 mL, 6.47
mmol) were added, and the reaction mixture was stirred at 0°C for 30 min and further at room
temperature for 5 days. The solvent was then evaporated to dryness under reduced pressure. The
residue was dissolved in EtOAc, and the solution was washed with 1N aqueous HCl, 5% aqueous
NaHCO3, brine, and dried over MgSO4. Purification of the residue by precipitation from EtOAc to
hexane and further by column chromatography on silica gel [EtOAc/CHCl3 (8/2; v/v) as eluent]
afforded Boc(Ac6c)2OBzl (1.79 g, 63.4%) as a white solid. MALDITOFMS: [M+Na]+ (calcd.
481.27): found. 481.28. 1H NMR (500 MHz, CDCl3): δ = 7.52 (s, 1H), 7.357.28 (m, 5H), 5.11 (s,
2H), 4.55 (s, 1H), 2.11 (bs, 1H), 2.09 (bs, 1H), 1.95 (bs, 1H), 1.93 (bs, 1H), 1.82–1.75 (m, 4H),
1.65–1.54 (m, 6H), 1.50–1.20 (m + s, 15H).
NH
O
O
OO
3
To a suspension of Boc(Ac6c)2OH (1.00 g, 2.71 mmol), which had been
obtained by treatment of Boc(Ac6c)2OBzl with 10% PdC/H2 in THF/H2O (10/1; v/v), and HOAt
(0.19 g, 1.36 mmol) in dry CH2Cl2 (8 mL), HATU (1.03 g, 2.71 mmol) and DIEA (0.56 mL, 3.39
mmol) were added at 0°C. After 40 min, TosOHHAc6cOBzl (1.54 g, 6.17 mmol) and DIEA
(0.66 mL, 3.99 mmol) were added and the reaction mixture was stirred at 0°C for 2 h and further at
room temperature for 4 days. The solution was then diluted with CHCl3 and the mixture was
washed with 1N aqueous HCl, 5% aqueous NaHCO3, brine, and dried over MgSO4. Purification by
column chromatography on silica gel (EtOAc as eluent) afforded Boc(Ac6c)3OBzl (1.53 g, 96.6%)
as a white solid. MALDITOFMS: [M+Na]+ (calcd. 606.35): found. 606.47. 1H NMR (500
MHz,CDCl3): δ = 7.64 (s, 1H), 7.34–7.27 (m, 5H), 6.42 (s, 1H), 5.08 (s, 2H), 5.80 (s, 1H), 2.16 (bs,
1H), 2.13 (bs, 1H), 2.05 (bs, 1H), 2.02 (bs, 1H), 1.92–1.76 (m, 8H), 1.70–1.54 (m, 10H), 1.43 (s,
9H), 1.33–1.20 (m, 8H).
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NH
O
O
OO
4
To a suspension of Boc(Ac6c)3OH (700 mg, 1.42 mmol), which had been
obtained by treatment of Boc(Ac6c)3OBzl with 10% PdC/H2 in THF/H2O (10/1; v/v), and HOAt
(97 mg, 0.71 mmol) in dry CH2Cl2 (6 mL), HATU (539 mg, 1.42 mmol) and DIEA (294 L, 1.77
mmol) were added at 0°C. After 45 min, to this was added TosOHHAc6cOBzl (805 mg, 1.99
mmol) and DIEA (346 mL, 2.09 mmol) and the reaction mixture was stirred at 0°C for 2 h and
further at room temperature for 6 days. The solution was then diluted with CHCl3 and the mixture
was washed with 1N aqueous HCl, 5% aqueous NaHCO3, brine, and dried over MgSO4.
Recrystallization from CHCl3/EtOAc/hexane (ca. 1/20/15; v/v/v) afforded Boc(Ac6c)4OBzl (968
mg, 96.3%) as a white solid. MALDITOFMS: [M+Na]+ (calcd. 731.44): found. 731.44. 1H NMR
(500 MHz, CDCl3): δ = 7.49 (s, 1H), 7.34–7.22 (m, 5H), 6.82 (s, 1H), 6.79 (s, 1H), 5.10 (s, 2H),
4.91 (s, 1H), 2.19–2.16 (m, 4H), 1.98–1.75 (m, 12H), 1.70–1.60 (m, 8H), 1.58–1.50 (m, 4H), 1.46
(s, 9H), 1.37–1.21 (m, 12H).
To a solution of Boc(Ac6c)4OH (160 mg, 0.26 mmol), which had
been obtained by treatment of Boc(Ac6c)4OBzl with 10% PdC/H2 in THF/H2O (10/1; v/v), HOBt
(52 mg, 0.34 mmol) and HClHLValAibOTg (139 mg, 0.36 mmol) in DMF (2.5 mL), and then
EDC (50 mg, 0.26 mmol) were added at 0°C. After 45 min, NMM (42 L, 0.38 mmol) was added
and the reaction mixture was stirred at 0°C for 2 h and further at room temperature for 2 days. The
solvent was then evaporated to dryness under reduced pressure. The residue was dissolved in
EtOAc, and the solution was washed with 1N aqueous HCl, 5% aqueous NaHCO3, brine, and dried
over MgSO4. The residue was precipitated from EtOAc to hexane and further purified by washing
with Et2O, affording Boc(Ac6c)4LValAibOTg (188 mg, 76.7%) as a white solid.
MALDITOFMS: [M+Na]+ (calcd. 971.60): found. 971.50. 1H NMR (500 MHz, CDCl3): δ = 7.30
(d, = 8.3 Hz, 1H), 7.29 (s, 1H), 7.23 (s, 1H), 7.17 (s, 1H), 6.80 (s, 1H), 5.08 (s, 1H), 4.34–4.31 (m,
1H), 4.29–4.20 (m, 2H), 3.71–3.63 (m, 8H), 3.56–3.54 (m, 2H), 3.38 (s, 3H), 2.50–2.39 (m + m,
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2H), 2.13–1.93 (m, 8H), 1.86–1.16 (m, partially overlapping with H2O signal), 1.52 (s, 3H), 1.49 (s,
9H), 1.48 (s, 3H), 0.99 (d, = 6.9 Hz, 3H), 0.93 (d, = 6.9 Hz, 3H).
Boc(Ac6c)4DValAibOTg was synthesized in the similar
procedure to that for the corresponding Lenantiomer (129 mg, 84.3%). MALDITOFMS:
[M+Na]+ (calcd. 971.60): found. 971.82.
