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Supplementary information for Manuresheds: Advancing nutrient recycling in US agriculture 1
Supplementary information for
Manuresheds: Advancing nutrient recycling in US agriculture
Sheri Spiegala⁎, Peter J.A. Kleinmanb, Dinku M. Endalec, Ray B. Bryantb, Curtis Dellb, Sarah
Gosleeb, Robert J. Meinend, K. Colton Flynne, John M. Bakerf, Dawn M. Browninga, Greg
McCartyg, Shabtai Bittmanh, Jennifer Carteri, Michel Cavigellig, Emily Duncanj, Prasanna
Gowdak, Xia Lil, Guillermo E. Ponce-Camposm, Raj Cibinn, Maria L. Silveirao, Doulas R. Smithe,
Dan K. Arthurb, Qichun Yangp a United States Department of Agriculture - Agricultural Research Service (USDA-ARS) Jornada Experimental Range, Las Cruces, NM 88003, USA bUSDA-ARS Pasture Systems and Watershed Management Research Unit, University Park, PA 16802, USA c USDA-ARS Southeast Watershed Research Laboratory, Tifton, GA 31793, USA d Department of Animal Science, Penn State University, University Park, PA 16802, USA e USDA-ARS, Grassland Soil and Water Research Laboratory, Temple, TX 76502, USA f USDA-ARS Soil & Water Management Unit, St. Paul, MN 55108, USA g USDA-ARS Beltsville Agricultural Research Center, Beltsville, MD 20705, USA h Agriculture and Agri-Food Canada, Agassiz, BC V0M 1A0, Canada i USDA-ARS, Northern Great Plains Research Laboratory, Mandan, ND 58554, USA j California Water Board, Los Angeles, CA 90013, USA k USDA-ARS, Southeast Area, Stoneville, MS 38776, USA l USDA-ARS Hydrology and Remote Sensing Laboratory, Beltsville, MD 20742, USA m The University of Arizona, Tucson, AZ 85721, USA n Agricultural and Biological Engineering, Penn State University, University Park, PA 16802, USA o University of Florida, Range Cattle Research and Education Center, Ona, FL 33865, USA p School of Engineering, University of Melbourne, Melbourne, Parkville 3010, Australia
1: Data aggregation and processing
1.1 Data sources and preparation
We aggregated data from the Nutrient Use Geographic Information System (NuGIS;
IPNI, 2012) and the 2012 United States Census of Agriculture (USDA-NASS, 2014) to estimate
county-level agricultural P and N for the 3109 counties of the contiguous United States, classify
the counties for their potential to supply or use surplus manure nutrients, and delineate
manuresheds for the year 2012. Table S1 contains details about data sources and data processing
for the analyses.
Supplementary information for Manuresheds: Advancing nutrient recycling in US agriculture 2
Table S1. Details about data used in the county classification and manureshed analyses
Variable Source Processing
P, N in manure
produced by confined
livestock
IPNI NuGISa
for the year
2012
NuGIS variables: Tons_P2O5_Recovered, Tons_N_Recovered. IPNI used a combination of USDAc
livestock inventory and sales data for 2012, and supporting publications, to estimate the annual volume of
manure generated by livestock in confinement, by county, and then applied coefficients to estimate the
amount of nutrient from excreted manure. IPNI used a multi-step approach to in-fill undisclosed USDA
data entries. Losses from spillage, volatilization (N only), and denitrification (N only) were accounted for.
Our conversions: P2O5 to P (conversion factor 0.4364); tons to tonnes (conversion factor 1.10231).
Fertilizer P, N applied to
farmland
NuGIS variables: Farm_TonsP2O5, Farm_TonsN. IPNI used reports by the Association of American Plant
Food Control Officials (AAPFCO) and an interpolation method involving county cropland area to estimate
farm application. Our conversions: P2O5 to P; tons to tonnes.