To a suspension of 2,2'bipyridine5,5'dicarbonyl dichloride (23 mg, 0.084 mmol) in
dry CH2Cl2 (1 mL) was added H(Ac6c)4LValAibOTg (156 mg, 0.18 mmol) in dry CH2Cl2 (5
mL) containing DIEA (70 L, 0.42 mmol) at room temperature. After the reaction mixture was
stirred at room temperature for 3 h, the solvent was evaporated to dryness under reduced pressure.
Purification by reprecipitation from CHCl3/MeOH (ca. 3/1; v/v) to EtOAc afforded the ligand L
(153 mg, 96%) as a white solid. MALDITOFMS: [M+Na]+ (calcd. 1928.14): found. 1928.69.
HRMS (ESIMS) (positive): [M + Na]+ (calcd. 1928.1411): found. 1928.1360. 1H NMR (500 MHz,
CD3CN): δ = 9.20 (dd, = 0.71, 2.3 Hz, 2H), 8.60 (d, = 0.66 Hz, 2H), 8.59 (d, = 0.71 Hz, 2H),
7.50 (s, 2H), 7.40 (s, 2H), 7.26 (d, = 7.25 Hz, 2H), 7.23 (s, 2H), 7.18 (s, 2H), 6.90 (s, 2H),
4.20–4.15 (m, 2H), 4.09–4.04 (m, 2H), 3.95 (dd, = 1.6, 6.9 Hz, 2H), 3.61–3.60 (m, 4H), 3.57–3.52
(m, 12H), 3.46–3.44 (m, 4H), 3.28 (s, 6H), 2.36–1.04 (m, partially overlapping with H2O and the
residual undeuterated solvent signals), 1.40 (s, 6H), 1.39 (s, 6H), 0.97 (d, = 6.8 Hz, 6H), 0.91 (d,
= 6.9 Hz, 6H).
To a suspension of Boc(Ac6c)4OH (145 mg, 0.23 mmol) and HOAt (16
mg, 0.12 mmol) in dry CH2Cl2 (3 mL), HATU (89 mg, 0.23 mmol) and DIEA (49 L, 0.29 mmol)
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were added at 0°C. After 30 min, TosOHHAibOBzl (120 mg, 0.33 mmol) and DIEA (57 L,
0.34 mmol) were added and the reaction mixture was stirred at 0°C for 1 h and further at room
temperature for 3 days. The solution was then diluted with CHCl3 and the mixture was washed with
1N aqueous HCl, 5% aqueous NaHCO3, brine, and dried over MgSO4. Purification by
reprecipitation from EtOAc to hexane afforded Boc(Ac6c)4AibOBzl (155 mg, 83.4%) as a
white solid. MALDITOFMS: [M+Na]+ (calcd. 816.49): found. 816.54. 1H NMR (500
MHz,CDCl3): δ = 7.43 (s, 1H), 7.38–7.23 (m, 5H), 7.16 (s, 1H), 6.93 (s, 1H), 6.80 (s, 1H), 5.14 (s,
2H), 5.05 (s, 1H), 2.36 (bs, 2H), 2.04–1.18 (m, partially overlapping with H2O signal), 1.53 (s, 6H),
1.48 (s. 9H).
A mixture of HLValOH (600 mg, 5.12 mmol), TosOH monohydrate (1.17 g,
6.15 mmol) and triethylene glycol monomethyl ether (2.52 g, 15.37 mmol) in benzene (10 mL) was
stirred under reflux with a Dean Stark apparatus for 20 h. Then, the solvent was evaporated to
dryness under reduced pressure. The residue was dissolved in CHCl3, and the solution was washed
with 5% aqueous NaHCO3, and dried over MgSO4. Removal of the solvent in vacuo afforded
HLValOTg as colorless oil with approximately 50% purity (1.98 g), which was used without
further purification in the next step. To a solution of HLValOTg (860 mg, 3.27 mmol) in CH2Cl2
(3 mL), Boc2O (0.57 g, 2.61 mmol) was added at 0°C. After the reaction mixture was stirred at
room temperature for 3 h, the solvent was evaporated to dryness under reduced pressure. The
residue was dissolved in EtOAc, and the solution was washed with 1N aqueous HCl, 5% aqueous
NaHCO3, brine, and dried over MgSO4. Evaporating the solvent in vacuo afforded analytically pure
BocLValOTg (940 mg, 99%) as a colorless oil. MALDITOFMS: [M+Na]+ (calcd. 386.22):
found. 386.12. 1H NMR (500 MHz,CDCl3): δ = 5.05 (d, = 8.9 Hz, 1H), 4.36–4.24 (m, 3H),
3.723.64 (m, 8H), 3.56–3.54 (m, 2H), 3.38 (s, 3H), 2.19–2.12 (m, 1H), 1.45 (s, 9H), 0.96 (d, =
6.8 Hz, 3H), 0.89 (d, = 6.9 Hz, 3H).
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To a solution of Boc(Ac6c)4AibOH (115 mg, 0.16 mmol), which
had been obtained by treatment of Boc(Ac6c)4AibOBzl with 10% PdC/H2 in THF/H2O (10/1;
v/v), HOBt (33 mg, 0.21 mmol) and HClHLValOTg (68 mg, 0.23 mmol) in DMF (2 mL) and
then EDC (31 mg, 0.16 mmol) were added at 0°C. After 45 min, NMM (27 L, 0.24 mmol) was
added and the reaction mixture was stirred at 0°C for 1.5 h and further at room temperature for 2
days. The solvent was then evaporated to dryness under reduced pressure. The residue was
dissolved in EtOAc, and the solution was washed with 1N aqueous HCl, 5% aqueous NaHCO3,
brine, and dried over MgSO4. Precipitation from EtOAc to hexane (ca. 1/5; v/v) afforded
Boc(Ac6c)4AibLValOTg (123 mg, 79.4%) as a white solid. MALDITOFMS: [M+Na]+ (calcd.
971.60): found. 971.60. 1H NMR (500 MHz, CDCl3): δ = 7.47 (s, 1H), 7.34 (d, = 7.9 Hz, 1H),
7.20 (s, 1H), 7.10 (s, 1H), 6.80 (s, 1H), 5.07 (s, 1H), 4.39 (dd, = 6.2, 8.0 Hz, 1H), 4.32–4.19 (m,
2H), 3.70–3.68 (m, 2H), 3.67–3.62 (m, 6H), 3.56–3.54 (m, 2H), 3.38 (s, 3H), 2.33–1.21 (m,
partially overlapping with H2O and the residual undeuterated solvent signals), 1.54 (s, 3H), 1.53 (s,
3H), 1.49 (s, 9H), 1.02 (d, = 6.8 Hz, 3H), 1.00 (d, = 6.8 Hz, 3H).