P, N removed by crops
and forages
NuGIS variables: Tons_P2O5_Rem, Tons_N_Rem. IPNI used crop nutrient removal coefficients of land
grant universities with USDA production values of harvested cropland in 2012. Estimates represented 21
common US crops: alfalfa, apples, barley, dry beans, canola, corn for grain, corn for silage, cotton, other
hay, oranges, peanuts, potatoes, rice, sorghum, soybeans, sugar beets, sugarcane, sunflower, sweet corn,
tobacco, and wheat. As of 2012, those 21 accounted for 78% of total cropland area in the contiguous states;
92% and 96% in Iowa and Illinois, respectively. In states with major areas of specialty crops (e.g.,
California, Florida), the percentage dropped to 48% and 51%. Our conversion: P2O5 to P; tons to tonnes.
N fixation NuGIS variable: Tons_N_Fixed_Legumes. Represents N fixed by peanuts, soybeans, and/or alfalfa per
county.
Total croplandc NuGIS variable: TotalCropland. NuGIS reported county-level values from the 2012 Census of Agriculture.
Our conversion: acres to hectares (conversion factor 0.404686). Used for county classification (Table 1).
Harvested croplandc NuGIS variable: Total_Harvested_Cropland_Acres. NuGIS reported county-level values from the 2012
Census of Agriculture. Our conversion: acres to hectares. We used this variable as the denominator for the
data in Figure S1 and Table S3.
P, N in manure
produced by confined
hogs, poultry, dairy
cattle, and beef cattle
2012 US
Census of
Agriculturec
We downloaded 13 inventory and sales data Items for confined livestock from the 2012 Census of
Agriculture, then used coefficients and equations provided by Kellogg et al. (2014) to aggregate the data to
county-level, livestock-specific animal units (AU), then to tonnes of wet weight of manure produced by the
AUs (accounting for losses from collection), and ultimately to tonnes of manure P and N available for
recycling after accounting for losses from spillage, volatilization (N only), and denitrification (N only). We
did not in-fill undisclosed data entries from USDA-NASS. Details in supplement 1.2. a Nutrient Use Geographic Information System (IPNI, 2012) b US Department of Agriculture – National Agricultural Statistics Service (USDA-NASS, 2014) c Includes land used for hay and silage crops
Supplementary information for Manuresheds: Advancing nutrient recycling in US agriculture 3
1.2 Industry-specific manure nutrients
We used data from the 2012 United States Census of Agriculture (USDA-NASS, 2014)
and coefficients from Kellogg et al. (2014) to identify the contributions of specific industries to
the county-level estimates of total manure P and N in NuGIS (IPNI, 2012).
We began by downloading 13 inventory and sales data items from the 2012 Census of
Agriculture in April 2019 for hogs, broilers, layers, pullets, turkeys, dairy cows, and beef cattle
on feed. In total, 3052 counties in the contiguous US (out of 3109) were represented in the 13
inventory and sales data items (Table S2). All 13 data items included entries with undisclosed
values – assigned a “(D)” to denote that numeric values were “Withheld to avoid disclosing data
for individual farms.” (D)’s were reported in lieu of either a total per county or for one or more
“domain categories” per county (domain categories were used to split county inventory and sales
by operation size class). We considered different approaches to in-fill the missing data, for
example, by finding a total inventory per state, calculating the difference between the state total
and disclosed county totals, and partitioning the difference into the counties with missing data.
However, as of the 2012 Census of Agriculture, NASS notified users that it included additional
instances of (D) to prevent imputation (USDA-NASS, 2014). Accordingly, we did not attempt to
in-fill missing data (as was done for manure estimates in NuGIS; Table S1). Instead, we omitted
the undisclosed entries from further analysis. Inventory or sales in counties with all undisclosed
entries was set to zero. For counties with numeric values in domain categories, we summed those
values and assigned the sum as the value for the entire county. On average, about one-third of the
counties within each data item were “zeroed out” because of undisclosed data (Table S2).
However, we were able to calculate positive, non-zero values for at least one industry in 2990
counties – 98% of the 3052 counties represented in the initial data download.
Supplementary information for Manuresheds: Advancing nutrient recycling in US agriculture 4
Table S2. Data used to calculate industry-specific manure phosphorus (P) and nitrogen (N), with counts of data
records available for analysis as our calculation progressed.
Industry Livestock
type
Census of Agriculture Data Item Counties
with
entries,
numeric or
(D)
Counties
with at
least one
numeric
entry
Counties
with
AU > 0
Counties
with
AU > 12
Counties with
manure P, N >
0 b
Hogsa Hogs Hogs, inventory 2889 1966
2277 1146 1146 Hogs, Sales, Measured in Head 2827 1879
Poultry
Broilers Chickens, Broilers – Inventory 2714 2095
2195 507
964
Chickens, Broilers – Sales, Measured in Head 2367 1626
Layers Chickens, Layers – Inventory 3031 2657
2657 634 Chickens, Layers - Sales, Measured in Head 2915 2268
Pullets Chickens, Pullets, Replacement – Inventory 2628 1884
2065 270 Chickens, Pullets, Replacement – Sales, Measured in Head 2347 1111
Turkeys Turkeys – Inventory 2409 1659
1727 180 Turkeys - Sales, Measured in Head 1655 823
Dairya Dairy cows Cattle, Cows, Milk – Inventory 2499 1553 1553 1345 1345
Beefa Beef cattle
on feed
Cattle on Feed, Inventory 1728 870 1239 1190 1190
Cattle, on Feed - Sales for Slaughter, Measured in Head 2056 1152 a Contained domain categories per county b After accounting for losses from collection, spillage, volatilization (N only), and denitrification
(N only)
Supplementary information for Manuresheds: Advancing nutrient recycling in US agriculture 5
Proceeding with the analysis on the numeric, county-level values, first we calculated
animal units1 (AU) for each of the seven livestock types, as an average per county across 2012
(Kellogg et al., 2014 Table 1, Table 2, Equation 1, Equation 5). In some counties, there was a
numeric estimate for inventory but not sales, or vice versa. In such cases, only inventory (or
sales) were used to calculate AUs (Table S2).
Next, retaining only the 2225 counties that supported twelve or more AUs of a livestock
type in 2012, we calculated the wet weight of manure as excreted by each livestock type
(Kellogg et al., 2014 Table 5). The 12 AU threshold was suggested by Kellogg and co-authors,
with the rationale that livestock types with fewer than 12 AU in a county likely represent only
very small or specialty operations which are not practical candidates for manure export. For the
AU to wet weight calculations, we used coefficients for hog farrow to finish and turkeys for
slaughter, as the 2012 Census of Agriculture did not differentiate type of hog for slaughter (e.g.,
finish only vs. farrow to finish) or type of turkey (e.g., turkeys for slaughter vs. turkeys for
breeding) (following Kellogg et al., 2014). Next, we applied a “recoverability factor” to the wet
weight of excreted manure for each livestock type, using the average of regional and farm size-
class estimates for each livestock type (Kellogg et al., 2014 Table 9).
Finally, we calculated the manure P and N per livestock type which was available for
land spreading or other uses, by first calculating tonnes of manure P and N in the manure that is
routinely collected and removed from built areas where livestock are held (Kellogg et al., 2014
Table 5), and then subtracting the portion of P and N lost to volatilization (N only),
denitrification (N only), and spillage (Kellogg et al., 2014 Table 10). We then summed manure
nutrient estimates for all the poultry livestock types (broilers, layers, pullets, and turkeys) for an
aggregated poultry estimate per county. Results of the calculation for manure P are illustrated in
Figure 1b, and were used to characterize the four manuresheds in the main article (Table 3,
Figure 4).