To a suspension of 2,2'bipyridine5,5'dicarbonyl dichloride (14 mg, 0.051 mmol) in dry
CH2Cl2 (1 mL) was added H(Ac6c)4AibLValOTg (96 mg, 0.11 mmol) in dry CH2Cl2 (4 mL)
containing DIEA (42 L, 0.26 mmol) at room temperature. After the reaction mixture was stirred at
room temperature for 3 h, the solvent was evaporated to dryness under reduced pressure.
Purification by reprecipitation from CHCl3/MeOH (ca. 5/1; v/v) to EtOAc afforded the ligand (73
mg, 75%) as a white solid. MALDITOFMS: [M+Na]+ (calcd. 1928.14): found. 1928.64. HRMS
(ESIMS) (positive): [M + Na]+ (calcd. 1928.1411): found. 1928.1409. 1H NMR [500 MHz,
(CD3)2SO]: δ = 9.26 (d, = 1.6 Hz, 2H), 8.70 (s, 2H), 8.59 (d, = 8.3 Hz, 2H), 8.51 (dd, = 2.1,
8.3 Hz, 6H), 7.69 (s, 2H), 7.45 (s, 2H), 7.38 (s, 2H), 7.17 (s, 2H), 7.14 (d, = 7.6 Hz, 2H),
4.18–4.14 (m, 2H), 4.10–4.02 (m, 4H), 3.59–3.57 (m, 4H), 3.52–3.47 (m, 12H), 3.42–3.40 (m, 4H),
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3.23 (s, 6H), 2.25–1.09 (m, partially overlapping with H2O signal), 1.37 (s, 12H), 0.93 (d, = 6.7
Hz, 6H), 0.89 (d, = 6.8 Hz, 6H).
Ligand D was synthesized in the similar manner to that for the corresponding
Lenantiomer (80 mg, 87.6%). MALDITOFMS: [M+Na]+ (calcd. 1928.14): found. 1928.58.
HRMS (ESIMS) (positive): [M + Na]+ (calcd. 1928.1411): found. 1928.1425.
To a suspension of BocAibOH (290 mg, 1.43 mmol) and HOAt (97 mg, 0.72
mmol) in dry CH2Cl2 (3 mL), HATU (544 mg, 1.43 mmol) and DIEA (300 L, 1.79 mmol) were
added at 0°C. After 30 min, HClHAibOTg (409 mg, 1.43 mmol) in dry CH2Cl2 (4 mL) and DIEA
(240 L, 1.43 mmol) were added. The reaction mixture was stirred at 0°C for 1 h and further at
room temperature for 2 days. The solvent was then evaporated to dryness under reduced pressure.
The residue was dissolved in EtOAc, and the solution was washed with 1N aqueous HCl, 5%
aqueous NaHCO3, brine, and dried over MgSO4. Purification by column chromatography on silica
gel (EtOAc as eluent) afforded BocAib2OTg (366 mg, 59%) as a colorless oil. MALDITOFMS:
[M+Na]+ (calcd. 457.25): found. 457.22. 1H NMR (500 MHz,CDCl3): δ = 7.19 (bs, 1H), 5.07 (s,
1H), 4.29–4.27 (m, 2H), 3.70–3.68 (m, 2H), 3.66–3.63 (m, 6H), 3.56–3.54 (m, 2H), 3.38 (s, 3H),
1.54 (s, 6H), 1.47 (s, 6H), 1.45 (s, 9H).
To a suspension of Boc(Ac6c)4OH (77 mg, 0.124 mmol) and HOAt (8.5
mg, 0.062 mmol) in dry CH2Cl2 (1 mL), HATU (47.3 mg, 0.124 mmol) and DIEA (26 L, 0.156
mmol) were added at 0°C. After 45 min, HClHAib2OTg (65 mg, 0.174 mmol) and DIEA (30 L,
0.183 mmol) were added and the reaction mixture was stirred at 0°C for 1 h and further at room
temperature for 6 days. The solution was then diluted with CHCl3 and the mixture was washed with
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1N aqueous HCl, 5% aqueous NaHCO3, brine, and dried over MgSO4. Recrystallization from
EtOAc/hexane (ca. 1/5; v/v) afforded Boc(Ac6c)4Aib2OTg (76 mg, 65.5%) as a white solid.
MALDITOFMS: [M+Na]+ (calcd. 957.59): found. 957.73. 1H NMR (500 MHz,CDCl3): δ = 7.34
(s, 1H), 7.32 (s, 1H), 7.24 (s, 1H), 7.17 (s, 1H), 6.79 (s, 1H), 5.09 (s, 1H), 4.26–4.24 (m, 2H),
3.72–3.62 (m, 8H), 3.56–3.54 (m, 2H), 3.38 (s, 3H), 2.18 (bs, 2H), 1.99–1.23 (m, partially
overlapping with H2O signal), 1.51 (s, 6H), 1.50 (s, 6H), 1.49 (s, 9H).
To 2,2’bipyridine5,5’dicarbonyl dichloride (10 mg, 0.036 mmol) was added
H(Ac6c)4Aib2OTg (62 mg, 0.074 mmol) in dry CH2Cl2 (3.5 mL) containing DIEA (30 L, 0.178
mmol) at room temperature. After the reaction mixture was stirred at room temperature for 2.5 h,
the solvent was evaporated to dryness under reduced pressure. Recrystallization from
CHCl3/MeOH/EtOAc (ca. 4/1/4; v/v/v) afforded the ligand (49 mg, 73.7%) as a white solid.
MALDITOFMS: [M+Na]+ (calcd. 1900.11): found. 1900.45. HRMS (ESIMS) (positive):
[M+Na]+ (calcd. 1900.1098): found. 1900.1050. 1H NMR [500 MHz, CD3CN/CDCl3 (7/3; v/v)]: δ
= 9.20 (d, = 1.9 Hz, 2H), 8.60 (d, = 8.3 Hz, 2H), 8.39 (dd, = 2.1, 8.3 Hz, 2H), 7.47 (s, 2H),
7.39 (s, 2H), 7.34 (s, 2H), 7.30 (s, 2H), 7.25 (s, 2H), 6.82 (s, 2H), 4.14–4.12 (m, 4H), 3.64–3.54 (m,
16H), 3.49–3.47 (m, 4H), 3.31 (s, 6H), 2.21–1.13 (m, partially overlapping with H2O and the
residual nondeuterated solvent signals), 1.42 (s + s, 24H).
1H NMR (500 MHz, CD3CN): (equilibrium state) ()isomer: δ =
8.63 (d, = 8.5 Hz, 6H), 8.44 (dd, = 1.8, 8.4 Hz, 6H), 7.67 (d, = 1.5 Hz, 6H), 7.48 (d, = 8.8 Hz,
6H), 6.98 (s, 6H), 4.22 (m, overlapping with Λisomer), 3.58 (s, 18H), 2.05–1.97 (m, overlapping
with Λisomer and H2O signals), 1.38 (s, 18H), 1.37 (s, 18H), 0.87 (d, = 6.8 Hz, 18H), 0.76 (d, =
6.8 Hz, 18H); (Λ)isomer: δ = 8.61 (d, = 8.3 Hz, 6H), 8.40 (dd, = 1.9, 8.3 Hz, 6H), 7.53 (d, =
1.7 Hz, 6H), 7.51 (d, = 8.8 Hz, 6H), 7.01 (s, 6H), 4.22 (m, overlapping with isomer), 3.61 (s,
18H), 2.051.97 (m, overlapping with isomer and H2O signals), 1.41 (s, 18H), 1.39 (s, 18H), 0.89
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(d, = 6.9 Hz, 18H), 0.83 (d, = 6.8 Hz, 18H). HRMS (CSIMS) (positive): [M–BF4]+ (calcd.
2063.9040): found. 2063.9109.
1H NMR (500 MHz, CD3CN): (equilibrium state) ()isomer: δ =
8.85 (d, = 8.5 Hz, 6H), 8.58 (dd, = 1.7, 8.5 Hz, overlapping with Λisomer), 7.91 (s, 6H), 7.74 (s,
6H), 7.12 (s, 6H), 6.88 (d, = 8.9 Hz, 6H), 6.59 (s, 6H), 4.10–4.06 (m, overlapping with Λisomer),
3.56 (s, 18H), 2.09–1.25 (m, partially overlapping with H2O and the residual undeuterated solvent
signals), 1.23 (s, 18H), 0.82 (d, = 6.8 Hz, 18H), 0.59 (d, = 6.8 Hz, 18H). (Λ)isomer: δ = 8.77 (d,
= 8.5 Hz, 6H), 8.58 (dd, = 1.7, 8.5 Hz, overlapping with isomer), 7.83 (s, 6H), 7.69 (s, 6H),
7.14 (s, 6H), 6.81 (d, = 8.8 Hz, 6H), 6.58 (s, 6H), 4.10–4.06 (m, overlapping with isomer), 3.58
(s, 18H), 2.09–1.25 (m, partially overlapping with H2O and the residual undeuterated solvent
signals), 1.20 (s, 18H), 0.84 (d, = 6.8 Hz, 18H), 0.68 ( = 6.9 Hz, 18H). HRMS (CSIMS)
(positive): [M–BF4]+ (calcd. 3324.7250): found. 3324.7263.
1H NMR (500 MHz, CD3CN): (equilibrium state) major () isomer
(some peaks were overlapping with Λisomer); δ = 8.75 (d, = 8.2 Hz, 6H), 8.66 (dd, = 1.8, 8.5
Hz, 6H), 7.75 (d, = 1.3 Hz, 6H), 7.64 (s, 6H), 7.36 (s, 6H), 7.29 (d, = 7.9 Hz, 6H), 7.08 (s, 6H),
6.66 (s, 6H), 3.95 (bs, 6H), 3.59 (s, 18H), 2.311.83 and 1.63–1.02 (m, overlapping with H2O and
the residual undeuterated solvent signals), 1.53 (s, 18H), 1.41 (s, 36H), 1.40 (s, 18H), 1.38 (s, 18H),
1.27 (s, 18H), 0.95 (d, = 6.6 Hz, 18H), 0.89 (d, = 6.5 Hz, 18H). HRMS (CSIMS) (positive):
[M–2BF4]2+ (calcd. 2249.2711): found. 2249.2637.
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1H NMR (500 MHz, CD3CN): major () isomer (some peaks were
overlapped with Λisomer); δ = 8.96 (d, = 8.5 Hz, 6H), 8.70 (d, = 8.4 Hz, 6H), 7.87 (s, 6H), 7.20
(s, 6H), 7.17 (d, = 7,4 Hz, 6H), 7.09 (s, 6H), 7.07 (s, 6H), 6.65 (s, 6H), 4.19–4.04 (m, 12H), 3.95
(bs, 6H), 3.613.45 (m, 60H), 3.27 (s, 18H), 2.431.12 (m, overlapping with H2O and the residual
undeuterated solvent signals), 1.40 (s, 36H), 0.93 (d, = 6.7 Hz, 18H), 0.88 (d, = 6.4 Hz, 18H),
0.84–0.74 (m, 12H). HRMS (CSIMS) (positive): [M+2Na]2+ (calcd. 2995.6909): found.
2995.6847.
1H NMR (500 MHz, CD3CN): Major (Λ) isomer (some peaks were
overlapping with isomer); δ = 8.95 (d, = 8.5 Hz, 6H), 8.68 (d, = 8.4 Hz, 6H), 7.87 (s, 6H),
7.40 (s, 6H), 7.22 (s, 6H), 7.20 (bs, 6H), 7.09 (s, 6H), 7.08 (s, 6H), 6.65 (s, 6H), 4.22–4.09 (m, 18H),
3.61 (t, = 8.5 Hz, 12H), 3.54 (bs, 36H), 3.46 (bs, 12H), 3.28 (s, 18H), 2.37–1.14 (m, partially
overlapping with H2O and the residual undeuterated solvent signals), 1.40 (s, 18H), 1.38 (s, 18H),
0.98 (d, = 6.8 Hz, 18H), 0.94 (d, = 6.8 Hz, 18H), 0.84–0.74 (m, 12H). HRMS (CSIMS)
(positive): [M+2Na]2+ (calcd. 2995.6909): found. 2995.6911.
1H NMR (500 MHz, CD3CN): δ = 84.93 (bs, 6H), 15.87 (s, 6H),
6.98 (s, 6H), 6.62 (s, 6H), 6.59 (d, = 8.7 Hz, 6H), 5.60 (s, 6H), 4.30 (bs, 6H), 4.03–3.99 (m, 6H),
3.91–3.86 (m, 6H), 3.70–3.67 (m, 6H), 3.56–3.26 (m, 72H), 3.13 (s, 18H), 2.94–2.63 (m, 30H),
2.49–1.57 (m, partially overlapping with H2O and the residual undeuterated solvent signals), 1.41 (s,
18H), 1.22 (s, 18H), 0.72 (bs, 12H), 0.43 (bs, 6H), 0.29 (d, = 6.9 Hz, 18H), 0.08 (d, = 6.2 Hz,
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18H), –0.08 (bs, 6H), –0.51 (bs, 12H), –0.87 (bs, 12H), –1.20 (bs, 6H), –2.10 (bs, 18H), –2.66 (bs,
6H), –3.00 (bs, 12H), –4.80 (bs, 6H), –6.83 (bs, 6H), –8.01 (bs, 6H), –11.91 (bs, 6H). [M+2Na]2+
(calcd. 2972.1714): found. 2995.1754.