1 Animal units (AU), like livestock units (LU), are used to compare abundance of animals across species or categories.
AUs are also used to estimate forage consumption by animals of different species or size classes. An AU is typically
considered to be one mature cow (1000 lb, 455kg) either dry or with a 0-6 month-old calf, with an average daily forage
consumption of 15 kg of dry matter. One LU is typically considered to be equivalent to 500kg liveweight of an animal
category (Pain and Menzi, 2011).
Supplementary information for Manuresheds: Advancing nutrient recycling in US agriculture 6
2: County classification
2.1 County classification presented as an areal concentration
The 3109 counties of the contiguous United States were classified progressively (Table 1)
as sources, sinks, or candidates for within-county transfers, using county-level estimates for P
and N derived from NuGIS. In the main article, we presented the county classification in terms
of tonnes of nutrient per county (Figure 3) – the same unit used for the manureshed delineation
(Figure 4). However, we recognize that presenting the county classes in terms of nutrient mass
per unit of land can aid interpretation. Accordingly, here we present results of the classification
in terms of kilograms of P or N per hectare of harvested cropland per county (Figure S1; Table 3;
data available at Spiegal et al., 2020). Hectares of harvested cropland in 2012 – which includes
haylands and other harvested grazinglands – were obtained from the NuGIS database (see Table
S1 for details about the variable). For the counties with zero hectares of harvested cropland, we
set the value of harvested cropland to 1 ha to avoid undefined values when dividing the county’s
nutrient mass by its hectares of harvested cropland. County-level values (in kg P ha-1 or kg N ha-
1) were rounded to 2 places before performing the classification.
Notably, the classification rules (Table 1) classified counties as sinks, sources, or
candidates for within-county transfers regardless of whether tonnes per county of kg ha-1 per
county were used for input variables (compare Figure 3 and Figure S1). For P, only one county
differed in its class between the two analyses: Kankakee County, Illinois was a sink for manure P
due to P fertilizer surplus when P was expressed as tonnes, but it was a candidate for within-
county transfers when the classification was conducted in terms of kg P ha-1. Kankakee County
had a very low margin of fertilizer surplus (0.36 t), and when that surplus was divided by
harvested cropland (129,648 ha), the surplus rounded to 0 – changing the county from a fertilizer
surplus county to a candidate for within-county transfers of manure nutrient (see Table 1). This
example indicates the sensitivity of the classification for values near zero.
As expected, depending on the unit used, many counties within each class shifted from
below the median to above the median (compare Figure 3 and Figure S1). For instance, when
classified in terms of kg P ha-1 harvested cropland, the manure P source county of Otero County,
New Mexico had surplus manure P above the median (Figure S1a); however, when classified on
the basis of tonnes P, Otero County’s surplus manure P was below the median (Figure 3). This
was due to low extents of harvested cropland in Otero County reported for 2012.
Supplementary information for Manuresheds: Advancing nutrient recycling in US agriculture 7
Figure S1. Counties classified with respect to manure nutrient source and sink potential for a)
phosphorus (P) and b) nitrogen (N), in terms of kilograms per hectare per county in 2012. Each
class’s shade of color (lighter vs. darker) represents a split at the median value of the class. See
Figure 3 for maps in terms of tonnes of P and N per county.
Supplementary information for Manuresheds: Advancing nutrient recycling in US agriculture 8
Table S3. Amounts of agricultural nitrogen (N) and phosphorus (P) in county classes in 2012,
with counties classified with respect to kilograms of nutrient per hectare of harvested cropland
per county. Mean and standard deviation are followed by the range in parentheses. See Table 2
for summary statistics in terms of tonnes per county.