1H NMR (500 MHz, CD3CN): δ = 85.4 (bs, 6H), 15.90 (bs, 6H),
7.14 (s, 6H), 6.68 (s+s, 12H), 5.88 (bs, 6H), 4.00 (bs, 24H), 3.50–3.20 (m, 72H), 3.14 (bs, 18H),
2.86 (bs, 6H), 2.8–1.6 (br m, partially overlapping with H2O and the residual undeuterated solvent
signals), 1.50 (s, 18H), 1.44 (s, 18H), 1.07 (s, 18H), 0.77 (s, 18H), 0.58– –8.0 (br m). HRMS
(CSIMS) (positive): [M+2Na]2+ (calcd. 2930.1245): found. 2930.1181.
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Xray diffraction data for with Cl2 were collected on a Bruker SMART APEX II Ultra
diffractometer with MoKα radiation (λ = 0.71073 Å) at 93 K.
Single crystals of [Fe()3](Cl)2(CH3CN)9(O)4(NaCl) [C246H375Cl3FeN51NaO52, = 5064.16]
suitable for Xray diffraction study were grown by slow evaporation of a CH3CN solution of
[Fe()3](BF4)2 in the presence of three equivalents of TBAC at room temperature, and a single
violet crystal with dimensions 0.18 × 0.09 × 0.08 mm3 was selected for intensity measurements.
The unit cell was orthorhombic with the space group . Lattice constants with = 4, ρcalcd =
1.169 g cm–3, (MoKα) = 0.158 mm–1, (000) = 10848, 2θmax = 43.98° were = 19.1682(12), =
36.703(2), = 40.905(3) Å, and = 28779(3) Å3. A total of 88,376 reflections was collected, of
which 30014 reflections were independent (int = 0.0642). The structure was refined to final 1 =
0.1096 for 19014 data [>2σ()] with 3026 parameters and 2 = 0.3283 for all data, = 1.173,
and residual electron density max/min = 1.026/–0.510 e Å–3, CCDC deposit number 805308. The
ORTEP drawing is shown in Fig. S20, and crystal data and structure refinement are listed in Table
S1.
Data collection, indexing, and initial cell refinements were carried out using the program
APEX2 (). Frame integration and final cell refinements were performed using SAINT software
(). A multiple absorption correction for each data set was applied using the program SADABS
(). The structure was solved by direct methods and Fourier techniques using the program
SHELXS97 () and refined by fullmatrix least squares methods on 2 using SHELXL97 ().
A full set of data was collected for the crystal. However, the data at high angles larger than d >
1 Å were dominated by noise [I/sigma(I) < 1.0], and accordingly, may affect adversely the analysis
of the crystal structure. Therefore, those data were omitted. All nonhydrogen atoms were refined
anisotropically. All hydrogen atoms were calculated geometrically and refined using the riding
models. The water hydrogen atoms were not located because they have disordered configurations.
Some cyclohexyl, isopropyl, and methyl ester groups showed high or low Ueqs for C or O atoms.
We tried to resolve these problems by assigning alternative positions with partial occupancies, but
some of the atoms continue to have the high or low Ueqs as compared to neighbors, which are
indicative of the dynamic nature of the disorder in these groups.
Five LevelA and twenty LevelB alerts are suggested for the Xray data by PLATON/CIF
check program. These can be attributed as described above.
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Crystal data and structure refinement for with Cl2.
Empirical formula C246H375Cl3FeN51NaO52
Formula weight 5064.16
Temperature 93 K
Wavelength 0.71073 Å
Crystal system
Space group
Unit cell dimensions = 19.1682(12) Å α = 90°.
= 36.703(2) Å β = 90°.
= 40.905(3) Å γ = 90°.
Volume 28779(3) Å3
4
Density (calculated) 1.169 g/cm3
Absorption coefficient 0.158 mm1
F(000) 10848
Crystal size 0.18 × 0.09 × 0.08 mm3
Theta range for data collection 1.11 to 20.82°.
Index ranges 19≤ h≤ 19, 36≤ k≤ 22, 40≤ l≤ 38
Reflections collected 88376
Independent reflections 30014 [int = 0.0642]
Completeness to theta 99.8%
Absorption correction Empirical
Max. and min. transmission 0.9874 and 0.9721
Refinement method Fullmatrix leastsquares on F2
Data / restraints / parameters 30014 / 3207 / 3026
Goodnessoffit on F2 1.173
Final R indices [>2σ()] 1 = 0.1096, 2 = 0.2812
R indices (all data) 1 = 0.1644, 2 = 0.3283
Largest diff. peak and hole 1.026 and 0.510 e.Å3
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ΛΛΛΛ
Upon mixing of two homoCoII complexes (ΛD (Co(D)3) and racemic (Co())) in
different molar ratios in CH3CN/CD3CN, the two heteroCoII complexes, namely [Co(D)2()] and
[Co(D)()2] were newly formed along with the homoCoII complexes through the ligand exchange
reaction (eq 1).
Co(D)3 + Co() = Co(D)3 + Co(D)2() + Co(D)()2 + Co() (1)
The relative molar ratios of each CoII complex after reaching an equilibrium within several
hours were estimated by 1H NMR and the results are summarized in Table S2. We then estimated
the diastereomeric excess () values at the metal centers and the helixsense excess () values of
the peptide chains for the newly formed [Co(D)2()] and [Co(D)()2] complexes based on those
for the homoCoII complexes (ΛCo(D)3 ( = 100% (Λ) and = 100% ()) and racemic
Co()3 (= 0% and = 0%)) and the molar ratios for each species determined by the 1H NMR
spectra (Table S2), followed by the curve fitting of the observed CD changes at 332 and 213 nm,
respectively.
The relative molar ratios of Co(D)3, Co(D)2(), Co(D)()2, and Co()3 at
equilibrium estimated by 1H NMR
feed (mol/mol) at equilibrium
[Co(D)3]/[]* Co(D)3 Co(D)2() Co(D)()2 Co()
10/0 1.0 0 0 0
8/2 0.63 0.17 0.18 0.02
6/4 0.38 0.17 0.31 0.14
4/6 0.17 0.16 0.38 0.29
2/8 0.04 0.06 0.36 0.54
0/10 0 0 0 1.0 *[Co(D)3] + [Co()3] = constant (5.9 × 104 M).
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The observed CD intensity at 332 nm reflecting the metalcentered chirality induction after
reaching an equilibrium (θtotal) is the sum of the CD intensities of the four metal complexes (θCo(D)3,
θCo(D)2(), θCo(D)()2, and θCo()3) and then,
θtotal = αθCo(D)3 + βθCo(D)2() + γθCo(D)()2 + δθCo()3
The Co() is racemic and θCo()3 = 0 and then,
θtotal = αθCo(D)3 + β(θCo(D)3) + γ(θCo(D)3). (2)
where α, β, and γ are the relative molar ratios of the optically active Co(D)3, Co(D)2(), and
Co(D)()2, respectively, and and represent the values ( = θCo(D)2()/ θCo(D)3, =
θCo(D)()2/θCo(D)3, 0 ≤ ≤ ≤ 1) at the metal centers of Co(D)2() and Co(D)()2, respectively.
The CD intensity at 332 nm for ΛCo(D)3 (θCo(D)3 = 92.5) obtained from the CD spectrum of
ΛCo(D)3 (Fig. 4A) was used as the base value. Therefore, θtotal in eq (2) is expressed as
θtotal = 92.5(α + β+ γ). (3)
The CD intensities (θtotal) at the various molar ratios of Co(D)3 and Co() in the feed can
then be calculated based on the relative molar ratios of each metal complex at equilibrium (Table
S2).
Therefore,
[Co(D)3]/[ Co()] = 8/2: 15.4 + 16.7 = 29.7. (4)
[Co(D)3]/[ Co()] = 6/4: 15.9 + 28.4 = 40.5. (5)
[Co(D)3]/[ Co()] = 4/6: 14.3 + 35.6 = 43.1. (6)
[Co(D)3]/[ Co()] = 2/8: 5.8 + 33.8 = 30.9. (7)
By using eqs (4) — (7), the values ( and ) as a function of the Co(D)3 content in the
feed can be calculated by the curve fitting of the observed CD changes at 332 nm (Fig. 5b and Fig.
S13). The fitting curves (red line in Fig. 5b and green line in Fig. S13) satisfy the observed CD
changes (red circles in Fig. 4b and Fig. S13) when and are 1.0 and 0.81, respectively (see also
Fig. S14). For comparison, the simulated curves with the variable and values are also shown in
Fig. S13.
The CD intensity at 213 nm of the metal complexes at equilibrium reflects the excess
handedness of the helical peptide chains of the ligand D and racemic ligand coordinating to the
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metal, because there is an isodichroic point at 213 nm, at which the CD intensity remains constant
independent of the molar ratios of D and CoII as observed in the CD titration experiments (Fig.
S15). Thus, the CD intensity at 213 nm can be used to estimate the helixsense excess () of the
dynamically racemic helical ligand when coordinating to CoII.
A positive nonlinear effect (Fig. 5b, blue line) suggests that the ()helix was predominantly
induced in the dynamically racemic ligand during the complexation to CoII in the presence of D.
Thus, we first estimated the values of all the peptide ligands.
In a similar manner to Section , the observed CD intensity θtotal(213) at 213 nm after reaching
equilibrium is the sum of the CD intensities (θCo(D)3(213), θCo(D)2()
(213), and θCo(D)()2(213)) of the
three optically active metal complexes and then,
θtotal(213) = αθCo(D)3
(213) + βθCo(D)2()(213) + γθCo(D)()2
(213)
= αθCo(D)3(213) + β(θCo(D)3
(213)) + γ(θCo(D)3(213)) (8)
where α, β, and γ are the relative molar ratios of the optically active Co(D)3, Co(D)2(), and
Co(D)()2, respectively, and and represent the values ( = θCo(D)2()(213)/θCo(D)3
(213),
= θCo(D)()2(213)/θCo(D)3
(213), 0 ≤ ≤ ≤ 1) of all the ligand peptides of Co(D)2() and
Co(D)()2, respectively. The CD intensity at 213 nm for ΛCo(D)3 (θCo(D)3(213) = 11.6) obtained
from the CD spectrum of ΛCo(D)3 (Fig. 5a) was used as the base value. Therefore, θtotal(213) in eq
(8) is expressed as
θtotal(213) = 11.6(α + β+ γ). (9)
The CD intensities θtotal(213) at the various molar ratios of Co(D)3 and Co() in feed can be
then calculated based on the relative molar ratios of each metal complex at equilibrium (Table S2)..
Therefore,
[D]/[] = 8/2: 1.93 + 2.09 = 2.77. (10)
[D]/[] = 6/4: 1.99 + 3.55 = 3.65. (11)
[D]/[] = 4/6: 1.79 + 4.45 = 3.71. (12)
[D]/[] = 2/8: 0.73 + 4.22 = 2.26. (13)
In the Co(D)2() and Co(D)()2 complexes, four and two of the six peptide chains are
assumed to have the 100% ()helix (= 100%) based on the variabletemperature 1H NMR
results using the model peptide in CD2Cl2, although the present CD measurements were carried out
in the CH3CN/CD3CN mixture (3/1; v/v). We also presumed that the CD intensity of the ligand
may become equal to that of the ligand D when it takes the 100% ()helix. Accordingly, the CD
intensity of θCo(D)2()(213) is most likely higher than that of θCo(D)3
(213) by a factor of 0.67 and the
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CD intensity of θCo(D)()2(213) is higher than that of θCo(D)3
(213) by a factor of 0.33 by taking into
account the number of ligand Ds, leading to the relationships, 0.67 ≤ ≤ 1, 0.33 ≤ ≤1, and
≥ .
By using eqs (10) — (13), the values ( and ) as a function of the Co(D)3 content in
the feed can be calculated by the curve fitting of the observed CD changes at 213 nm (Fig. 5b and
Fig. S16). The fitting curve (blue line in Fig. 5b and green line in Fig. S16) satisfies the observed
CD changes (blue circles in Fig. 5b and Fig. S16) when and are 1.0–0.8 and 0.5–0.43,
respectively (see also Fig. S14). For comparison, the simulated curves with variable and
values are also shown in Fig. S16.
Next, we calculated the values and for the peptide ligand in the Co(D)2() and
Co(D)()2 complexes, respectively, based on the obtained and values and the equations (14
– 17).