N (kg ha-1) P (kg ha-1) N:P ratioa
Manure P source counties (390 counties)
Nutrient in manureb 538 ± 6072
(0 – 118420)
255 ± 2367
(8 – 44710)
2.0 ± 0.5
(0.07 - 4.2)
Fertilizer nutrient applied to farmland 182 ± 870
(0 – 15374)
19 ± 68
(0 - 1232)
9.8 ± 4.0
(2.1 –25.5)
Nutrient removed by cropsc,d 90 ± 37
(0 - 506)
18 ± 8
(0 - 91)
5.2 ± 1.1
(1.0 - 8.4)
Manure P sink counties due to P deficit (1642 counties)
Nutrient in manure 5 ± 10
(0 - 334)
3 ± 5
(0 - 155)
1.9 ± 3.1
(0.04 – 96.0)
Fertilizer nutrient applied to farmland 76 ± 57
(2 - 821)
9 ± 5
(0 - 30)
9.2 ± 8.8
(1.0 – 171.6)
Nutrient removed by crops 83 ± 25
(16 - 391)
20 ± 8
(8 -242)
4.3 ± 1.1
(1.0 - 8.4)
Manure P sink counties due to fertilizer P surplus (674 counties)
Nutrient in manure 5 ± 7
(0 - 48)
3 ± 4
(0 - 29)
1.6 ± 0.7
(0.4 – 9.3)
Fertilizer nutrient applied to farmland 234 ± 370
(23 - 6544)
34 ± 40
(9 - 520)
7.0 ± 3.5
(0.6 – 40.9)
Nutrient removed by crops 75 ± 28
(18 -229)
18± 5
(7 - 44)
4.3 ± 1.3
(1.4 - 8.5)
Candidates for within-country transfers of P (303 counties)
Nutrient in manure 16 ± 13
(0 - 80)
9 ± 6
(0 - 33)
1.7 ± 0.7
(0.5 – 7.0)
Fertilizer nutrient applied to farmland 106 ± 48
(13 - 289)
15 ± 6
(2 - 30)
7.8 ± 3.0
(2.3 - 20.8)
Nutrient removed by crops 81 ± 25
(28 - 186)
20 ± 6
(8 - 37)
4.3 ± 1.1
(0.9 - 8.4) a Counties with values of zero for N or P were not included. b Produced by confined livestock and available after accounting for losses from collection, spillage, volatilization (N
only), and denitrification (N only). c Includes forages. d N removed by crops = N removed by crops – N fixation.
2.2 Evaluating the 0.5 N application factor
We used 0.5 for the N manure and fertilizer terms in the county classification rules (Table
1) to account for losses of N due to nutrient use efficiencies. Average N use efficiencies for the
US are often in the range of 30-80% (e.g., Lasselletta et al., 2014; Swaney et. al., 2018). To
capture the central tendency, we selected the factor of 0.5. Here, we sought to determine how the
Supplementary information for Manuresheds: Advancing nutrient recycling in US agriculture 9
count and composition of manure N source counties changed when different N availability
factors were used.
When the factor was set to 0.3, N manure source counties numbered 55. When it was set
to 0.5, there were 100 N manure source counties. And, when the factor was set to 0.8, 162 N
manure source counties were found. For each of these factors, N source counties were
completely nested (i.e., all 55 source counties identified when the factor was set to 0.3 were also
source counties when the factor was set to 0.5 and 0.8; all 100 source counties identified when
the factor was set to 0.5 were also source counties when the factor was set to 0.8).
Importantly, this sensitivity analysis indicated that using P sources and sinks to drive
manureshed determination was justified at all three factor levels: 0.3, 0.5, and 0.8. This is
because when we set the N use efficiency factor to 0.5, only one county was classified as a
source of manure N, but not as a source for manure P. When we set the factor to 0.8, only three
counties were manure N sources but not manure P sources: Clark County, Nevada; Nye County,
Nevada; Bernalillo, New Mexico – three counties with cropland dominated by alfalfa hay
production (Figure 1a) that had N-fixation sufficient to render manure N in excess of cropland
assimilative capacity when N use efficiency was set to 0.8. We concluded that because the
majority of N source counties were also P source counties at all three factor levels, using the N
use efficiency factor of 0.5 would not result in a critical loss of information about source
counties for manure N when delineating manuresheds based on manure P. Considering these
results, we felt that using the factor of 0.5 was adequately justified.
2.3 Evaluating the NuGIS estimates
We encountered a few surprises in the county-level estimates of P and N in NuGIS (IPNI,
2012). For instance, when county-level crop P removal was expressed as kilograms per hectare
of harvested cropland per county class (e.g., Table S3), removal estimates were lower than
published values for many common row crops (e.g., Pierzynski and Logan, 1993). Per NuGIS
developers (pers. comm. Heidi Peterson, Sand County Foundation), this may have been due to
the complexity of generalizing P removal rates across multiple crops in a given county. In
addition to common commodity crops, there may have been be some crops with lower P
demands in 2012.
Supplementary information for Manuresheds: Advancing nutrient recycling in US agriculture 10
In contrast to the estimates for P, in the case of N, county-level N balances pointed to a
high number of surprising N deficits, notably in areas of intensive crop production where one
would not expect farmers to under-apply N fertilizer relative to crop demand. While our
assignment of a 50% N use efficiency may have contributed to this result, we did identify some
potential for errors in accounting that may have contributed to our high number of N deficit
counties. For example, in dryland wheat-fallow rotations of the western US (e.g., the Palouse
region of Washington State), we found that land that was in reality fallowed in 2012 was
misclassified by NASS as being in wheat production – with P removal rates in NuGIS reflecting
wheat instead of fallow (Figure 3; Figure S1). In its documentation about NuGIS, IPNI (2012)
acknowledged some uncertainty in their own deficit estimates because of such issues, but they
also concluded that their estimates reveal real, emerging trends in nutrient management that
reflect greater growth in crop demand relative to fertilizer application.
A third issue encountered in NuGIS was that several counties with low areal extents of
cropland were estimated to have received high levels of P and N farmland fertilizer in 2012 (e.g.,
San Francisco County, California; New Hanover County, North Carolina). Per NuGIS
developers (pers. comm. Heidi Peterson, Sand County Foundation), this was a known but
unresolved issue as these counties tended to represent urban areas. In light of this issue, we opted
to remove counties with < 500 ha of cropland from further classification – after classifying
manure sources (Table 1) – in part to avoid spurious classification of counties as potential sinks
due to fertilizer surplus.
3: Quantitative evaluation of counties selected for manureshed
delineation
3.1 Cluster analysis to assess industry composition of manureshed source areas
We used cluster analysis to assess the composition of livestock industries in the source
areas of the four example manuresheds, to ensure accurate description of each manureshed
(Figure 4). Counties included in the cluster analysis were the 345 counties classified as manure P
source counties for which we had industry-specific estimates of manure P production. Manure P
was expressed in terms of areal concentration of manure P produced by each livestock industry
in each county (kg P ha-1 harvested cropland, Figure S1). We initially ran the analysis with
manure expressed in tonnes to match with the manureshed delineation, but the wide variation in
county size confounded results of this cluster analysis.
Supplementary information for Manuresheds: Advancing nutrient recycling in US agriculture 11
We tested twelve clustering algorithms of five types (hierarchical, partitioning, model-
based, density-based, and self-organizing), with number of clusters from 2 to 20. Model selection
and choice of cluster number was based on silhouette plots as well as visual inspection of the
clusters overlaid on a PCA ordination and a map of the 345 source counties. Silhouette plots with
higher mean values indicated better clustering of the observations being clustered (for
methodological explanation see Maechler et al., 2019). In the PCA plot and maps, we sought
coherence of clusters and unexpected outliers.
The 9-class k-means model performed optimally. Average silhouette width was 0.62, and
the PCA plot illustrated a coherence of cluster membership (silhouette and PCA plots are not
included here). Overall, we found that the clusters in the map of 345 source counties overlaid
with the source areas for the four manuresheds (Figure S2). This result supported our industry-
specific characterization of source areas in the four example manuresheds (Figure 4).