In the Co(D)2() complex,four of the six peptide chains are optically active D with the
of 100%. Thus, the ligand contribution (θCo(D)3(213)) to the total CD intensity (θCo(D)2()
(213)) is
expressed as
θCo(D)3(213) = θCo(D)2()
(213) – 4/6 ×θCo(D)3(213)
= θCo(D)3(213) – 4/6 ×θCo(D)3
(213) (14)
θCo(D)3(213) is also expressed as
θCo(D)3(213) = 2/6 ×θCo(D)3
(213) × /100 (15)
where is the of the ligand in Co(D)2(). Therefore, by using eqs (14) and (15), is
expressed as
= 300 – 200 (0.67 ≤ ≤ 1) (16)
In the same way, the of the ligandin Co(D)()2, can be expressed as
= 150 – 50 [0.33 ≤ ≤1 ( ≥ )] (17)
By using the obtained and values and eqs (16) and (17), the values of the ligand in
Co(D)2() and Co(D)()2 are estimated to be = 70 ± 30 and = 20 ± 5%, respectively (see also
Fig. S14).
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(S1) Nagaraj, R., Shamala, N. & Balaram, P. Stereochemically constrained linear peptides.
conformations of peptides containing αaminoisobutyric acid. . , 16–20
(1979).
(S2) Bruker. APEX2, Bruker AXS Inc., Madison, Wisconsin, USA, 2010.
(S3) Bruker. SAINT, Bruker AXS Inc., Madison, Wisconsin, USA, 2004.
(S4) Sheldrick, G. M. SADABS, ., University of Göttingen:
Göttingen, Germany, 1996.
(S5) Sheldrick, G. M. , University of
Göttingen: Göttingen, Germany, 1997.
(S6) Sheldrick, G. M. , University of
Göttingen: Göttingen, Germany, 1997.
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The fulllength structures of peptide ligands and their metal (FeII, CoII) complexes.
Ligand :R =(0) = LValAibOCH3
Ligand : R =(1) = AibAc6cLValAibOCH3
Ligand : R = (2) = AibAc6cAibAc6cLValAibOCH3
Ligand L: R =(LVal) = Ac6cAc6cAc6cAc6cLValAibOTg
Ligand :R = = Ac6cAc6cAc6cAc6cAibLValOTg
Ligand D: R =(DVal) = Ac6cAc6cAc6cAc6cDValAibOTg
Ligand : R =(Aib) = Ac6cAc6cAc6cAc6cAibAibOTg
: Fe()3(BF4)2
: Fe()3(BF4)2
: Fe()3(BF4)2
: Fe(L)3(BF4)2
: Fe()3(BF4)2
D: Co(D)3(NO3)2
: Co()3(NO3)2
Ligand
(0)
(1)
(2)
(LVal)
(DVal)
(Aib)
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2060 2062 2064 2066 2068 2070mass (m/z)
3322 3324 3326 3328 3330 3332mass (m/z)
2248 2250 2252 2254mass (m/z)
2994 2996 2998 3000mass (m/z)
2994 2996 2998 3000mass (m/z)
2972 2974 2976 2978mass (m/z)
2930 2932 2934mass (m/z)
Experimental (upper) and simulated (bottom)
coldspray ionization (CSI) mass spectra of the metal
complexes –.
[M–BF4]+ [M–BF4]+ [M–2BF4]2+
[M+2Na]2+ [M+2Na]2+ [M+2Na]2+
[M+2Na]2+
D
Observed
Simulated
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Timedependent CD (upper) and absorption (bottom) spectra of FeII complex in
CH3CN/CD3CN mixture (3/1; v/v) at 25 ºC: [] = 1.5 × 104 M. The complex was prepared by
mixing CD3CN solutions of the ligand and FeII salt (t = 0), and the complex solution was
immediately diluted with CH3CN to follow the changes in its absorption and CD spectra.
Timedependent 1H NMR (500 MHz) spectra of FeII complex in CD3CN at 25 ºC:
[] = 6.2 × 104 M. The complex was prepared by mixing CD3CN solutions of the ligand and
FeII salt (t = 0).
200 250 300 350 40000.40.81.2
Wavelength (nm)
ε x
105
240
200
160
120
80
40
0
40
80
120
ε
24 h 650 min 300 min 270 min 240 min 210 min 180 min 150 min 120 min 100 min 80 min 60 min 40 min 20 min 4 min
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Plots of the– CD intensities at ca. 330 nm (|ε|) against the diastereomeric excesses
(%) for – estimated from their 1H NMR spectra at thermodynamically equilibrium state at 25
ºC.
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,1H1H NOESY (500 MHz) spectrum of FeII complex in CD3CN at thermodynamic
equilibrium state at 22 ºC: [] = 6.6 × 104 M; mixing time = 500 ms. , Expanded NOESY
spectrum of . , Graphical summary of the strong NOEs for in CD3CN. Arrows indicate the
observed strong NOEs between the protons. , Schematic representation of a rotation of the
bpy–amide bonds. Each conformer appears to equally exist as evidenced by the strong NOEs (see
Fig. S4b).
NOE NOE
(BF4)22 (BF4)2
2
Fe2+ Fe2+
4,4’ 6,6’
= NOEs between NH–N+1H
NH
O
O
HN
O
NH
O
O
HN
NH
O
O
HN
H
ONH
H H2
Fe2+
Broadening = Strong NOE
6,6’
3,3’ 4,4’
bpyOCH3
N(1)
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1H NMR (500 MHz) spectra of FeII complex with TEMPO in CD3CN at room
temperature: initial concentration [] = 6.6 × 104 M; percentage of TEMPO (w/v) = () 0, () 0.3,
() 0.5, () 0.9, and () 1.3. , Intramolecular Hbonding network for a 310helix of the peptide
hexamer residues ((2)). The peptide 310helix is characterized by three residues for one helical
turn accompanied with consecutive 10membered hydrogen bonds of an NH(+3)→CO() pair.
CD spectrum of BrBz(AibAc6c)2LValAibOMe in CH3CN at 25 ºC: [peptide] = 5.0 ×
104 M.
NH
O
O
HN
O
NH
O
O
HN
NH
O
O
HN
H
ONH
H H2
Fe2+ NH(+3)→CO() hydrogen bonding
Two free NHs
TEMPO
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1H1H NOESY (500 MHz) spectrum of FeII complex in CD3CN at thermodynamic
equilibrium state at 25 ºC: [] = 6.8 × 104 M; mixing time = 500 ms.
1H NMR (500 MHz) spectra of FeII complex in the absence () and presence () of
TBAC in CD3CN at room temperature: () [] = 6.6 × 104 M; () [] = 6.3 × 104 M, [TBAC] =
1.97 × 103 M.
= 76%
= 76%
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Top (left, from Cl–Fe–Cl axis) and side (right) views of the crystal structure of the
isomer of with Cl2 ([Fe()3]Cl2) drawing by space filling model. Cocrystallized solvent
molecules are omitted for clarity.