Figure S2. K-means cluster membership of manure phosphorus (P) source counties. Thick black
outlines represent source areas selected for the four manuresheds delineated in Figure 4.
3.2 Spatial autocorrelation of source and sink counties
In addition to the k-means cluster analysis (supplement 3.1), we also evaluated our
selection of manureshed source area counties (Figure 4) by quantitatively assessing whether they
were surrounded by counties that could assimilate excess manure P. To do so, we first calculated
the spatial autocorrelation of surplus manure P and manure P sink strength in the ten-county
Supplementary information for Manuresheds: Advancing nutrient recycling in US agriculture 12
neighborhood surrounding each of the 3109 counties in the contiguous US. Spatial
autocorrelation was calculated with Global Moran’s I (Moran, 1950) and a bi-variate local
indicator of spatial autocorrelation (LISA; Anselin 1995). We then calculated the proportion of
the 106 source area counties that had significant local autocorrelation with sink strength in their
10-county neighborhoods. We deemed a proportion exceeding 66% to be adequate confirmation
that the counties we selected were indeed surrounded by counties with assimilative capacity of
manure P surplus – and thus were appropriate counties to use in our delineation of manuresheds.
Global Moran’s I and bi-variate LISA were computed in GeoDa software (Anselin,
2006), which grouped each county into one of four clusters based on its relationship with its 10
nearest neighboring counties (Anselin, 2006). We used a p-value threshold of 0.01 using 999
random iterations to denote deviation from random neighbor association.
To prepare our data for GeoDa, we first assigned the 3109 counties in the contiguous US
with values for the variables in the bi-variate LISA: 1) surplus manure P, and 2) manure P sink
strength. Manure P surplus was > 0 for the 390 source counties for manure P (browns in Figure
3a), and sink strength was > 0 for the 2317 sink counties for manure P (greens in Figure 3a). For
sink counties, surplus manure P = 0, and for source counties, manure P sink strength = 0. For
other classes of counties in our US county classification (i.e., counties excluded from further
classification due to low extents of cropland, and counties that were candidates for within-county
transfers of P; Figure 3a), values in both variables were zero.
Local Moran’s I for a county ranged from -1 to 1 and was based on relativized values for
the source and sink variables. A positive Moran’s I signified a direct relationship between the
county and its neighbors (i.e., a positive Moran’s I value would be assigned both to a county
with high surplus P surrounded by counties with high sink strength, and to a county
with low surplus surrounded by counties with low sink strength). Conversely, a negative
Moran’s I for a county indicated an inverse relationship with the county and its neighbors (i.e., a
negative Moran’s I value would be assigned to a county with low surplus P surrounded by
counties with high sink strength, and to a county with high surplus P surrounded by counties
with low sink strength). The expected value for a random association between the two variables
in a bi-variate LISA analysis is zero, and the stronger the direct or inverse relationship, the
greater the absolute value of the Moran’s I.
Supplementary information for Manuresheds: Advancing nutrient recycling in US agriculture 13
Of the 3109 counties, 1227 had significant direct or inverse relationships with their
neighboring ten counties – these counties were grouped into four clusters (counties colored with
reds and blues in Figure S3). One cluster contained 12 counties with high surplus manure P that
were surrounded by counties with high sink strength (dark red in Figure S3). Another cluster
contained 176 counties with high surplus manure P that were surrounded by counties with low
sink strength (light red in Figure S3). Another cluster of 647 counties had zero or low surplus
manure P and were surrounded by counties with low sink strength (dark blue in Figure
S3). Finally, 392 counties had zero surplus manure P surrounded by counties with high sink
strength (light blue in Figure S3).
Figure S3. Relationships of counties with significant local autocorrelation of surplus manure
phosphorus (P) and sink strength for P with their ten neighboring counties, per a bi-variate
Local Indicator of Spatial Autocorrelation (LISA) analysis. Thick black outlines represent source
areas selected for the four manuresheds delineated in Figure 4.
With regard to the 390 source counties for manure P, 244 had significant local
autocorrelation with sink counties in their 10-county neighborhoods; all 244 were in the first
Supplementary information for Manuresheds: Advancing nutrient recycling in US agriculture 14
three clusters in the legend of Figure S3 (dark red, light red, dark blue). Seventy-one of the 106
source counties selected for manureshed source areas had significant inverse relationships with
neighboring sink counties (dark and light red in counties contained in black polygons in Figure
S3). This independent, quantitative analysis indicated that 67% of the source counties selected
for manureshed delineations were indeed surrounded by counties that could potentially
assimilate surplus manure P – potentially from the source area counties. Thus, we proceeded to
use these selected source area counties for manureshed delineation (Figure 4).
References
Anselin, Luc. 1995. Local Indicators of Spatial Association — LISA. Geogr. Anal. 27, 93–115.
Anselin, L., Syabri, I., Kho, Y., 2006. GeoDa: An introduction to spatial data analysis. Geogr.
Anal. 38, 5-22. https://doi.org/10.1111/j.0016-7363.2005.00671.x.
IPNI, 2012. A Nutrient Use Information System (NuGIS) for the U.S. International Plant
Nutrition Institute, Norcross, Georgia. Available online at http://nugis.ipni.net/.
(Accessed tabular data on January 25, 2020).
Kellogg, R.L., Moffitt, D.C., Gollehon, N., 2014. Estimates of Recoverable and Non-
Recoverable Manure Nutrients Based on the Census of Agriculture. US Department of
Agriculture, Natural Resources Conservation Service, Resource Assessment Division,
Resource Economics and Analysis Division, Washington, D.C..
Lassaletta, L., Billen, G., Grizzetti, B., Anglade, J., Garnier, J., 2014. 50 year trends in nitrogen
use efficiency of world cropping systems: The relationship between yield and nitrogen
input into cropland. Environ. Res. Lett. 9, 105011.
Maechler, M., Rousseeuw, P., Struyf, A., Hubert, M., Hornik, K., 2019. Cluster: Cluster
Analysis Basics and Extensions. R package version 2.1.0.
Moran, P.A.P., 1950: Notes on continuous stochastic phenomena. Biometrika 37, 12-17.
Pain, B., Menzi, H., 2011. Glossary of Terms on Livestock and Manure Management 2011.
Recycling Agricultural, Municipal and Industrial Residues in Agriculture Network
(RAMIRAN).
Pierzynski, G.M., Logan, T.J., 1993. Crop, soil, and management effects on phosphorus soil test
levels: A review. J. Prod. Agric. 6, 513–520.
Supplementary information for Manuresheds: Advancing nutrient recycling in US agriculture 15
Spiegal, S., Kleinman, P.J., Endale, D.M., Bryant, R.B., Dell, C., Goslee, S., Meinen, R.J.,
Flynn, C., Baker, J., Browning, D., McCarty, G., Bittman, S., Carter, J., Cavigelli, M.,
Duncan, E., Gowda, P., Li, X., Ponce-Campos, G.E., Raj, C., Silveira, M., Smith, D.R.,
Arthur, D.K., Yang, Q., Nezat, C., Vandenberg, B. 2020. Manureshed delineation via
analysis of county-level data from IPNI-NuGIS and USDA-NASS (2012). Available
online at https://doi.org/10.15482/USDA.ADC/1518435.
Swaney, D.P., Howarth, R.W., Hong, B., 2018. Nitrogen use efficiency and crop production:
Patterns of regional variation in the United States, 1987-2012. Sci. Total Environ. 635,
498-511. https://doi.org/10.1016/j.scitotenv.2018.04.027.
USDA-NASS, 2014. 2012 United States Census of Agriculture. Census Full Report. National
Agriculture and Statistics Service Database. United States Department of Agriculture
Agricultural Statistics Board, Washington, DC.