Variable temperature 1H NMR (500 MHz) spectra of Boc(AibAc6c)2LValAibOMe
in CD2Cl2: [peptide] = 3.0 × 103 M.
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1H NMR (500 MHz) spectra of FeII complex in the absence () and presence () of
TBAC in CD3CN at room temperature: () [] = 6.7 × 104 M; () [] = 6.4 × 104 M, [TBAC] =
1.9 × 103 M.
= 85%
> 98%
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, 1H1H NOESY (500 MHz) spectrum of FeII complex in CD3CN at thermodynamic
equilibrium state at 22 ºC: [] = 6.6 × 104 M; mixing time = 500 ms. , Expanded NOESY
spectrum of . , Graphical summary of the strong NOEs for in CD3CN. Arrows indicate the
observed strong NOEs between the protons. , Schematic representation of a rotation of the
bpy–amide bonds, which appears to be restricted and its equilibrium shifts to the righthand side
(see Fig S11b).
Broadening = Strong NOE
3,3’ 4,4’
6,6’
= NOEs between NH–N+1H
(BF4)22 (BF4)2
2
Fe2+ Fe2+
bpyOTg
N(1)
4,4’ 6,6’
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, 1H1H NOESY (500 MHz) spectrum of FeII complex with TBAC in CD3CN at
thermodynamic equilibrium state at 22ºC: [] = 6.4 × 104 M, [TBAC] = 1.8 × 103 M; mixing
time = 500 ms. , Expanded NOESY spectrum of complex with TBAC. , Graphical summary
of the strong NOEs for with TBAC in CD3CN. Arrows indicate the observed strong NOEs
between the protons. , Schematic representation of the restricted rotation of the bpy–amide bonds
in the presence of Cl– anions.
(Cl)22
Fe2+ Fe2+
4,4’
6,6’
= Strong NOE
3,3’ 4,4’
6,6’
= NOEs between NH–N+1H
bpyOTg
N(1)
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1H NMR (500 MHz) spectrum of FeII complex in CD3CN at room temperature: []
= 6.6 × 104 M.
0 20 40 60 80 100
0
10
20
30
40
50
60
70
80
90
[D]/([D] + []) x 100 (%)
CD
(mde
g) a
t 332
nm
Observed CD intensity Calculated CD intensity changes
= = 1 = 1, = 0.81 = 1, = 0.70 = 1, = 0.50 = 0.54, = 0.38 = = 0
Plots of the observed (●) and calculated CD intensity changes at 332 nm with variable
( and ) as a function of Dcontents. See Fig. S17 for more detailed simulation procedures.
, = at the metal center = θCo(D)2()/θCo(D)3
( × 100 = of Co(D)2()) = θCo(D)()2/θCo(D)3
( × 100 = of Co(D)()2) 0 ≤ ≤ ≤ 1
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S38
Schematic illustrations of the ligand exchange reactions of Co(D)3 and Co()3 and
summary of the simulation results for chiral amplification at the metal centers and in the ligand
during the formation of optically active metal complexes Co(D)2() and Co(D)()2.
Molar ratio α β γ δ
θ332 (mdeg) 92.5 α 92.5 β 92.5 γ 0 (%) 100 100 ( = 1) 81 ( = 0.81) 0
θ213 (mdeg) 11.6 α 11.6 β 11.6 γ 0
of all ligands (%) 100 90 ± 10 ( = 0.9 ± 0.1)
46.5 ± 3.5 ( = 0.465 ± 0.035) 0
of ligand (%) ─ = 70 ± 30 = 20± 5 0
ΛCo(D)3 ΛrichCo(D)2() ΛrichCo(D)()2 /ΛCo()3
ΛΛΛΛ
ΛΛΛΛ
ΛΛΛΛ
ΛΛΛΛ
Mixing Dwith
Ligand exchange
[D]/[] = 8/2 – 2/8 [D] + [] = const.
= ()Helix = ()Helix Λ= Λdiastereomer = diastereomer Helixsense excess (%); = {[]–[]}/{[]+[]} x 100 Diastereomeric excess (%); = {[Λ]–[]}/{[Λ]+[]} x 100
( ~ 100)
( = 0)
atthe metal center
of the all peptide ligands
Helixsense excess of the ligand
D: Λ[Co(D)3](NO3)2 ΛΛΛΛ
(= 100) ( = 100)
Co(D)3
Ligand D
: (/Λ)[Co()3](NO3)2 ΛΛΛΛ
(= 0) ( = 0)
Co()3
Ligand
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CD (upper) and absorption (bottom) spectral changes of the ligand D in the presence of
increasing amounts of Co(NO3)2 salt in CH3CN at 25ºC: [D] = 4.3–4.2 × 104 M,
[D]/[Co(NO3)2] = 3/1–3/0.
The CD intensities of the mixture at 213 nm reflect the of the helixsense excess of the peptide
chains. This assignment was done based on the CD titrations of the ligand D with CoII (Fig. S18),
which exhibited a clear isodichroic point at 213 nm in the peptide chromophore region due to the
coordination of the free ligand D composed of the ()peptides to CoII. This means that the CD
intensity at 213 nm for the mixtures of D and racemic should linearly increase with the
increasing content of D in Fig. 5b, if the preferredhanded helix could not be induced in the
dynamically racemic helical peptide chains ((Aib)) in the ligand.
250 300 3500
1
2
Wavelength (nm)
Abso
rban
ce
40
20
0
20
40
60
80
100
CD
(mde
g) 3 / 1 3 / 0.67 3 / 0.33 3 / 0
[D] / [CoII]
Isodichroic point at 213 nm
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0 20 40 60 80 100
0
5
10
[D]/([D] + []) x 100 (%)
CD
(mde
g) a
t 213
nm
Observed CD intensity Calculated CD intensity changes
' = ' = 1' = 1, ' = 0.43' = 0.92, ' = 0.47' = 0.80, ' = 0.50' = 0.70, ' = 0.40' = 0.67, ' = 0.33
Plots of the observed (●) and calculated CD intensity changes with variable (’ and
’) at 213 nm as a function of D contents. See Fig. S17 for more detailed simulation procedures.
’, = of all peptide ligands. ’ = θCo(D)2()
(213)/θCo(D)3(213)
(’×100 = of Co(D)2()) ’= θCo(D)()2
(213)/θCo(D)3(213)
(’×100 = of Co(D)()2)0.67 ≤ ≤ 1, 0.33 ≤ ≤1 ( ≥ )
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ORTEP drawing of the crystal structure of the isomer of the FeII complex Cl2
([Fe()3]Cl2) with thermal ellipsoids at 50% probability. Hydrogen atoms are omitted for clarity.
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